LOCUS       XM_047418963            6285 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens sine oculis binding protein homolog (SOBP),
            transcript variant X3, mRNA.
ACCESSION   XM_047418963
VERSION     XM_047418963.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000006.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6285
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
     gene            1..6285
                     /gene="SOBP"
                     /gene_synonym="JXC1; MRAMS"
                     /note="sine oculis binding protein homolog; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 12 ESTs, 43 long SRA reads, 3 Proteins, and
                     96% coverage of the annotated genomic feature by RNAseq
                     alignments, including 32 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:55084"
                     /db_xref="HGNC:HGNC:29256"
                     /db_xref="MIM:613667"
     CDS             501..3122
                     /gene="SOBP"
                     /gene_synonym="JXC1; MRAMS"
                     /codon_start=1
                     /product="sine oculis-binding protein homolog isoform X3"
                     /protein_id="XP_047274919.1"
                     /db_xref="GeneID:55084"
                     /db_xref="HGNC:HGNC:29256"
                     /db_xref="MIM:613667"
                     /translation="MAEMEKEGRPPENKRSRKPAHPVKREINEEMKNFAENTMNELLG
                     WYGYDKVELKDGEDIEFRSYPTDGESRQHISVLKENSLPKPKLPEDSVISPYNISTGY
                     SGLATGNGLSDSPAGSKDHGSVPIIVPLIPPPFIKPPAEDDVSNVQIMCAWCQKVGIK
                     RYSLSMGSEVKSFCSEKCFAACRRAYFKRNKARDEDGHAENFPQQHYAKETPRLAFKN
                     NCELLVCDWCKHIRHTKEYLDFGDGERRLQFCSAKCLNQYKMDIFYKETQANLPAGLC
                     STLHPPMENKAEGTGVQLLTPDSWNIPLTDARRKAPSPVATAGQSQGPGPSASTTVSP
                     SDTANCSVTKIPTPVPKSIPISETPNIPPVSVQPPASIGPPLGVPPRSPPMVMTNRGP
                     VPLPIFMEQQIMQQIRPPFIRGPPHHASNPNSPLSNPMLPGIGPPPGGPRNLGPTSSP
                     MHRPMLSPHIHPPSTPTMPGNPPGLLPPPPPGAPLPSLPFPPVSMMPNGPMPVPQMMN
                     FGLPSLAPLVPPPTLLVPYPVIVPLPVPIPIPIPIPHVSDSKPPNGFSSNGENFIPNA
                     PGDSAAAGGKPSGHSLSPRDSKQGSSKSADSPPGCSGQALSLAPTPAEHGRSEVVDLT
                     RRAGSPPGPPGAGGQLGFPGVLQGPQDGVIDLTVGHRARLHNVIHRALHAHVKAEREP
                     SAAERRTCGGCRDGHCSPPAAGDPGPGAPAGPEAAAACNVIVNGTRGAAAEGAKSAEP
                     PPEQPPPPPPPAPPKKLLSPEEPAVSELESVKENNCASNCHLDGEAAKKLMGEEALAG
                     GDKSDPNLNNPADEDHAYALRMLPKTGCVIQPVPKPAEKAAMAPCIISSPMLSAGPED
                     LEPPLKRRCLRIRNQNK"
     polyA_site      6285
                     /gene="SOBP"
                     /gene_synonym="JXC1; MRAMS"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gctctcccgg gctcacacac agccgcgcac gcacgcccgg ggccgctctc cgcgccggcc
       61 cttgctcccc gcgcccatgc ggacggaccg agcgacggaa gatggctgac gactccacgg
      121 ggccccgagg atgcggcccg gcggcggcgg cggcgggagc ggcagcggca gcgagggcgg
      181 caggggcagc ggcagcagcg gcggcgttgg ctgcggcggc ggcggcggcg gcagcaggag
      241 ccggagcgac ggcggcggca tccccgagac tctccgcact atccttaccc gtgacagcca
      301 ctgacgtcct ccgccgctag aagagacccc gcttctcggc gcctgccctc cccctcgcgg
      361 ctcggtccgg ccccgccagc accgctacct ccgccagcct cgccaccatc agcaccacct
      421 ccaccgccgc cgccgccgcc accaccaccg ccggcggcgg cagcagccat ttcatctcca
      481 cagaaaccag acacaaaaac atggcagaaa tggagaaaga agggagacct cccgaaaata
      541 aacggagcag gaagccggct cacccagtga aaagggagat caatgaggag atgaagaact
      601 ttgcagaaaa caccatgaat gaactccttg gctggtatgg ctatgataag gttgaattaa
