LOCUS       XM_006713778            1938 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens spermatogenesis associated 16 (SPATA16),
            transcript variant X1, mRNA.
ACCESSION   XM_006713778
VERSION     XM_006713778.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000003.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_006713778.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
     gene            1..1938
                     /gene="SPATA16"
                     /gene_synonym="NYD-SP12; SPGF6"
                     /note="spermatogenesis associated 16; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 5 ESTs, 48 long SRA reads, 2 Proteins, and 80%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:83893"
                     /db_xref="HGNC:HGNC:29935"
                     /db_xref="MIM:609856"
     CDS             152..1774
                     /gene="SPATA16"
                     /gene_synonym="NYD-SP12; SPGF6"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 16 isoform
                     X1"
                     /protein_id="XP_006713841.1"
                     /db_xref="GeneID:83893"
                     /db_xref="HGNC:HGNC:29935"
                     /db_xref="MIM:609856"
                     /translation="MDAGSSRSLENAVNRIYHDQLVPKINTSKKMSTLAHPPNILEMS
                     QEIKKNCGGKQVEITLERTKMTKGIKEKQSNDLEKAAFKRKAEGEEKPTRKKQAKITE
                     LDNQLITMPLPHIPLKNIMDVEMKLVYIDEMGVRYEFVESFMSTGSQPTCQAAEIVDP
                     LSVHNFSFLPQIDKWLQVALKDASSCYRQKKYALAAGQFRTALELCSKGAVLGEPFDA
                     PAEDIASVASFIETKLVTCYLRMRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLE
                     RYSEAARSAMIADYMFWLGGGREESISKLIKLYWQAMIEEAITRAESFSVMYTPFATK
                     IRADKIEKVKDAFTKTHPAYAEYMYTDLQALHMLPQTVDWSSFPPQQYLLTLGFKNKD
                     DGKFLEKISSRKLPIFTEHKTPFGLTREDTVRQMETMGKRILPILDFIRSTQLNGSFP
                     ASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQEAELLQSLMAD
                     AMDTLEGRRNNNERVWNMIQKNQTAKQHSVCN"
     polyA_site      1938
                     /gene="SPATA16"
                     /gene_synonym="NYD-SP12; SPGF6"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggcgtccccg cgagcaagca gcctgatcag gcctcgcagt gggacgttgg gaagccggtg
       61 ttggcagatg ctgtggctgg gaggagtcca gagcttcgcc ctgtccccgc ggggctgagc
      121 cacaactgct taggagtttt gggcaggatc gatggatgca ggaagcagta ggagtttgga
      181 gaatgcagtg aataggatct atcatgatca gcttgttcca aagataaaca caagcaagaa
      241 aatgtccacc ttagcgcacc cacctaacat cctggaaatg tcacaagaga ttaagaaaaa
      301 ctgtggaggt aaacaggtag aaatcacact tgaaagaaca aaaatgacaa agggcatcaa
      361 agaaaaacaa agcaatgatt tagagaaagc agcctttaaa cggaaggcag aaggtgaaga
      421 aaagccaact agaaagaaac aggcaaagat aacagaactt gacaatcagt taatcaccat
      481 gcctctgcct cacatcccct taaagaacat aatggatgtg gaaatgaagt tggtctacat
      541 tgatgaaatg ggtgttcgct atgagtttgt agagtccttc atgtctactg ggagtcagcc
      601 aacatgccaa gctgctgaaa tagtagaccc tttgagtgta cataatttca gctttctgcc
      661 tcagattgac aaatggcttc aggtagcctt aaaggatgcc agctcttgct atagacaaaa
      721 gaaatacgcc ttggcagcag gacagttcag aacagcactt gagctttgca gcaaaggagc
      781 agttctggga gaaccatttg atgcacctgc tgaagatata gcaagcgtgg caagtttcat
      841 tgagacaaag cttgttacct gttatctacg gatgaggaaa ccagatcttg ccctgaatca
      901 tgcacacagg agcattgttt taaacccagc ctatttccgg aatcatcttc gtcaagcaac
      961 agtgtttaga tgtctggaga ggtattcaga ggctgcccgg agtgccatga ttgctgacta
     1021 catgttctgg cttggtggag gaagggaaga gagcataagc aagctcatca aactgtattg
     1081 gcaggccatg attgaggaag ccatcaccag agctgaatct ttctcggtta tgtacacacc
     1141 atttgcgaca aaaataagag ctgataaaat agaaaaagta aaagatgctt tcacaaaaac
     1201 tcatcctgca tatgcagagt atatgtacac agatcttcaa gcactccaca tgttgcctca
     1261 gacagttgac tggtcatctt ttcctcccca acaatatctc ttgactcttg ggttcaaaaa
     1321 caaagatgat ggaaaatttt tggaaaaaat atcaagcagg aagctgccga tattcacaga
     1381 gcataaaaca cctttcggtc tgaccagaga agatacagtg aggcaaatgg agacaatggg
     1441 gaagcgaatc ttgccaatat tggattttat tagaagcacc caattgaatg ggagttttcc
     1501 tgcatcctca ggtgtgatgg agaagttgca atatgccagc ctcctcagcc agctgcagag
     1561 agtaaaggag cagtcccagg tgattaatca agcaatggca gagctagcaa ccattcccta
     1621 cctacaggac atcagtcaac aggaggcaga attgctgcag tcactaatgg cagatgctat
     1681 ggacaccctt gaaggaagaa gaaacaataa tgaacgtgtg tggaatatga tccaaaagaa
     1741 tcaaacagct aagcaacact ctgtctgcaa ctaagaagaa aaagttattt gctcttcatt
     1801 tataaagcct aaacctggca ttgagaagat cagcatttaa cctggtatga catacagtat
     1861 tgtcttgttc tgctatgcct ctggatcact gattgaagac taaatgagga aaataaaact
     1921 ttgttacatt aaaagtaa
//
