LOCUS       NM_001145196            4214 bp    mRNA    linear   PRI 01-FEB-2024
DEFINITION  Homo sapiens SPATA31 subfamily A member 6 (SPATA31A6), mRNA.
ACCESSION   NM_001145196 XR_041504 XR_041505 XR_041506 XR_041507
VERSION     NM_001145196.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4214)
  AUTHORS   Zuo,Y., Gao,J., Yeung,W.S. and Lee,K.F.
  TITLE     The testis-specific VAD1.3/AEP1 interacts with beta-actin and
            syntaxin 1 and directs peri-nuclear/Golgi expression with bipartite
            nucleus localization (BNL) sequence
  JOURNAL   Biochem Biophys Res Commun 401 (2), 275-280 (2010)
   PUBMED   20850414
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL445584.16.
            
            On or before Feb 15, 2009 this sequence version replaced
            XR_041505.1, XR_041506.1, XR_041507.1, XR_041504.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2148874 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000332857.7/ ENSP00000329825.6
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-218               AL445584.16        27932-28149
            219-276             AL445584.16        29342-29399
            277-337             AL445584.16        29968-30028
            338-4214            AL445584.16        30284-34160
FEATURES             Location/Qualifiers
     source          1..4214
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
                     /map="9p11.2"
     gene            1..4214
                     /gene="SPATA31A6"
                     /gene_synonym="FAM75A6"
                     /note="SPATA31 subfamily A member 6"
                     /db_xref="GeneID:389730"
                     /db_xref="HGNC:HGNC:32006"
     exon            1..218
                     /gene="SPATA31A6"
                     /gene_synonym="FAM75A6"
                     /inference="alignment:Splign:2.1.0"
     CDS             30..4061
                     /gene="SPATA31A6"
                     /gene_synonym="FAM75A6"
                     /note="family with sequence similarity 75, member A6"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 31A6"
                     /protein_id="NP_001138668.1"
                     /db_xref="CCDS:CCDS75837.1"
                     /db_xref="GeneID:389730"
                     /db_xref="HGNC:HGNC:32006"
                     /translation="MENLPFPLKLLSASSLNAPSSTPWVLDIFLTLVFALGFFFLLLP
                     YLSYFHCDDPPSPSPGKRKCPVGRRRRPRGRMKNHSLRAGRECPRGLEETSDLLSQLQ
                     SLLGPHLDKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPILSPLASPDPQAK
                     HPQDLASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPEPPALFPHPPHTPDPLACSP
                     PPPKGFTAPPLRDSTLITPSHCDSVALPLGTVPQSLSPHEDLVASVPAISGLGGSNSH
                     VSASSRWQETARTSCAFNSSVQQDPLSRHPPETCQMEAGSLFLLSSDGQNVVGIQVTE
                     TAKVNIWEEKENVGSFTNQMTPEKHLNSLGNLAKSLDAEQDTTNPKPFWNMGENSKQL
                     PGPQKCSDPRLLQESFWKNYSQLFWGLPSLHSESLVANAWVTDRSYTLQSPPFLFNEM
                     SNVCPIQRETTMSPLLFQAQPLSHRQPFISSTPQFLPTPMAQAEAQAHLQSSFPVLSP
                     AFPSLIKNTGVACPASQNKVQALSLPETQHPEWPLLRKQLEGRLALPSRVQKSQDVFS
                     VSTPNLPQESLTSILPENFPVSPELRRQLEQHIKKWIIQHWGNLGRIQESLDLMQLRD
                     ESPGTSQAKGKPSPWQSSTSTGESSKEAQKVKFQLERDLCPHLGQILGETPQNLSRDM
                     KSFPRKVLGVTSEESERNLRKPLRSDSGSDLLRCTERTHIENILKAHMGRNLGQTNEG
