LOCUS       NM_001105576            1615 bp    mRNA    linear   PRI 06-JUN-2024
DEFINITION  Homo sapiens sosondowah ankyrin repeat domain family member D
            (SOWAHD), mRNA.
ACCESSION   NM_001105576 XM_293380 XM_937843
VERSION     NM_001105576.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Maeso,I., Irimia,M., Tena,J.J., Gonzalez-Perez,E., Tran,D.,
            Ravi,V., Venkatesh,B., Campuzano,S., Gomez-Skarmeta,J.L. and
            Garcia-Fernandez,J.
  TITLE     An ancient genomic regulatory block conserved across bilaterians
            and its dismantling in tetrapods by retrogene replacement
  JOURNAL   Genome Res 22 (4), 642-655 (2012)
   PUBMED   22234889
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Ross,M.T., Grafham,D.V., Coffey,A.J., Scherer,S., McLay,K.,
            Muzny,D., Platzer,M., Howell,G.R., Burrows,C., Bird,C.P.,
            Frankish,A., Lovell,F.L., Howe,K.L., Ashurst,J.L., Fulton,R.S.,
            Sudbrak,R., Wen,G., Jones,M.C., Hurles,M.E., Andrews,T.D.,
            Scott,C.E., Searle,S., Ramser,J., Whittaker,A., Deadman,R.,
            Carter,N.P., Hunt,S.E., Chen,R., Cree,A., Gunaratne,P., Havlak,P.,
            Hodgson,A., Metzker,M.L., Richards,S., Scott,G., Steffen,D.,
            Sodergren,E., Wheeler,D.A., Worley,K.C., Ainscough,R.,
            Ambrose,K.D., Ansari-Lari,M.A., Aradhya,S., Ashwell,R.I.,
            Babbage,A.K., Bagguley,C.L., Ballabio,A., Banerjee,R., Barker,G.E.,
            Barlow,K.F., Barrett,I.P., Bates,K.N., Beare,D.M., Beasley,H.,
            Beasley,O., Beck,A., Bethel,G., Blechschmidt,K., Brady,N.,
            Bray-Allen,S., Bridgeman,A.M., Brown,A.J., Brown,M.J., Bonnin,D.,
            Bruford,E.A., Buhay,C., Burch,P., Burford,D., Burgess,J.,
            Burrill,W., Burton,J., Bye,J.M., Carder,C., Carrel,L., Chako,J.,
            Chapman,J.C., Chavez,D., Chen,E., Chen,G., Chen,Y., Chen,Z.,
            Chinault,C., Ciccodicola,A., Clark,S.Y., Clarke,G., Clee,C.M.,
            Clegg,S., Clerc-Blankenburg,K., Clifford,K., Cobley,V., Cole,C.G.,
            Conquer,J.S., Corby,N., Connor,R.E., David,R., Davies,J., Davis,C.,
            Davis,J., Delgado,O., Deshazo,D., Dhami,P., Ding,Y., Dinh,H.,
            Dodsworth,S., Draper,H., Dugan-Rocha,S., Dunham,A., Dunn,M.,
            Durbin,K.J., Dutta,I., Eades,T., Ellwood,M., Emery-Cohen,A.,
            Errington,H., Evans,K.L., Faulkner,L., Francis,F., Frankland,J.,
            Fraser,A.E., Galgoczy,P., Gilbert,J., Gill,R., Glockner,G.,
            Gregory,S.G., Gribble,S., Griffiths,C., Grocock,R., Gu,Y.,
            Gwilliam,R., Hamilton,C., Hart,E.A., Hawes,A., Heath,P.D.,
            Heitmann,K., Hennig,S., Hernandez,J., Hinzmann,B., Ho,S., Hoffs,M.,
            Howden,P.J., Huckle,E.J., Hume,J., Hunt,P.J., Hunt,A.R.,
            Isherwood,J., Jacob,L., Johnson,D., Jones,S., de Jong,P.J.,
            Joseph,S.S., Keenan,S., Kelly,S., Kershaw,J.K., Khan,Z.,
            Kioschis,P., Klages,S., Knights,A.J., Kosiura,A., Kovar-Smith,C.,
            Laird,G.K., Langford,C., Lawlor,S., Leversha,M., Lewis,L., Liu,W.,
            Lloyd,C., Lloyd,D.M., Loulseged,H., Loveland,J.E., Lovell,J.D.,
