LOCUS       XM_047431290            7147 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens sorting nexin 27 (SNX27), transcript
            variant X4, mRNA.
ACCESSION   XM_047431290
VERSION     XM_047431290.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7147
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..7147
                     /gene="SNX27"
                     /gene_synonym="MRT1; MY014"
                     /note="sorting nexin 27; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 24 ESTs, 3982 long SRA reads, 3 Proteins, and 95%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 38 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:81609"
                     /db_xref="HGNC:HGNC:20073"
                     /db_xref="MIM:611541"
     CDS             391..1668
                     /gene="SNX27"
                     /gene_synonym="MRT1; MY014"
                     /codon_start=1
                     /product="sorting nexin-27 isoform X4"
                     /protein_id="XP_047287246.1"
                     /db_xref="GeneID:81609"
                     /db_xref="HGNC:HGNC:20073"
                     /db_xref="MIM:611541"
                     /translation="MNHVNVEGATHKQVVDLIRAGEKELILTVLSVPPHEADNLDPSD
                     DSLGQSFYDYTEKQAVPISVPRYKHVEQNGEKFVVYNVYMAGRQLCSKRYREFAILHQ
                     NLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEFLS
                     ESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQVYQAIAAKVGMDSTTVNYFALF
                     EVISHSFVRKLAPNEFPHKLYIQNYTSAVPGTCLTIRKWLFTTEEEILLNDNDLAVTY
                     FFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRTCEGYNEIIFPHCACDSR
                     RKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYARGEK
                     KPRWVKIFTPYFNYMHECFERVFCELKWRKEEY"
ORIGIN      
        1 accccgcgcc agcagctcgg tggccgagtc ggtcccgcgg ccggcggatc gggcgcgcgc
       61 gtcgggggtc gtccggctgc caggcagggc gagcacgcgc cgggaggcct tggaggcgta
      121 gggggcgggg gtacggctcg cctgctcgca agatggcgga cgaggacggg gaagggattc
      181 atccctcagc ccctcacagg aacggaggtg gcggcggcgg cggggggtct gggctccact
      241 gcgccgggaa cggcggcggg ggaggcggcg gcccgcgggt cgtgcgcatc gtcaagtccg
      301 agtccggcta cggcttcaac gtgcggggcc aagtgagcga gggcgggcaa ctgcggagca
      361 tcaacgggga gctgtacgcg ccgctgcagc atgaaccacg tgaatgttga gggggcgaca
      421 cacaagcagg tggtggacct gattcgagca ggcgagaagg aattgatctt gacagtgtta
      481 tctgtacctc ctcatgaggc agataaccta gatcccagtg acgactcgtt gggacaatca
      541 ttttatgatt acacagaaaa gcaagcagtg cccatatcgg tccccagata caaacatgtg
      601 gagcagaatg gtgagaagtt tgtggtatat aatgtttaca tggcagggag gcagctgtgt
      661 tctaagcggt accgggagtt tgctatccta caccagaacc tgaagagaga gtttgccaac
      721 tttacatttc ctcgactccc agggaagtgg ccattttcat tatcagaaca acaattagat
      781 gcccgacgtc ggggattgga agaatatcta gaaaaagtgt gttcaatacg agtaattggt
      841 gagagtgaca tcatgcagga attcctatca gaatccgatg agaactacaa tggtgtgtcc
      901 gacgtagagc tgagagtagc attaccagat ggaacaacgg ttacagtcag ggttaaaaag
      961 aacagtacta cagaccaagt atatcaggct atcgcagcaa aggttggcat ggacagtacg
     1021 acagtgaatt actttgcctt atttgaagtg atcagtcact cctttgtacg taaattggca
     1081 cctaatgagt ttcctcacaa actctacatt cagaattata catcagctgt gccaggcacc
     1141 tgcttgacca ttcgaaagtg gctttttaca acagaagaag aaattctctt aaatgacaat
     1201 gaccttgctg ttacctactt ctttcatcag gcagtcgatg atgtgaagaa aggttacatc
     1261 aaagcagaag aaaagtccta tcaattacag aagctatacg aacaaagaaa aatggtcatg
     1321 tacctcaaca tgctaaggac ttgtgagggc tacaatgaaa tcatctttcc ccactgtgcc
