LOCUS       NM_001001670            4830 bp    mRNA    linear   PRI 27-JUN-2021
DEFINITION  Homo sapiens SPATA31 subfamily D member 1 (SPATA31D1), mRNA.
ACCESSION   NM_001001670 XM_372120
VERSION     NM_001001670.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK128831.1 and AL355985.18.
            
            On May 17, 2019 this sequence version replaced NM_001001670.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK128831.1, DB093176.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000344803.3/ ENSP00000341988.2
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1660              AK128831.1         1-1660
            1661-2420           AL355985.18        28534-29293
            2421-4828           AK128831.1         2421-4828
            4829-4830           AL355985.18        31702-31703
FEATURES             Location/Qualifiers
     source          1..4830
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
                     /map="9q21.32"
     gene            1..4830
                     /gene="SPATA31D1"
                     /gene_synonym="FAM75D1"
                     /note="SPATA31 subfamily D member 1"
                     /db_xref="GeneID:389763"
                     /db_xref="HGNC:HGNC:37283"
     exon            1..233
                     /gene="SPATA31D1"
                     /gene_synonym="FAM75D1"
                     /inference="alignment:Splign:2.1.0"
     CDS             48..4778
                     /gene="SPATA31D1"
                     /gene_synonym="FAM75D1"
                     /note="FAM75-like protein FLJ46321; protein FAM75D1;
                     family with sequence similarity 75, member D1"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 31D1"
                     /protein_id="NP_001001670.1"
                     /db_xref="CCDS:CCDS47986.1"
                     /db_xref="GeneID:389763"
                     /db_xref="HGNC:HGNC:37283"
                     /translation="MENILCFLNSYTETGLSPDSHWLDIDPNFICLSGLGLFILYLFY
                     VVLTLYSSPTEKNNDIQKHQGRAKRRRKGGTFKGFPDWKSFQREEEEERKLLSLLKSF
                     GPPVSCSPRGQHHDTNHFRRLLCPDPVCRVCKRATADIQQLLSWESLKDAAPSVSPLA
                     SSASATESSFTLASTPSATPPEDLILSPRPKASPPPPLILSPDLITTLADLFSPSPLR
                     DPLPPQPVSPLDSKFPIDHSPPQQLPFPLLPPHHIERVESSLQPEASLSLNTIFSFGS
                     TLCQDISQAMNPIDSCARHHGPPIPSALPPEDCTVTQSKSSLTILKTFPEMLSLGGSG
                     GSSTSAPTIKGIDHSHLASSEFTWWQPHAKDSFSSNFVPSDFMEELLTLHSSEAFLGG
                     HSVANLIEPVNISFLSHDILALLERQVKKRGDFLMWKENGKKPGSFPKQLRPNYQLNS
                     SRNMLTSIAVKHDLAESFPFWASKGKLEWQHIHQQPPHSKCFEDHLEQKYVQLFWGLP
                     SLHSESLHPTVLVQRGHSSMFVFFNGITNTSISHESPVLPPPQPLSLPSTQPLPLPQT
                     LPQGQSPHLTQVKSLAQPQSPFRALLPSPLFLIRICGVCFHRPQNEARSLLPSEINHL