      661 aagatggtga ggatattgaa ttcaggagct accctacaga tggggagagc cggcagcaca
      721 tttctgttct caaagaaaat tctttgccaa aaccaaaatt acccgaggac agtgttattt
      781 caccatacaa tataagcaca ggctattcag ggcttgccac tggaaatgga ctcagtgact
      841 cacctgcagg gtcaaaggat catggcagtg tgcccattat tgtaccttta attccaccac
      901 ctttcataaa gccaccagca gaagatgatg tgtcaaatgt acaaataatg tgtgcctggt
      961 gccagaaagt gggaatcaag cgctattccc tgagtatggg aagtgaggtg aaaagcttct
     1021 gcagcgagaa gtgctttgcg gcctgccgac gagcctactt caagagaaat aaggctagag
     1081 atgaagatgg acatgctgaa aattttcccc agcagcacta tgctaaggaa actccaaggc
     1141 ttgccttcaa gaataactgc gaactacttg tatgtgactg gtgtaagcac ataagacaca
     1201 caaaagaata cctggatttt ggggacgggg aaagaaggct tcagttctgc agtgcaaaat
     1261 gtctcaatca atacaaaatg gacattttct acaaagagac ccaggccaat cttccagctg
     1321 ggctgtgcag cacattacac cctcccatgg aaaataaagc agaaggcacc ggggtgcagc
     1381 tgctcactcc agactcttgg aatatcccgc taacagatgc tcggaggaag gccccctccc
     1441 cggtggctac agctggccaa agccagggcc ctggcccgtc ggcgtccacc accgtctctc
     1501 catctgacac tgccaactgc tctgtcacta aaatccccac gccagtgccc aagtccatcc
     1561 ccatcagcga gactccaaat atccctcctg tctccgtcca gccacctgct agcatcgggc
     1621 ctccccttgg cgtcccgcct cggagccctc ccatggtgat gaccaaccgc ggcccggtgc
     1681 cgctgcccat cttcatggag cagcagatca tgcagcagat ccgcccgccc ttcatccgcg
     1741 ggcctccgca ccatgcctcc aaccccaaca gccccctgtc caaccccatg cttcccggca
     1801 tcgggccccc gcccggtggc cccagaaacc tgggccccac ttccagcccc atgcaccggc
     1861 ccatgctatc gccccacatc caccccccga gcacccccac catgcccggg aaccccccag
     1921 gcctgctgcc cccgccgcct ccgggcgccc cgctgccgag tcttcccttc ccgccagtga
     1981 gcatgatgcc aaatggcccg atgccggtgc cccagatgat gaatttcggg ctgccgtcgc
     2041 ttgccccgct ggtgccgccc ccgaccctgc tcgtgccgta ccccgtgatc gtgcccctac
     2101 cggtgcccat ccccatcccc atccctatcc ctcacgtcag cgactccaag ccccccaacg
     2161 ggttctccag caacggggag aacttcattc cgaacgcccc tggcgactcc gcggcggcgg
     2221 gcggcaagcc aagcggacac tccctgtccc cccgggactc caagcagggc tcgtccaagt
     2281 ccgcggactc gccccccggc tgctcgggcc aggccctgag cctggcgccc acgcccgccg
     2341 agcatggccg gagcgaggtg gtggacctga cgcggcgcgc cggcagcccc ccgggccccc
     2401 cgggcgcggg cggccagctc ggcttcccag gcgtgctgca gggcccgcag gacggcgtca
     2461 tcgacctgac cgtgggccac cgagcccggc tgcacaacgt gatccaccgc gcgctgcacg
     2521 cgcacgtcaa ggcggagcgc gagccgagcg ccgcggagcg caggacctgc ggcggctgca
     2581 gggacggcca ctgcagcccg cccgccgccg gcgacccagg cccgggcgcc ccggcgggcc
     2641 ccgaggcggc cgcggcctgc aacgtcatcg tgaacggcac gcgcggcgcc gccgccgagg
     2701 gcgctaagag cgcggagccg cctcccgagc agccgccgcc gccgccgccg cccgcgcccc
     2761 ccaagaagct gctgtcgcct gaggaaccgg cggtgagcga gctagagtcg gtcaaggaga
     2821 ataactgtgc ttccaactgc cacctggacg gggaggcggc caaaaagctg atgggcgagg
     2881 aggccctggc ggggggcgac aagtcagacc cgaaccttaa taaccccgcg gacgaggacc
     2941 atgcctatgc tctgcggatg ctgcccaaga ccggctgcgt gatccagcct gtgccaaaac
     3001 ccgcggagaa ggctgccatg gcaccgtgca tcatctcctc gcccatgctc agcgccgggc
     3061 ctgaggacct ggagccgccg ctcaaaagga ggtgcctccg aattagaaat cagaataagt
     3121 aaaagatgta cccataacct tccatcttca gcaggactgg gactagagtg aagcaaagga
     3181 agggcttagg gcagagactt tgaggaggca cccactcagg gtcatgctag tgcagcactg
     3241 gtcctggctc tgtctccaga tccatatggc agctccctaa agctggtctc ctggccccct
     3301 ggactcgtcc ctggatggcc ttcagcaact ccccctgaaa tttcatggaa agttttatgt
     3361 gcctatgcac agaggcattt tcatgggaga agacgtccat agattttggc tccagaaaaa
     3421 gtatgctcta tatctctgaa ggattatctt accttattat ggagcaatat ctgagttgaa