     1381 tgtgactcca ggaggaaggg gcacgttatc acagccatca gcatcacgca ctttaaactg
     1441 catgcctgca ctgaagaagg acagctggag aaccaggtaa ttgcatttga atgggatgag
     1501 atgcagcgat gggacacaga tgaagaaggg atggccttct gtttcgaata tgcacgagga
     1561 gagaagaagc cccgatgggt taaaatcttc acgccatatt tcaattacat gcatgagtgc
     1621 ttcgagaggg tgttctgcga gctcaagtgg agaaaagagg aatattagtt agagactgat
     1681 tatctcatgt gagccaggac attcttccag caaggttggc ctctggatgg tgaacgggct
     1741 gtgcaaaaaa gccctgcttc ttcccttgtc tagagggtgg acattggcta caggctcttc
     1801 catctctcat gacttcatgg accctcctct gccagttttt taaatcagat caccctccat
     1861 gttgttcctg acccacaggg gaagctgtcc tcagttgtag ccgtcttgac tggatgagtc
     1921 ctggcagtct ttctaggcga accaagaatg tttgtgtgag ggaaggtgtt tgctgttgct
     1981 ttactgctgt ctgtatgtgc cagtgctgga acagaatttg gaagattctg aataattagt
     2041 tacttattct caaagaaaat ctttgaaaga atcaggaggt caagtcaaga acatgaaaat
     2101 ttatatttta gtacagtaga aagaacattg ggctctggga attttatctg ggttttctcc
     2161 tggctttttt ttccctctgt gtaattttgg gtaaatcagc ctccctagct ttcagttttc
     2221 tcttctgtga aacaggaaga ctgaaccacg taattaatat ccaaggtccc ttccggctct
     2281 aaaaggctat gattctagat gagaagttat atcaagaaag atgtggccaa tcagattgag
     2341 tcatccaggc ataccttttt agcttctgtt tgtggagttg tctccagata agaggagatg
     2401 tgccttccca ataactcttt ttttttttcc tttcagaaca ttttccagat ggcgaggtca
     2461 cagcagagag atgtggccac ctagcctttc cttatcccct tcccttccct tcacccccat
     2521 cctcttactc ctttcatgtc ccatttcaga cagagtaacc attaacaaaa aagaagagaa
     2581 aaagttaaag tcgttatatt caaaagccct aaactaaata ttattaataa ccccctctga
     2641 atttcatgtc tctggaattg aggtggtagt gaacagcaga tcggtcagca ccagaagtca
     2701 actgagttaa ggcaggaaaa gaaataagcc caaccaactt gccaaaggta tctttgtcct
     2761 ttcacctggg cctcatacca acagcctctc cttgtactat atttttaaaa ctggaactat
     2821 gaacttcatc catttgcact gttcagacat atatatgtat gtatgtaaaa attatatata
     2881 cacaaattag ctgcacgtat atacatatat atatttcttt ttaaatttca tattgatggc
     2941 agtacctttt ttagcttgtg tttttacaca cctttcacta gaatccatga cctccctcgt
     3001 gctctctttc ttttgaaaca aactttaaaa aggaaaaaaa agcattttac agggaaaaat
     3061 acctctcctc atgaaggact tgaaaagttt acaacctgct tggatttttg cccctttttt
     3121 tgtattgagt atagattccg gctcatgggt tgccatagag tctaggaaca aggagtatag
     3181 tttctttatc ttccaagagg gtgctgggga ggagaaagag gtgtgtttct caaggttaac
     3241 aggctgtagt tctgcaggga gagcctgaag tcctggtatg ggctcttgat tctgtgacaa
     3301 tttttttgat ccatctattt ctctcactcc tggctttcta gccacattct gcacctcctt
     3361 cctgctttcc tagagcctcg gtatgctttc cctcaaccga ccctggctca ggaggttgat
     3421 gccatgggaa cctgaacctg aaacacttca tggtagtaat ttcctgtttt ccttgccttt
     3481 tttttttttt tttttttttt tttctgagac agggtcttac tctgtcgccc agactggaat
     3541 gtggtggcat gaacatagct cactgttacc ttgaattctg ggctcaggtg atccttccgc
     3601 ctcaccctcc tgagtagctg ggactacagg tgtgcaccac cacacctggc taattcttct
     3661 taaaattttt ttgtagagac agggtctcac tatgttgccc aggctggtct caaactcctg
     3721 gcctcaggtg atcctcttgt ctcagcctcc caaagtgctg ggattacagg catgagccac
     3781 tgtgtccttc cctgcctttt ttgcagcagg gatagtactc aggaccagag ttaagctgat
     3841 accttaggca cacaggttgg acttacatag aggaaagaaa gcaagaaatg ccctatgtac
     3901 atgaggtttt acctcctcca ttcctgacca ataaccaccc ataactacgg cattctctgt
     3961 gacttcctta aacagcagtg atgggaaggg atccaatagt atcttcaagg ccttggggaa
     4021 acttgcagtg ggtcagtggt ctgtgccaac caaacgatag ccccatccaa gccagctgag
     4081 aacctaggaa ggagtagtag gaatatggtt gattagattg gatctcccaa gttttaattg
     4141 aaaggagact gaacgaaaac ctttctgctt tctgtccgtt aaagagctcc tcatctgatc