                     EWNVLQKVQESLWGLPSVVQKSQEDFCPPAPNPELVRKSFKVHVPISIIPGDFPLSSE
                     VRKKLEQHIRRRLIQRRWGLPRRIHESLSLLRPQSKISELSVSERIHGPLNISLVEGQ
                     RCNVLKKSASSFPRSFHERSSNMLSMENVGNYQGYSQETVPKDHLLHGPETSSDKDLR
                     SNSERDLETHMMHLSGNDSGVRLGQKQLENALTVRLSKKFEEINEGRMPGTVHSSWHS
                     VKQTMSLPEKSHSQIKHRNLVTLVSEDHCVDTSQEISFLSSNKQKMLEAHIKTFRMRM
                     LWGLPLKVLESIEIFKSKADLSTSFSHFDLPSSATFISQGDSKDGVSKSRSRSTFQGE
                     KLGTTSSVPILDRPHPVSSPVVQEGQGTLRRQFSDTDHDLIETDSKDGASTSLRRGTT
                     DFQSEKLDSTSSFPILGHSYLVTSPVNQEKQGTLRREFSDTDNDLTESVRTTEDGRQT
                     FLPPPHSIVDEVSQKQTVLASRCSAELPIMQAGAGCESWDKRKSSFHNVDRLQGSRKT
                     FPVTNALQSQTRNNLTTSKSGSCSLTNVKASTSNETEIFPPRISVPQDPKSSYLKNQM
                     LSQLKLVQRKHSQPQSHFTDMSFALDNLSSKDLLTNSQGISSGDMGTSQVVHVHLEDS
                     GIRVAQKQEPRVPTCVLQKCQVTNFPPAVNRVSPVRPKGGELDGGDAGLGTSQRRRKS
                     LPVHNKTSGEVLGSKSSPTLKTQPPPENLFRKWMKTSLQWFNKPSISYEEQESSWEKG
                     SSLSSCVQNIGRVIRAAFTGTTEAQKIRKDTREFLEEKLGHRHGIDITCPQEPLSFPV
                     GLGKAQHNPEVHVRAEPVQGCPCNYRAPSCKVTRTKSCSQQAIFVGQNYPTRIRQIID
                     KDRQPQKVEAFKGKILCQSHPQSMPHRKPVPHPNPTCRRQVSLVCPAVPTSAKSPVFS
                     DVPFLTGQKMLPKHLQGGKFPPTK"
     exon            234..279
                     /gene="SPATA31D1"
                     /gene_synonym="FAM75D1"
                     /inference="alignment:Splign:2.1.0"
     exon            280..349
                     /gene="SPATA31D1"
                     /gene_synonym="FAM75D1"
                     /inference="alignment:Splign:2.1.0"
     exon            350..4830
                     /gene="SPATA31D1"
                     /gene_synonym="FAM75D1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4811..4816
                     /regulatory_class="polyA_signal_sequence"
                     /gene="SPATA31D1"
                     /gene_synonym="FAM75D1"
                     /note="hexamer: AATAAA"
     polyA_site      4830
                     /gene="SPATA31D1"
                     /gene_synonym="FAM75D1"
                     /note="major polyA site"
ORIGIN      
        1 ggcaccctca gtgctcagtt gcttcaggca gctgagctat tcagaccatg gagaatatcc
       61 tctgttttct gaacagctat actgagacag ggctgagccc tgactcacat tggttggata
      121 tcgaccccaa cttcatctgc ttgagtgggt tggggttgtt tatactgtac ttgttctacg
      181 tggtattgac cctgtattcg tcacccaccg aaaaaaataa tgacatccaa aagcatcagg
      241 gcagagccaa gaggagaagg aaaggtggga cattcaaagg tttcccagac tggaaaagtt
      301 tccagagaga agaggaagag gaaaggaagc tgctttctct tctgaaaagc tttggacctc
      361 ctgtttcctg cagtcctcgg ggccagcatc atgataccaa ccactttcgt cgactgttat