            Lozado,R., Lu,J., Lyne,R., Ma,J., Maheshwari,M., Matthews,L.H.,
            McDowall,J., McLaren,S., McMurray,A., Meidl,P., Meitinger,T.,
            Milne,S., Miner,G., Mistry,S.L., Morgan,M., Morris,S., Muller,I.,
            Mullikin,J.C., Nguyen,N., Nordsiek,G., Nyakatura,G., O'Dell,C.N.,
            Okwuonu,G., Palmer,S., Pandian,R., Parker,D., Parrish,J.,
            Pasternak,S., Patel,D., Pearce,A.V., Pearson,D.M., Pelan,S.E.,
            Perez,L., Porter,K.M., Ramsey,Y., Reichwald,K., Rhodes,S.,
            Ridler,K.A., Schlessinger,D., Schueler,M.G., Sehra,H.K.,
            Shaw-Smith,C., Shen,H., Sheridan,E.M., Shownkeen,R., Skuce,C.D.,
            Smith,M.L., Sotheran,E.C., Steingruber,H.E., Steward,C.A.,
            Storey,R., Swann,R.M., Swarbreck,D., Tabor,P.E., Taudien,S.,
            Taylor,T., Teague,B., Thomas,K., Thorpe,A., Timms,K., Tracey,A.,
            Trevanion,S., Tromans,A.C., d'Urso,M., Verduzco,D., Villasana,D.,
            Waldron,L., Wall,M., Wang,Q., Warren,J., Warry,G.L., Wei,X.,
            West,A., Whitehead,S.L., Whiteley,M.N., Wilkinson,J.E.,
            Willey,D.L., Williams,G., Williams,L., Williamson,A.,
            Williamson,H., Wilming,L., Woodmansey,R.L., Wray,P.W., Yen,J.,
            Zhang,J., Zhou,J., Zoghbi,H., Zorilla,S., Buck,D., Reinhardt,R.,
            Poustka,A., Rosenthal,A., Lehrach,H., Meindl,A., Minx,P.J.,
            Hillier,L.W., Willard,H.F., Wilson,R.K., Waterston,R.H., Rice,C.M.,
            Vaudin,M., Coulson,A., Nelson,D.L., Weinstock,G., Sulston,J.E.,
            Durbin,R., Hubbard,T., Gibbs,R.A., Beck,S., Rogers,J. and
            Bentley,D.R.
  TITLE     The DNA sequence of the human X chromosome
  JOURNAL   Nature 434 (7031), 325-337 (2005)
   PUBMED   15772651
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC005052.2 and CD368490.1.
            
            On Nov 22, 2018 this sequence version replaced NM_001105576.2.
            
            ##Evidence-Data-START##
            Transcript is intronless :: DRR138515.935647.1, DRR138524.850552.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000343905.5/ ENSP00000340975.3
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1577              AC005052.2         69123-70699
            1578-1615           CD368490.1         18-55               c
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
                     /map="Xq24"
     gene            1..1615
                     /gene="SOWAHD"
                     /gene_synonym="ANKRD58"
                     /note="sosondowah ankyrin repeat domain family member D"
                     /db_xref="GeneID:347454"
                     /db_xref="HGNC:HGNC:32960"
     exon            1..1615
                     /gene="SOWAHD"
                     /gene_synonym="ANKRD58"
                     /inference="alignment:Splign:2.1.0"
     CDS             81..1028
                     /gene="SOWAHD"
                     /gene_synonym="ANKRD58"
                     /note="ankyrin repeat domain-containing protein 58;
                     ankyrin repeat domain 58; protein sosondowah homolog D"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein SOWAHD"
