LOCUS       XM_017003242            3139 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens SP140 nuclear body protein (SP140),
            transcript variant X16, mRNA.
ACCESSION   XM_017003242
VERSION     XM_017003242.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000002.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017003242.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3139
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
     gene            1..3139
                     /gene="SP140"
                     /gene_synonym="LYSP100; LYSP100-A; LYSP100-B"
                     /note="SP140 nuclear body protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, 324 long SRA reads, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 13 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:11262"
                     /db_xref="HGNC:HGNC:17133"
                     /db_xref="MIM:608602"
     CDS             110..2608
                     /gene="SP140"
                     /gene_synonym="LYSP100; LYSP100-A; LYSP100-B"
                     /codon_start=1
                     /product="nuclear body protein SP140 isoform X14"
                     /protein_id="XP_016858731.1"
                     /db_xref="GeneID:11262"
                     /db_xref="HGNC:HGNC:17133"
                     /db_xref="MIM:608602"
                     /translation="MAQQGQQGQMASGDSNLNFRMVAEIQNVEGQNLQEQVCPEPIFR
                     FFRENKVEIASAITRPFPFLMGLRDRSFISEQMYEHFQEAFRNLVPVTRVMYCVLSEL
                     EKTFGWSHLEALFSRINLMAYPDLNEIYRSFQNVCYEHSPLQMNNVNDLEDRPRLLPY
                     GKQENSNACHEMDDIAVPQEALSSSPRCEPGFSSESCEQLALPKAGGGDAEDAPSLLP
                     VLESNGMIDAARTYSTAPGEKQGEEEGRNSPRKRNQDKEKYQESPEGRDKETFDLKTP
                     QVTNEGEPEKGLCLLPGEGEEGSDDCSEMCDGEEPQEASSSLARCGSETFDLKTPQVT
                     NEGEPEKELSLLPGEGEEGSDDCSEMCDGEERQEASSSLARRGSVSSELENHPMNEEG
                     ESEELASSLLYDNVPGAEQSAYENEKCSCVMCFSEEVPGSPEARTESDQACGTMDTVD
                     IANNSTLGKPKRKRRKKRGHGWSRMRMRRQENSQQNDNSKADGQVVSSEKKANVNLKD
                     LSKIRGRKRGKPGTRFTQSDRAAQKRVRSRASRKHKDETVDFKAPLLPVTCGGVKGIL
                     HKKKLQQGILVKCIQTEDGKWFTPTEFEIKGGHARSKNWRLSVRCGGWPLRWLMENGF
                     LPDPPRIRYRKKKRILKSQNNSSVDPCMRNLDECEVCRDGGELFCCDTCSRVFHEDCH
                     IPPVEAERTPWNCIFCRMKESPGSQQCCQESEVLERQMCPEEQLKCEFLLLKVYCCSE
                     SSFFAKIPYYYYIREACQGLKEPMWLDKIKKRLNEHGYPQVEGFVQDMRLIFQNHRAS
                     YKYKDFGQMGFRLEAEFEKNFKEVFAIQETNGNN"
ORIGIN      
        1 cttttcctct ttgactgagc accgaggggc agttggcagc ttcacctcag agctgcagga
       61 aggaacgggg cagtgaaaat cgaatcgggt gtgatcctag gccaagctca tggcccagca
      121 gggccagcag gggcagatgg caagtggaga cagcaatctc aacttcagga tggtcgcaga
      181 gatccagaac gtagagggtc agaacctgca ggagcaggtt tgccctgagc ccattttcag
      241 gttcttcaga gaaaacaagg tggagattgc aagtgcaata acaaggccat ttcctttcct
      301 tatgggcctc cgagaccgct ccttcatctc cgagcagatg tatgaacatt ttcaagaagc
      361 ttttagaaac ctggtcccag tgacaagagt gatgtattgt gtactcagtg aactggagaa
      421 gacatttggc tggtcacatc tggaagcatt gttcagcagg attaacctga tggcctatcc
      481 tgatttaaac gagatttaca gaagcttcca gaatgtatgc tatgaacact cacctctcca