     3481 atttttcttg tttctctgag gaagctgaat taatggaaag tttctcttaa aacttagaat
     3541 atattgtttg gcaatttctg ctgtgggcct aatattgcag aatcaaagtt ggagctacat
     3601 catgtagcac ttgcctcaat aagattgcct tagtgacaca atgcaaaagg ttacagactt
     3661 ttcttcaagt taccatttcc cacaagggcc tgtgatgaaa gaagaaaaga gaagcaagaa
     3721 aagaaataag ctagatactt ccccagcact tggaccttca aaatttgtac gatacaggga
     3781 gacactgttc ttctgtggaa agatcttcta ctctgccact gaggccaaga aagcagaatg
     3841 gccagagtca gagaggtgga caggtcggtg aacaccaggg cattgatgtg gcagtgtctg
     3901 ggagcgctgc caatgctccc tagctcccca gtatgcctct ttacttggag agactgcact
     3961 tggaaagaga cgcgttcggc cagctattaa ccagccgttg cccaggaggg cactggaaat
     4021 cagttccctg actggtttcc aatgagtcac tcccttgcca gcctaagctg ctgcctgtgc
     4081 accatgttca atcatttaca cctaccttca tgcagacaag tgctgcagag gggcagagat
     4141 gtctgaggac caaaatacgc tgcaccgtgg aacacttacc tcatgttgtg gaacacttac
     4201 cctcacccga acgccccgcc ttttccagac tttcctgtct aagagatcgt gccaaaggga
     4261 cgggggtggc catgctgttt tctcttaccg tgtcctgcac aacttatttt gtatccttcc
     4321 gttgccgttt taagtgcata gcactttcta tgtggatgga tgttaaggca atgcattctg
     4381 catgtgtaaa ctttttctta gggcctcaaa gggcataaac gaaattcatt cagagaaaga
     4441 aagaaattag ctttagaaaa taaacaattt agcactggca tcgtttaaca gggtcccatt
     4501 ctcaaggaaa tggggtaaat gccatttcag acaccagctc tgaatactaa ctgcagagag
     4561 ttcttctcca gatttgtgga tttccacagc acagaaaaaa aaaatagggt ggggtcagga
     4621 ttgggaacat gagaccatca acagggaggg gaagtacaca cacatgcaca aaacttattt
     4681 caagggtcat cgaaaagatt ctagtgaaaa atgactggag caaaagaaaa tgacaataac
     4741 aaaaacttgg aattattctc taatgcttta aaatagtccc aagtgtacta catagtttaa
     4801 aattggaaat cagtcaagtt acctaactct gccactcctt ggactgaatt aatgatcata
     4861 agcaaaaaat gcttgtgcaa ttgtactgtg tggtccagat gtacagccct gagtagagag
     4921 atgggggcag agcagacctg gctttccagg tagccaaggg gtcagggctg gggcaaatca
     4981 aagcttccag tgctcccagc ctcattccca tccagatatt tggctgcacc agcactagtt
     5041 gtctcatcat tttcccctct gaacctctgg tttgttgtct gtctttgata tagtaagctg
     5101 tgttttgttt tgggtaaaaa gggaagtaag aatgtgactg atagtattta aagaacaaaa
     5161 gggagaaacg cttcatgaat tcatttgata tggaacattg acctaacatc caaaaaaata
     5221 caactaaaaa gtagatcttt ccctcatttg catggcttat ttccccagat atgtttttgg
     5281 tattgaaaat gaatggtatt cccatacaac atgtgtctca atttgtaatg atatcctcct
     5341 tgcagctggc ttagttctgc aagtgtttct aaaatgttac tgtcttaaat ttgaaccaac
     5401 ctacaataac aaattatcta gaagcaaagt ggctaaacgg catttggaga gagaagggga
     5461 aaccctatat ttcatccttc aactcttgtt ttagaaattc agactgtaac gtgatctttt
     5521 tctaaagaaa tctacacaca cacactttaa aaactgtgca gcttgggtgt tgtgggagca
     5581 agaatgatca ggtttaagtt tctctgcaaa gctctgcatc ccatcaacaa gctcttttga
     5641 tattttaaac ccgtatttag agtaatttca agatatttgg agcacatgtg gttacatgta
     5701 aaactttgtc cttataatgt gttagatgct catactttaa atatttataa gcttttattt
     5761 atttatttat ttttattttt ttctgagatg gagtttcact ctgttgcccg gctggagtgc
     5821 agtgacgcga tctcggccca ctataacctc tgccttctgg gttcaagcaa ttctcctgcc
     5881 tcagcctccc aagtagctgg gattacaggc gcgcaccacc atgtccagct aatttttttt
     5941 tgtattttta gtagagatgg ggtttcaccc tgttggctag gatggtctcc atctcttgac
     6001 ctcatcatcc acctgtctag gcctcccaaa gtgctgggat tacaggtatg agccaccatg
     6061 cccagccttt ataagccatt tttaagtaat ttacccaaaa gctttctccc actagaatac
     6121 tataattgag tagtatctga gcatcattat agaagataca agatgaagtt gctgcagcat
     6181 gcattcacat tcttcttgct tttctggttt taattcaaat gtcattttta gtagaatcag
     6241 cttattttat tattttttaa atgtattaaa aaatcataaa caaga
//