      421 gcccagaccc cgtctgtcgg gtgtgtaaga gagcaactgc tgatatccag caactgctgt
      481 cttgggagtc cctgaaagat gctgctccct ctgtgtcccc tttggcttct tcggcttctg
      541 cgactgagtc atcgttcact ctggcttcca ccccctcagc aacccctcca gaagacctaa
      601 tactgtcccc tcggcctaag gcctctccac cacccccctt aattctctca cctgacctga
      661 tcaccacctt agctgactta ttttcaccct caccactgag ggaccctctg ccaccacagc
      721 ctgtttctcc cttggattcc aagttcccca tagaccattc cccaccccaa cagcttccct
      781 ttccccttct cccaccacat cacattgaga gagtggagtc cagcctccaa cctgaagcca
      841 gtttgtctct gaacaccatc ttttcatttg gctccaccct atgccaagat atttcgcagg
      901 ccatgaatcc cattgattct tgtgctcgtc atcacggacc accaatccca tctgctttac
      961 caccggaaga ttgcactgtg actcagtcta aatcaagtct caccatcttg aagacttttc
     1021 cggaaatgtt atctctaggt ggctctggtg ggtcatccac ctctgcccca acaatcaaag
     1081 gcattgacca ttcacacctt gcatcttcag aattcacctg gtggcagcct catgccaagg
     1141 actctttttc ctctaatttt gtgccatctg atttcatgga ggagcttctt acccttcatt
     1201 cttctgaggc ctttttaggg gggcactctg tggccaacct catagagcct gttaacatct
     1261 catttctcag ccatgacatt ctggcactcc tggagagaca agtcaaaaaa aggggtgatt
     1321 tcctgatgtg gaaagaaaat ggaaagaaac caggatcatt cccaaaacaa cttaggccaa
     1381 actaccaact aaattcctca cggaatatgt taacctcaat tgctgttaag catgacttgg
     1441 cagaatcctt tcctttttgg gccagtaaag gcaaactaga atggcagcac atccatcagc
     1501 agcctccaca ctctaaatgc tttgaagacc atttagagca aaaatatgtc cagctcttct
     1561 ggggtctccc atctttgcac agcgagtctc tgcatcctac tgttcttgtc caacgtggcc
     1621 attcctccat gtttgtattc ttcaatggca ttacaaatac atctatatcc catgaatccc
     1681 cagtacttcc ccctccccaa cctctgtcct tgcctagtac ccaaccacta cccttgcctc
     1741 aaaccctgcc ccaaggtcag tccccacatc tcactcaggt gaagtccctg gctcaacctc
     1801 aatctccatt ccgagcccta ctacctagtc ctctattcct gattaggatc tgtggagtgt
     1861 gttttcatag accccagaac gaggcacggt ctcttttgcc atctgaaatt aaccatctgg
     1921 agtggaacgt gttgcagaaa gtgcaggaaa gtttgtgggg cttaccctct gtggttcaaa
     1981 aatcccagga agacttttgt cctccagctc ccaatcctga attggtcaga aagtccttca
     2041 aggtccatgt tccgatctcc atcattcctg gagattttcc actcagctct gaggtaagga
     2101 agaaactaga gcaacacatt cgaaggaggc tcatccagcg cagatggggc ctgccccgca
     2161 gaatccatga gtctctgtca ttgctacgtc ctcagagcaa aatttcagag ctatctgtgt
     2221 cagagagaat tcatggaccg ttaaatatct ctttggttga gggtcagagg tgcaatgttc
     2281 taaagaagtc cgcatcaagc ttccctagaa gcttccacga gaggagctca aatatgcttt
     2341 ccatggagaa tgtggggaat tatcagggat acagccagga gactgtccca aaagatcacc
     2401 tgttgcatgg tccggagact tcttcagaca aggatctgag gtctaactct gagagagacc
     2461 tagaaactca tatgatgcat ctgtcaggga atgactcagg ggtgagacta ggtcagaaac
     2521 aacttgaaaa tgccctgaca gtacgtttga gcaagaaatt tgaggaaatc aatgagggtc
     2581 gaatgcctgg gactgtgcat agttcatggc actcagtcaa gcagacaatg tctcttcctg
