LOCUS       XM_011518698            3428 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens spermatogenesis and oogenesis specific
            basic helix-loop-helix 1 (SOHLH1), transcript variant X1, mRNA.
ACCESSION   XM_011518698
VERSION     XM_011518698.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000009.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011518698.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
     gene            1..3428
                     /gene="SOHLH1"
                     /gene_synonym="bA100C15.3; bHLHe80; C9orf157; NOHLH; ODG5;
                     SPATA27; SPGF32; TEB2"
                     /note="spermatogenesis and oogenesis specific basic
                     helix-loop-helix 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 13 ESTs, 5 long
                     SRA reads, 1 Protein, and 96% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:402381"
                     /db_xref="HGNC:HGNC:27845"
                     /db_xref="MIM:610224"
     CDS             2009..3238
                     /gene="SOHLH1"
                     /gene_synonym="bA100C15.3; bHLHe80; C9orf157; NOHLH; ODG5;
                     SPATA27; SPGF32; TEB2"
                     /codon_start=1
                     /product="spermatogenesis- and oogenesis-specific basic
                     helix-loop-helix-containing protein 1 isoform X1"
                     /protein_id="XP_011517000.1"
                     /db_xref="GeneID:402381"
                     /db_xref="HGNC:HGNC:27845"
                     /db_xref="MIM:610224"
                     /translation="MASRCSEPYPEVSRIPTVRGCNGSLSGALSCCEDSARGSGPPKA
                     PTVAEGPSSCLRRNVISERERRKRMSLSCERLRALLPQFDGRREDMASVLEMSVQFLR
                     LASALGPSQEQHAILASSKEMWHSLQEDVLQLTLSSQIQAGVPDPGTGASSGTRTPDV
                     KAFLESPWSLDPASASPEPVPHILASSRQWDPASCTSLGTDKCEALLGLCQVRGGLPP
                     FSEPSSLVPWPPGRSLPKAVRPPLSWPPFSQQQTLPVMSGEALGWLGQAGPLAMGAAP
                     LGEPAKEDPMLAQEAGSALGSDVDDGTSFLLTAGPSSWPGFSVWEPVPGSGPTGVLGL
                     GPPGSLEGRGGSGPAWAPAESSPLDVGEPGFLGDPELGSQELQDSPLEPWGLDVDCAG
                     LALKDEVESIFPDFFAC"
ORIGIN      
        1 gtccgcgcgc gccccctgcc ggccgcgccg ggacccgcgg cggctctggc ccaggctggg
       61 acgggggtgc ggggtaggga gggcgatccg ctcccgccgc ggccctctga gccctcaaaa
      121 ctccgaaaaa caggacgggg ttcgtcaatg gctagaaaag cccaagcgcg ccgccaccgg
      181 gccctacacc cctgggaggg ctccgtggtg ggcgggggct cagggggctc tgggtccttg
      241 gcgggcagca gggcacatgc gctgctcgga ccgccagcgt ccagccgctg cgcccaggga
      301 ccgtcagcac ctcccgcttg tgctgctctg ccgtggtcaa cactggtcat tgaacacaag
      361 ccagattcaa gacgactccc cgcccccccg cccccacacc ccccgcaggc tgcggcatct
      421 gtgggtgggc gccacatcct gggcttggcc tgggggaggg ggatgactgc accccgccct
      481 gtgctctcac ccagacgggc acacacagca cctttagacg ggtggggagg ggccccaact
      541 taagatgctg caggccaaag actaggaagc agagggtccc cctgcgggcc ccctttcccg
      601 tgcacgtgct cacactgtta cacatgcgtc accctggctc agcctcacac agagctctgg
      661 agaactgcga tttctgtccc cagagctttg ttggtttgca gggtggacca ggcccctcac
      721 taagccagga ctgtgcccac gagggccagg gggagggcca ggtccatttg gagggcgcat
      781 gccatgtact ttgtggtccc tggcctcccc agtgtctctc cagagggtcc ttccctgttt