                     LIPVRVRRSWLAVNQALPVSNTHVKTSNLAAPKSGKACVNTAQVLSFLEPCTQQGLGA
                     HIVRFWAKHRWGLPLRVLKPIQCFKLEKVSSLSLTQLAGPSSATCESGAGSEVEVDMF
                     LRKPPMASLRKQVLTKASDHMPESLLASSPAWKQFQRAPRGIPSWNDHGPLKPPPAGQ
                     EGRWPSKPLTYSLTGSTQQSRSLGAQSSKAGETREAVPQCRVPLETCMLANLQATSED
                     VHGFEAPGTSKSSLHPRVSVSQDPRKLCLMEEVVSEFEPGMATKSETQPQVCAAVVLL
                     PDGQASVVPHASENLVSQVPQGHLQSMPTGNMRASQELHDLMAARRSKLVQEEPRNPN
                     CQGSCKSQRPMFPPIHKSEKSRKPNLEKHEERLEGLRTPQLTPVRKTEDTHQDEGVQL
                     LPSKKQPPSVSHFGENIKQFFQWIFSKKKSKPAPVTAESQKTVKNRSCVYSSSAEAQG
                     LMTAVGQMLDKKMSLCHAHHASKVNQHKQKFQAPVCGFPCNHRHLFYSEHGRILSYAA
                     SSQQATLKSQGCPNRDRQIRNQQPLKSVRCNNEQWGLRHPQILHPKKAVSPVSPPQHW
                     PKTSGASSHHHHCPRHCLLWEGI"
     exon            219..276
                     /gene="SPATA31A6"
                     /gene_synonym="FAM75A6"
                     /inference="alignment:Splign:2.1.0"
     exon            277..337
                     /gene="SPATA31A6"
                     /gene_synonym="FAM75A6"
                     /inference="alignment:Splign:2.1.0"
     exon            338..4214
                     /gene="SPATA31A6"
                     /gene_synonym="FAM75A6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agttgcttga aagcaacgtg cctattcaca tggagaatct tccctttcct ttaaaattac
       61 ttagtgcctc atcgctaaac gcccccagct ccacaccatg ggtgttggat atcttcctca
      121 ccttggtgtt tgccctgggg ttcttcttcc tattactccc ctacttatct tacttccatt
      181 gtgatgaccc accctcacca tcgcctggga agagaaagtg tccagtaggg cggaggcgga
      241 ggcccagagg caggatgaaa aaccacagtc tgagagctgg tagagagtgc ccgagaggcc
      301 tggaggagac ttcggacctt ctttcacaac tgcagagcct cctggggcca caccttgaca
      361 aaggtgactt tggtcagctc tccggtccag accccccagg tgaggtgggc gaaagagcac
      421 ctgatggagc ctcccagtcc tctcatgagc ctatggaaga tgctgctccc attctctccc
      481 cgttagcttc cccggatcct caagccaagc atcctcagga tctggcctcc accccatcac
      541 caggcccaat gaccacctca gtctcctccc taagtgcctc ccagccacca gaaccttccc
      601 ttcccctaga acacccctca cccgagccac ctgcactttt ccctcaccca ccacacaccc
      661 ctgatcctct ggcctgctct ccgcctcctc caaaaggctt cactgctcct cccctgcggg
      721 actccacact gataactcca tctcactgtg actcagtggc acttccactg ggcaccgtcc
      781 ctcaaagctt gtctccacat gaggatttgg tggcttctgt cccagccatc tcaggccttg
      841 gtggctcaaa cagtcatgtt tctgcctcct cccggtggca ggagactgcc agaacctcgt
      901 gcgcctttaa ctcatcagtc cagcaagatc ctctttcccg ccacccacca gagacctgtc
      961 agatggaagc tggtagcctg tttttgctca gctctgatgg ccagaatgtc gtggggatac
     1021 aagtcacaga aacagccaag gtcaacattt gggaagaaaa agaaaatgtt ggatcattta
     1081 caaatcaaat gaccccagaa aagcacttaa attctttggg gaatttggct aaatcattgg
     1141 atgctgagca ggacaccaca aacccaaaac ccttctggaa catgggagag aactcgaaac
     1201 agctgcccgg acctcagaag tgctcagatc ctaggctctt gcaggaaagt ttttggaaga
     1261 attatagcca gcttttctgg ggcctcccct ctctgcacag cgagtccctg gtggctaacg
     1321 cctgggtaac tgacaggtct tatactttac agtctcctcc tttcttgttc aatgaaatgt
     1381 ccaatgtctg cccaattcaa agggagacta caatgtcccc actgcttttc caggcccagc
     1441 ccctgtccca ccgccaaccc tttatttcat ccacacccca attcctgccc acacctatgg
     1501 ctcaggccga ggctcaggcc catcttcagt cttctttccc agtcctatct cctgcttttc
