LOCUS       NM_139073               1629 bp    mRNA    linear   PRI 20-FEB-2025
DEFINITION  Homo sapiens spermatogenesis associated 3 (SPATA3), mRNA.
ACCESSION   NM_139073 XM_939313
VERSION     NM_139073.5
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Pineau,C., Hikmet,F., Zhang,C., Oksvold,P., Chen,S., Fagerberg,L.,
            Uhlen,M. and Lindskog,C.
  TITLE     Cell Type-Specific Expression of Testis Elevated Genes Based on
            Transcriptomics and Antibody-Based Proteomics
  JOURNAL   J Proteome Res 18 (12), 4215-4230 (2019)
   PUBMED   31429579
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Fu,J.J., Lu,G.X., Li,L.Y., Liu,G., Xing,X.W. and Liu,S.F.
  TITLE     [Molecular cloning for testis spermatogenesis cell apoptosis
            related gene TSARG1 and Mtsarg1 and expression analysis for Mtsarg1
            gene]
  JOURNAL   Yi Chuan Xue Bao 30 (1), 25-29 (2003)
   PUBMED   12812072
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC105344.3.
            
            On Jul 29, 2021 this sequence version replaced NM_139073.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BI826810.1, HY204568.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000433428.7/ ENSP00000403804.2
            NMD candidate          :: translation inferred from conservation
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-414               AC105344.3         15463-15876
            415-586             AC105344.3         19708-19879
            587-730             AC105344.3         22026-22169
            731-810             AC105344.3         23381-23460
            811-1629            AC105344.3         26564-27382
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
                     /map="2q37.1"
     gene            1..1629
                     /gene="SPATA3"
                     /gene_synonym="TSARG1"
                     /note="spermatogenesis associated 3"
                     /db_xref="GeneID:130560"
                     /db_xref="HGNC:HGNC:17884"
                     /db_xref="MIM:619857"
     exon            1..414
                     /gene="SPATA3"
                     /gene_synonym="TSARG1"
                     /inference="alignment:Splign:2.1.0"
     CDS             114..692
                     /gene="SPATA3"
                     /gene_synonym="TSARG1"
                     /note="testis and spermatogenesis cell apoptosis related
                     gene 1; testis spermatocyte apoptosis-related protein 1;
                     testis and spermatogenesis cell-related protein 1"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 3"
                     /protein_id="NP_620712.2"
                     /db_xref="CCDS:CCDS2481.1"
                     /db_xref="GeneID:130560"
                     /db_xref="HGNC:HGNC:17884"
                     /db_xref="MIM:619857"
                     /translation="MKKVKKKRSEARRHRDSTSQHASSNSTSQQPSPESTPQQPSPES
                     TPQQPSPESTPQHSSLETTSRQPAFQALPAPEIRRSSCCLLSPDANVKAAPQSRKAGP
                     LIRAGPHSCSCATCPCSSACWRRLGLCHSRIFDVLLPRDWQMAPGRGLPNLLTFYRKS
                     SRKPSSHRNACPPSPRNCGCGSGGSRSCLLHH"
     exon            415..586
                     /gene="SPATA3"
                     /gene_synonym="TSARG1"
                     /inference="alignment:Splign:2.1.0"
     exon            587..730
                     /gene="SPATA3"
                     /gene_synonym="TSARG1"
                     /inference="alignment:Splign:2.1.0"
     exon            731..810
                     /gene="SPATA3"
                     /gene_synonym="TSARG1"
                     /inference="alignment:Splign:2.1.0"
     exon            811..1629
                     /gene="SPATA3"
                     /gene_synonym="TSARG1"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      873
                     /gene="SPATA3"
                     /gene_synonym="TSARG1"
                     /note="major polyA site"
ORIGIN      
        1 agctggaggc ccaagccagg ctcctagggc agagggcaaa cggcccctcc aggagggagc
       61 cgggagatta cgcagctcca tgtaggtcca cgtttaggtt gggaggatct accatgaaga
      121 aggtcaagaa gaaaaggtca gaggccagac gccaccgaga ctccacctcc cagcatgcta
      181 gctccaattc cacctctcag cagcctagcc ctgaatccac accacagcag cctagtcctg
      241 aatccacacc acagcagcct agccctgaat ccacaccaca gcattccagc cttgaaacca
      301 cctcccggca gccagcattc caagcccttc cagcacccga aatccgccgc tcctcttgct
      361 gccttttatc tccagatgct aacgtgaagg cagcccctca atccaggaaa gcagggcctc
      421 tgattcgcgc cggcccgcat tcctgctcct gtgccacttg cccctgcagc tccgcttgct
      481 ggcgtcgtct ggggctatgc catagccgca tcttcgatgt ccttctgcct cgggactggc
      541 agatggcgcc agggagagga ctccccaacc tgctcacctt ctacagaaaa tcttcaagaa
      601 aaccctccag tcatcgtaac gcgtgtcctc caagccctcg gaactgtggc tgtggctctg
      661 ggggctctag gagctgccta ctacatcact gaatccttgt gaacaagccc ctaggcccac
      721 agtctggcag acctccacca gccccaggag ttgataggtg atggcgctgg gagaagatgt
      781 tcagaatatc tcaaaagcca agtccagaag atccagtttc catcaaaggg acctctcttg
      841 tcaccaaaat ttaaaaaaag aaaaaaaaaa cgagttctgt ttctttagca tgttttactt
      901 agagacataa aagttggact tggcaaatga ctaggaaggg aggtctgggg gccccagtga
      961 ccttttgggc cacaggtcaa gcagaactgg tgcctgtcat tcctgttcag ggccacagac
     1021 ccccggtgga gcagctttct ctgcacacac tcacagaaca cagtgtttgc tttagatttt
     1081 ctcactctaa aggaagggat tataaagctt aactcaatag ctaacgtagt tagtcatctg
     1141 cacctctgtc ccagggtaat cccagttact gggaatagga ggaatgtgcc ggttcgcctc
     1201 caggcctgca ccccagagga cagaggccct gtgcccagga acactgtctc tagaaacagc
     1261 ttcttttagg gtcacctgtg atggggagca gcctgccatg cagccttgtg tttagtgcta
     1321 gtgatgtggc tacacccagc cagtgcctgg tgcgattcta cctctagctc ctgaacaggc
     1381 gactcgaaat cttagttcaa ggtgatccca gcaaacacca ataggggaga ggagtgtcaa
     1441 cgagggaagg aggctgggcc tggtggctca tgcctataat tccaagactt tgggaggcca
     1501 agacaggagg atggcttaag cccaggaggt caaggctgca gtgagctatg attgcaccgc
     1561 tgcactccag cctggacgac atagcaagac cctgtctcaa aaaataaaaa taaaaaaaag
     1621 gaaccacca
//