      841 ctccaggagg cagcaggctg aacacagatg cttttgaggg gtgggtgggg aacactcggg
      901 gaagtctagg atgctaagtc cccagcagag gttcagcctg tgcccccgcc acacagctcg
      961 tgggcatctt gggggttttt cctcaggtcc ctagattggc cggtgctgct gccggggtcc
     1021 caccacccct gggcgggtgc cgccggggca agatggtggc ctttctgcca acgccctcct
     1081 gcctggggaa ctcagaaaaa actgagaggc cgcaccatct gcatctgtga ttaattagca
     1141 gtaattacac gtgttgtcaa cggcaggaga gtcacaggtt tgatgacatt ccgagggctt
     1201 tagggaaaca aaaacttggc cccactctgc cactgaggag ccccagatcg ccagcccgtc
     1261 catccctccc tggccagggg cagggccggg agaggggccc aggtccccga gagcttttgc
     1321 cctcctctcc aaccccgtcc tcctccatgt ctgacctgca gccaaggctg ggcggagcag
     1381 ggatggagac accaccttat attacataac ctccctctgc tccaaacacc cttcacccat
     1441 ctttggccca aagtccagga tgccagcccg aggcccagag ccgcgccttc tccacaggag
     1501 actggggcac cccggacaga cgtccccgtg tggtggcacc tgcccgggct ccttcttgcc
     1561 tcccctctcg ggaggagagc ccctgccacc caccccacct cctcccgcta cgacctcagc
     1621 acgagccagg ccagggatgt cctcccaaca gtccagcctc accccccacc ctcgtcccct
     1681 ctgcttccct gagggccccc cgcaacctcc gtgaaagagg aagggtctcc acctccccct
     1741 tccctccgtc atccccccaa aagtatgtac tgggggactc aagcccagcg cagggcggct
     1801 cctggagttc agcggggagg tgagcaaaca cctggcgccg gagctttctg aatttggatg
     1861 ggcaggaccc ccgcgatccc gcagaaacct gttgagagtg tgaggggctg ggctcctaag
     1921 ggcagagccc gcatctccaa agtgcccaag ggcaccgaga ccaccgcata agtgggaacc
     1981 gaggcgaccc ccgggaagct gcgagttcat ggcgtcccgg tgctccgagc cctacccgga
     2041 ggtctccaga atccctaccg tcaggggatg caacggctcc ctgtctggtg ccctctcctg
     2101 ctgcgaggac tcggcccggg gctcgggccc gcccaaggcc cctacggtgg ccgagggtcc
     2161 cagctcctgc cttcggcgga acgtgatcag cgagagggag cgcaggaagc ggatgtcgtt
     2221 gagctgtgag cgtctgcggg ccctgctgcc ccagttcgat ggccggcggg aggacatggc
     2281 ctcggtcctg gagatgtctg tgcagttcct gcggcttgcc agcgccctgg ggcccagtca
     2341 ggagcagcac gctattcttg cttcctccaa ggaaatgtgg cactcgttgc aggaggatgt
     2401 tttacagttg acgttgtcga gtcagattca agcaggtgtg ccagaccctg ggacgggagc
     2461 gtccagcggg actcgaaccc cagatgtgaa ggcgtttctg gaaagtcctt ggtccctgga
     2521 tccagcgtcg gccagcccag agcccgtgcc gcacatcctt gcgtcctcca ggcagtggga
     2581 ccccgcgagc tgcacgtccc tgggcacgga caagtgtgag gcactgttgg ggctgtgcca
     2641 ggtgcggggt gggctgcccc ctttctcaga accttccagc ctggtgccgt ggcccccagg
     2701 ccggagtctt cctaaggctg tgaggccacc cctgtcctgg cctccgttct cgcagcagca
     2761 gaccttgccc gtgatgagcg gggaggccct tggctggctg ggccaggctg ggcccctggc
     2821 catgggggct gcacctctgg gggagccagc caaggaggac cccatgctgg cgcaggaggc
     2881 cgggtctgcg ttggggtctg atgtggacga tgggacgtcc ttcctgctga ctgctggtcc
     2941 cagctcgtgg ccgggattta gtgtttggga gcccgttcct ggttctggtc caacaggtgt
     3001 cctgggtctg gggccaccag ggtctctgga gggtcgagga ggcagtggcc ctgcatgggc
     3061 cccagctgag agcagtccac tggatgttgg agagccaggc ttcctagggg accctgagct
     3121 tggctcccag gagctccagg acagccctct ggagccgtgg ggcctggatg tggactgtgc
     3181 aggcctggcc ctgaaggacg aggtggagag catcttccct gacttctttg cctgctagca
     3241 gccaggctgt ggagaggagg cgggcggggc cggtggatct ggagccgtgt gtgtccctgt
     3301 cgcgtgcttg ggcattttat tttgggtttg ggttgcagct gcaccctaat ttgagcgagg
     3361 cttacaggct gtgagaagag gatagtgaat attaaagagg gaaagcagtt ttcctggagg
     3421 aagcaaaa
//
