LOCUS       NM_001364461             892 bp    mRNA    linear   PRI 07-APR-2024
DEFINITION  Homo sapiens spermadhesin family member (SPADH), mRNA.
ACCESSION   NM_001364461
VERSION     NM_001364461.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Pertea,M., Shumate,A., Pertea,G., Varabyou,A., Breitwieser,F.P.,
            Chang,Y.C., Madugundu,A.K., Pandey,A. and Salzberg,S.L.
  TITLE     CHESS: a new human gene catalog curated from thousands of
            large-scale RNA sequencing experiments reveals extensive
            transcriptional noise
  JOURNAL   Genome Biol 19 (1), 208 (2018)
   PUBMED   30486838
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 892)
  AUTHORS   Haase,B., Schlotterer,C., Hundrieser,M.E., Kuiper,H., Distl,O.,
            Topfer-Petersen,E. and Leeb,T.
  TITLE     Evolution of the spermadhesin gene family
  JOURNAL   Gene 352, 20-29 (2005)
   PUBMED   15922517
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL603764.27.
            
            On Sep 21, 2020 this sequence version replaced NM_001364461.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA2145893, SAMEA2151119
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000652090.1/ ENSP00000498797.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-78                AL603764.27        169292-169369
            79-108              AL603764.27        172083-172112
            109-244             AL603764.27        173198-173333
            245-892             AL603764.27        175289-175936
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="10"
                     /map="10q26.13"
     gene            1..892
                     /gene="SPADH"
                     /note="spermadhesin family member"
                     /db_xref="GeneID:112577516"
                     /db_xref="HGNC:HGNC:55808"
     exon            1..78
                     /gene="SPADH"
                     /inference="alignment:Splign:2.1.0"
     CDS             33..446
                     /gene="SPADH"
                     /note="carbohydrate-binding protein AQN-1-like; CUB
                     domain-containing protein"
                     /codon_start=1
                     /product="CUB domain-containing protein precursor"
                     /protein_id="NP_001351390.1"
                     /db_xref="CCDS:CCDS91369.1"
                     /db_xref="GeneID:112577516"
                     /db_xref="HGNC:HGNC:55808"
                     /translation="MRLSRAFAWPLLCSIATTVKAPFATAPSDCGGHYTDEYGRIFNY
                     AGPKTECVWIIELNPGEIVTVAIPDLKGFACGKEYVEVLDGPPGSESLDRICKAFSTF
                     YYSSSNIITIKYSREPSHPPTFFEIYYFVDAWSTH"
     exon            79..108
                     /gene="SPADH"
                     /inference="alignment:Splign:2.1.0"
     exon            109..244
                     /gene="SPADH"
                     /inference="alignment:Splign:2.1.0"
     exon            245..892
                     /gene="SPADH"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actcctgagg ttggtgccag gccctgctga ggatgaggct gtccagagcc ttcgcttggc
       61 cgctgctgtg cagtatagcc acaactgtta aagctccatt tgccacagca cccagtgact
      121 gtgggggcca ctacacagat gaatatggca ggatcttcaa ctacgctggg ccgaaaactg
      181 aatgcgtctg gatcatcgag ttgaaccccg gggagatagt cacggtggcc attccagacc
      241 tcaaaggatt cgcatgtggc aaagaatacg tggaagtgct ggatggacct ccagggtctg
      301 agtccttgga caggatttgt aaagccttca gtacattcta ttactcttct tccaacatca
      361 tcaccatcaa gtactccaga gaacccagtc atccacccac cttctttgaa atatattact
      421 ttgttgacgc ttggtcaaca cattaatagg aagatcgggg gaagaggcac ctgctgatgc
      481 tcccctgctc tgcctgagcc tggttctgca tatgttggac agaggctata cctgggactg
      541 cagaaataag attgagtcat agttctcctg gatcagcatt gggtgaggga gagggaatgt
      601 gaccctgtga cccttccaga aaaaggtacg ggttctgtct cagcatttct gtacacccac
      661 atctttagtg ttagaagatc atatgtgaaa actttatctt tcctgtcttc ttgatataga
      721 agtgggtatc tctgagaagc catctttctc tctattgatc ttattatatg ccctgtagca
      781 ttttctagtg tatttctgca aagtgagtag tatatgaact atatactata aggaatgtat
      841 aatacacata ttctatatga atatataatc ctagaaaata tatataaaca ag
//