      541 aatgaataat gtaaacgatt tagaagatag acccagatta ctaccatatg gtaaacaaga
      601 gaacagcaat gcctgtcatg aaatggatga tatagcagtg cctcaggaag ccttgagctc
      661 ctcgccaagg tgtgagccag gtttctcttc agagtcttgt gagcagttag ctctcccaaa
      721 ggctggtgga ggagatgctg aagatgcacc cagcctacta ccagttctag aaagcaacgg
      781 gatgatagat gcggcaagga catacagcac agcaccaggg gagaaacagg gagaggagga
      841 aggcaggaac agtcccagaa aaagaaacca agacaaggag aagtaccaag agagtccaga
      901 gggaagagac aaagagacct ttgatctaaa aactccccaa gtcactaatg aaggagaacc
      961 agagaagggg ctctgtctac taccaggtga aggagaagag ggcagtgatg actgttcaga
     1021 aatgtgtgat ggagaagagc cccaggaagc ctctagctcc ctagcaagat gtgggtcaga
     1081 gacctttgat ctaaagactc cccaagtcac taatgaagga gaaccagaga aggagctcag
     1141 tctactacca ggtgaaggag aagagggcag tgatgactgt tcggaaatgt gtgatggaga
     1201 agagcgccag gaagcctcta gctccctagc aagacgtggg tcagtgtcta gtgaactaga
     1261 aaatcaccca atgaatgaag aaggagaatc agaagagctt gcttctagcc tgctatatga
     1321 taatgtacca ggagcggagc aatcagcata tgaaaatgag aagtgttcct gtgtcatgtg
     1381 tttctcagaa gaggtgccag gaagcccaga agcaaggacg gaaagtgatc aagcgtgtgg
     1441 cacaatggat actgtggata ttgcaaacaa ctccactttg ggaaaaccca agaggaaaag
     1501 aagaaaaaag agggggcatg gctggagcag aatgagaatg agaaggcagg aaaacagcca
     1561 acaaaatgat aatagcaaag ccgacggcca ggtggtctcc agtgaaaaga aggcgaacgt
     1621 gaatctgaaa gacctttcca agattagggg gagaaagaga ggcaaacctg gaacccgctt
     1681 cactcagagt gacagagctg cacagaaaag agtccgatca agagcttcaa gaaagcacaa
     1741 agatgaaact gtggatttta aggctccttt gcttccagtg acctgtggtg gggtgaaggg
     1801 aattttacat aagaagaaat tgcagcaagg aatcttggtg aagtgtatac agactgagga
     1861 tggaaaatgg ttcaccccca cggaatttga aatcaaagga ggccatgcaa gatcaaagaa
     1921 ctggaggctg agtgtgcgct gtggcgggtg gcccctacga tggctgatgg agaatggatt
     1981 tctgcctgat cctccaagaa tacgttacag gaaaaaaaag agaatactga agtctcaaaa
     2041 caatagctca gttgaccctt gtatgagaaa cctggatgag tgtgaggtgt gccgggacgg
     2101 aggggagctg ttctgttgcg acacttgttc aagagtcttc catgaggact gtcacatccc
     2161 gcctgtggaa gctgagagga ccccgtggaa ttgcatcttc tgcaggatga aggagtctcc
     2221 gggaagccaa cagtgttgtc aggaatctga ggtcctggag aggcagatgt gtcctgagga
     2281 acagttgaaa tgtgagttcc tcctcttgaa agtctattgc tgttctgaga gctccttttt
     2341 tgccaagatt ccatactatt attatattag agaggcgtgt caaggcctga aggagcccat
     2401 gtggttggat aaaatcaaga aaaggctgaa tgagcacggt tacccccaag tggaggggtt
     2461 tgtacaagac atgcgcctca tcttccagaa ccacagggcc tcttacaagt acaaggattt
     2521 tggccaaatg ggatttagac tggaggctga gtttgagaag aatttcaagg aagtgtttgc
     2581 tattcaggaa acaaatggga acaattgact ggattagtgg atgctgaaag cattcagcaa
     2641 atggcaccct aaaatatgcc gctggtttgc cactgacttc aaaatgaggt cacttgggca
     2701 cagcacatgc agggaggggc ttttctctga gcctccttca tctgcccaaa gacaaatcct
     2761 caaaaggaaa ttcaatcatc atgaatcaca accccaagta tctcatcagc cagggaagag
     2821 taagtgggat cacagggaag gatgttggca gcgacaccat cccatacagg ctcttacctc
     2881 ttctcctgag ggctgctcca gacaacattt attacccaga agaccttttg tctgaaaacc
     2941 agccaagctt tattcaggac acacttcttg ccttcacttt cccacttccg tggccacctc
     3001 catgcagaag ccctaagccc acattctttc gatagctcac ggtggtgcat gagtgtccat
     3061 catctgactc ttctcggagt ctcatatttt gtgggactcc tgtgcaaaca tatgttatta
     3121 aaattttttt cctcctgtt
//