     2641 agaaatccca cagccaaatt aaacatcgaa atctggtaac attggtgagt gaggaccact
     2701 gcgttgatac ttcccaggaa atttccttcc ttagttccaa caaacaaaag atgttggaag
     2761 cccatattaa aactttccgt atgaggatgc tgtggggcct tcccctcaag gtccttgaat
     2821 ccatagaaat cttcaaatcg aaagcggacc tttccacttc cttttcccat ttcgaccttc
     2881 cctcctcagc caccttcatc tctcagggag attccaaaga tggggtctct aagtcccgta
     2941 gtcgaagcac ttttcaagga gaaaagttgg gaacaacaag ctcagtcccc atccttgatc
     3001 gtcctcaccc tgtctcctca cctgtcgtcc aagaagggca ggggaccctg agaagacaat
     3061 tttctgatac tgaccatgac cttatagaga cagattccaa agacggggcc tccacatccc
     3121 ttagaagagg tactacagat tttcaaagcg aaaaattaga ttcaacaagc tcattcccca
     3181 tcctcggtca ttcttacctt gtcacttcac ctgtcaacca agaaaagcag gggaccctga
     3241 gaagagaatt ctctgatact gacaatgatc ttacagaaag tgtccggaca acagaggatg
     3301 gcagacagac ttttctgccc ccgccacaca gcatcgtaga cgaagtcagt cagaaacaga
     3361 ctgtactggc cagtagatgc agcgcagagc tgcccataat gcaagctgga gctggctgtg
     3421 agtcatggga taagagaaag agttcctttc ataatgtaga caggcttcag ggcagtagaa
     3481 agacctttcc tgtcaccaat gctcttcaat cacaaactag gaacaacttg acaaccagca
     3541 agtcaggaag ctgctcactg acaaatgtga aagcaagcac ttccaatgaa actgaaattt
     3601 tcccaccaag aatatcagtt cctcaagatc ctaaatcatc ataccttaaa aatcagatgt
     3661 tgagccagtt aaagttggtc cagaggaagc atagccaacc tcagagccat ttcactgaca
     3721 tgtcttttgc cttagataac ttgagttcca aggacttact gactaattcc cagggcatct
     3781 cgagtgggga catgggaact tcccaggtgg tgcatgtcca cttggaggac agcggaatcc
     3841 gtgtggcaca gaagcaggag cccagggtcc ctacctgtgt cttacagaag tgtcaagtta
     3901 cgaatttccc accagctgta aacagagtga gtcctgtgag acccaaagga ggagagcttg
     3961 atggagggga tgcagggctg gggacatccc aacgcaggag aaagagcctc cctgttcata
     4021 acaagacatc aggggaggtg cttgggagca aatcttcccc aaccttgaaa acacagcctc
     4081 ctcctgaaaa ccttttcaga aaatggatga agacctcttt gcagtggttt aataaaccca
     4141 gcatatcata tgaagaacaa gaaagttcct gggaaaaggg tagctccctg tcatcatgtg
     4201 tgcagaatat tggtcgagtt ataagagctg cctttactgg gactactgaa gctcagaaaa
     4261 ttaggaaaga cactagggag ttcctagaag agaagctggg gcataggcat gggatagata
     4321 tcacctgtcc ccaagagccc ctttccttcc cagtggggct tgggaaagct cagcacaacc
     4381 cagaagtgca tgtcagagca gagcctgtcc agggctgtcc ctgcaactac agggctccct
     4441 cctgcaaagt gacacgtacc aaatcttgca gccaacaagc tatctttgtt ggccagaatt
     4501 atcctacaag gattagacag atcatagaca aggacagaca gccccagaaa gttgaggcat
     4561 ttaaggggaa gatactgtgt caaagccatc cccaatccat gccccacagg aagcctgtgc
     4621 cacatccaaa ccccacttgc cggcgtcagg tcagcctggt gtgtccagcc gtcccaacca
     4681 gtgctaaaag ccctgtgttt agtgatgtgc ctttcctaac tggacagaaa atgcttccaa
     4741 agcatttaca gggaggaaaa tttcccccca caaaataatt cactccttgt tgagaatctt
     4801 gattctcccc aataaatgtt ccaataagaa
//