     1561 catccctgat taagaacact ggagtagctt gccctgcatc gcagaataaa gtgcaagctc
     1621 tctccctacc tgaaactcag caccctgaat ggcctttgtt gaggaaacaa ctagaaggta
     1681 ggttggcttt accctctagg gtccaaaaat ctcaggacgt ctttagtgtc tccactccta
     1741 accttcccca ggaaagtttg acatccattc tgcctgagaa ctttccagtc agtcctgaac
     1801 tccggagaca actggagcaa cacataaaaa agtggatcat ccaacactgg ggcaacctgg
     1861 gaaggatcca agagtctctg gatctgatgc agcttcggga cgaatcacca gggacaagtc
     1921 aggccaaggg caaacccagt ccctggcagt cctccacgtc cacaggtgaa agcagcaagg
     1981 aggcacagaa ggtgaagttc cagctagaga gggacctgtg cccacatctg gggcaaattc
     2041 tgggtgagac cccacaaaat ctatccaggg acatgaaaag cttcccacgg aaggttctgg
     2101 gggtgacttc tgaggagtcg gaaaggaact tgaggaagcc cttgaggagt gactcgggaa
     2161 gtgatttatt aagatgcaca gagaggactc atatagaaaa catcctgaaa gcccacatgg
     2221 gcaggaactt gggccagacc aacgagggct tgatccccgt gcgtgtgcgt cgatcctggc
     2281 ttgctgtcaa ccaggctctt cccgtgtcca acacccatgt gaaaaccagc aatctagcag
     2341 ccccgaaaag tgggaaagcc tgtgtgaaca cagcccaggt gctttccttc ctcgagccgt
     2401 gtactcagca ggggttggga gcccatattg tgaggttttg ggccaaacac aggtggggtc
     2461 tacccctcag ggtcctcaag cccattcagt gctttaaact ggaaaaggtt tcatccttgt
     2521 cccttacgca gcttgctggt ccctcctcag ccacctgtga atctggggct ggctcagaag
     2581 ttgaggtgga catgttcctt agaaagccac caatggcaag tctgagaaag caggtgctga
     2641 ccaaagcatc tgatcacatg ccagagagtc ttctggcctc ctcacctgca tggaagcagt
     2701 tccagagggc accgcgagga atcccatctt ggaatgatca tgggcccttg aagcctcctc
     2761 cagctggaca ggagggcagg tggccatcta agcccctcac gtacagcctc acaggcagca
     2821 cccagcagag caggagctta ggagcccaat cttcaaaggc tggagagaca agggaggcag
     2881 tgccacaatg cagagtcccc ttggaaacct gtatgctggc aaacctccaa gccacaagtg
     2941 aggatgtgca tggtttcgag gctccaggga ccagcaaaag ctctctacac cctagagtgt
     3001 ctgtctccca agatccaaga aagctgtgtc ttatggagga ggttgttagt gaatttgagc
     3061 ctggaatggc cacaaagtca gagacccagc ctcaagtttg tgccgctgtt gtgctccttc
     3121 cagatgggca agcatctgtt gtgccccacg cttcagagaa tttggtttct caagtgcccc
     3181 agggccatct ccagagcatg cctactggga acatgcgggc ttcccaggag ctacatgacc
     3241 tcatggcagc cagaaggagc aaactggtgc aagaggagcc cagaaaccca aactgtcaag
     3301 gctcatgcaa gagccaaagg ccaatgtttc cccctattca caagagtgag aagtctagga
     3361 agcccaactt agaaaaacat gaagaaaggc ttgaaggatt gaggactcct caacttaccc
     3421 cagtcaggaa aacagaagac acccatcagg atgaaggcgt ccagctactg ccatcaaaga
     3481 aacagcctcc ttcagtaagc cactttggag aaaacatcaa gcaatttttt cagtggattt
     3541 tttcaaagaa aaaaagcaag ccagcaccag tcactgctga gagccaaaaa acagtaaaaa
     3601 acagatcatg tgtgtacagc agcagtgctg aagctcaggg tctcatgacg gcagttggac
     3661 aaatgctgga caagaaaatg tcactttgcc atgcgcacca tgcctcgaag gtaaatcagc
     3721 acaaacagaa gtttcaagcc ccagtctgtg ggtttccctg caaccacagg cacctcttct
     3781 actcagaaca tggcagaata ctgagctatg cagccagcag tcaacaagcc actctcaaga
     3841 gccagggttg tcccaacaga gacaggcaaa tcagaaatca acagcccttg aaaagtgtgc
     3901 ggtgcaacaa tgagcaatgg ggcctgcgac atccccaaat cttgcacccc aagaaagctg
     3961 tatccccagt cagtccccct cagcactggc cgaagacatc cggtgcctct agccaccatc
     4021 accactgtcc aaggcactgt cttctttggg aaggtatctg atttggtcag tcacaaattc
     4081 ttttttagcc ttccctggag aaaaacaagt ccccaagaaa aaattcactc tatgtagaga
     4141 aaaaatattt tctctcatgt tagtaaatgc agaacattta atattccaca atatatatgg
     4201 ttttttattt ataa
//