                     /protein_id="NP_001099046.1"
                     /db_xref="CCDS:CCDS43984.1"
                     /db_xref="GeneID:347454"
                     /db_xref="HGNC:HGNC:32960"
                     /translation="MAQLGGAANRAPTASLAPTSQSLRCAPQPRPSRADTGSLGRYWG
                     KAAAAASREHPFPGTLMHSAAGSGRRRGALRELLGLQRAAPAGWLSEERAEELGGPSG
                     PGSSRLCLEPREHAWILAAAEGRYEVLRELLEAEPELLLRGDPITGYSVLHWLAKHGR
                     HEELILVHDFALRRGLRLDVSAPGSGGLTPLHLAALQGHDMVIKVLVGALGADATRRD
                     HSGHRACHYLRPDAPWRLRELSGAEEWEMESGSGCTNLNNNSSGTTAWRAASAVGATA
                     VETSRRVAASRTKAKDTAGSRVAQMHSLFRHLFPSFQDR"
     regulatory      1584..1589
                     /regulatory_class="polyA_signal_sequence"
                     /gene="SOWAHD"
                     /gene_synonym="ANKRD58"
                     /note="hexamer: ATTAAA"
     polyA_site      1615
                     /gene="SOWAHD"
                     /gene_synonym="ANKRD58"
                     /note="major polyA site"
ORIGIN      
        1 gccagttcct ctcccgttgg ggcccgggaa gggcagctaa cgctggacac tgggacggcc
       61 gcggcggcag cttcaagacc atggcccagc tcggaggggc cgcgaaccgg gcacccacgg
      121 cctctctcgc gccgacctcg cagagcctgc ggtgcgcccc gcagccccgc ccctcgagag
      181 cggacactgg tagcctgggc aggtactggg gcaaagccgc agccgccgcc tcccgggagc
      241 accccttccc aggcacgctg atgcactctg cagcgggctc agggcgccgg cggggagcgc
      301 tgcgggaact gctggggctg cagcgggcgg ctcctgcggg gtggctgtcg gaggagcgcg
      361 ccgaggagct gggcgggccg agtgggccgg gcagcagcag gctgtgcctg gaaccgcggg
      421 agcacgcgtg gattctggca gccgccgagg gccgctatga ggtgctgcgg gagctgctgg
      481 aggctgagcc ggagctgctg ctgcggggcg acccgatcac cggctactcg gttctgcact
      541 ggctggccaa gcacgggcgc cacgaggagc tcattctggt acacgatttc gccctacgcc
      601 gggggctgag gctcgacgtg agcgccccag gcagcggcgg cctcacgccc ctccacctgg
      661 cggcccttca gggccacgac atggtcatca aggtgctggt gggcgccctg ggtgctgacg
      721 ctacgcgccg cgaccacagc ggccaccggg cctgccacta cctgcggccc gacgcgcctt
      781 ggaggttgcg ggagctgtcg ggagccgagg aatgggagat ggagagcggc agcgggtgca
      841 ccaacctgaa caacaacagc agtggcacca ctgcgtggag ggccgcgagc gcagtgggcg
      901 cgacggctgt ggagacaagc aggagagtgg cagcgtcgcg gaccaaggcg aaggacaccg
      961 cgggcagccg ggtggcgcaa atgcatagcc ttttccgcca tctgttcccc tcattccagg
     1021 accgttgaca gggacagaga ctggagagct aggaggggct gtgacactgt ggcgatggct
     1081 aggtcctggg ttgtcccggg ttccaccgaa ggagaggcgc cttggacgct gcttgggcct
     1141 gcaaggaaca gaacacgtcg gggtccgact caggtacttg tctcaggtct cctgtaacca
     1201 ccggcctgga ggacccgggg actcgggcac cacctcacca agagagagtg aaggaccaag
     1261 ctggcctggc tccgagttcc aaagctacag gactaaggag ttgggagcag ggagcgtggt
     1321 cctgcttggg agagggcaag ttaagcttcc aggggccatt tctgggcagg ccgacgcgct
     1381 gggtttatta ggaaacattc gctagaagaa tgagttaaga ttgtaaacca ccaatgcaga
     1441 gaaaacgcct aactctgccg gcctcgctcg gccattaatg ggtcttgggg tgcgggtaga
     1501 gtcagcctct gacaacctcc tcctgagacg acccagcctt actggtactt tttctcatgt
     1561 atcacaggtt acttcttatg tatattaaag tggaatatgt gttcttttca catga
//