     4201 ttgcagctag accctttgag acttaagagc tgcatcccag gatcagaagc cagggctaat
     4261 tggggtagga caatattccc agcccctaag ctctgtagat aatgcataag aagcaccaag
     4321 tcaggctcag atgcaactaa aacacatctt tgagcctttt ctttttccct tctccccttt
     4381 ctaaacaaaa accttcctag gatggcatct tttgctctaa ctgggagaca gtcataattg
     4441 gttgtagtca attctactaa gcagtgttgg ggtggttgga aagtctcttt tttgtaattt
     4501 gtttttgcaa atcattgtga ggccactttt tctttctttc tttctttctt tctttctttc
     4561 tttctttctt tcgttctttc gttctttcgt tctttctttc tttctttctt tctctttctt
     4621 tcttttgctt tccttctttc atctcttttt tgtaatttgt tgttgcaaat cattgtgagg
     4681 ccacttttct ttccccttcc ttccttcctt tttttctgtt tttttttttt ttttttccca
     4741 gagtcttgct ctgtcgccca ggttggagtg cagtggcacg atctcggctc actgcaccct
     4801 ctgcctcttg ggttcaagcg attctcctgc ctcagcctcc caagtagctg ggattacagg
     4861 catacaccac cacgccccac taattttttg tatttttggt agggcggggt ttcaccatga
     4921 tggccaggtt ggttttgaac tcctgacctc aagtaatctg cccacctcgg cctcccaaag
     4981 tgctaggatt acaggagtga gccactgcgc ctggcccact tttctttctt tccttcttat
     5041 tttgttatgc tggcagccat ttgcccctgc atggtatggg atcaaagagg acagcctttc
     5101 ctccctcacc ttctccaaat ctaggtgaaa tcacagagta caaaacgtga gaatgctgaa
     5161 tgtgtaaagt tgcagaggga tccctaattt gaagactttg acacagaact aacttctttt
     5221 gacttaaatg aatttaaaat gagccaaagg accctgaaaa gaagacatgt tgatttccca
     5281 ctcctagatg ctaaagagac ttggcaccag ctttgttcaa actgtaaaaa tagcaatttg
     5341 cccctactcg ctcagagtgg gacagtagtg aacagagctg ggattccatg cgacagcttg
     5401 aatgctgacc ttcagacatg agacataggg atttggaggc cccttagaat gggtagatgg
     5461 tgttatgttc cctttctggc atagcattca cttggtgctt tggagattag gtgagggccc
     5521 tataggtagt tggcctgttg gcagaattta tttaggaaca gcccttttga aagtgtccca
     5581 gtaacaacgc acccagctgc agcaaggagg tggggaagga gggcacccca aaggacagcg
     5641 ccttcttctc ttccacccat gcacggcctt gggtgatgga ggcgggttcc ctgtggctgc
     5701 gtggatccca taggatcaag cccttctttg catgaagcag tgttgtgact cttctctctc
     5761 cccttcctct gcacttcctt tctgtaatcc ctactgttct tcttagtccc agcttctgcc
     5821 cagggaggct tctacccaga cttcttttgc aatttgtccc tgggaagagg gggtctccca
     5881 gtgcccccag cttcatccca gcagaaccag caggatcctc ctggtctctc actggccttc
     5941 ctccacactt ggtttctatc ctcaggggta gaagctcaga gctttttatg gcccaggaga
     6001 aaatgtagac cctgagaaac ctgtccctgc agaaaggttc ccttgggcca tgctttgggc
     6061 cctctgctct ttatatgttt attctattct ccatttttcc accccgtcct taccctaggc
     6121 ctaaacacag gtacagatat gtgcatgctc agggcagctc ctaggcctgg actgagctct
     6181 caggggggaa ttagataaat attccaacat cctcatgcct ggcccattta gtttcatcct
     6241 ttagttaccc aggccagtag ctttgggtta tcccttcctg tagctccaaa cccagcactt
     6301 ggagcagcaa aatagggcac tgacaggaga tgaaactctc tcctatctca gaatttgcca
     6361 acttctgggc tgggctccta ggaggtagtt ttcttgaagg ggactgcatc ctagttgacc
     6421 tgaattttcc agaccaggag ggactgctgt gctctccctt ctcgccatca tactgtttgg
     6481 ctagattcat tcagcagtag aagctgtttg atctgttgac cccagcatac tgctgtttct
     6541 tcaccagctt cattgtgtca cagtagcttc ctttgggagg atgatgtgat agaacactca
     6601 gagagaggga gggagaagag agatagtggg tatgcttctc tagctcccca tcttccaggt
     6661 ccacctcttg acttcctgtt cccctaaacc tgagcacatc acgccaggcc tctttgctgc
     6721 caggacagca tcagctcact cctcagcaat aatctagggt atgtgggaag gtcagggctg
     6781 tggtaaggaa tagaatcaaa gaggggagtg atacggggtg ggggcacttg gccgcctgct
     6841 aaacttggac attaatttta tatcatgacc cccttttaag ccagtgagct gggcttcagt
     6901 ttttcccagg ccatgcacat ttaatttatt tcagagaaac tctaattgta ttttcactgc
     6961 agtatcttgt attttttatt tgtgatttaa gaaatgtgaa gagaaaatac acagacacaa
     7021 taatggctaa cattgtttct ttcattcctt gttctagagc taaccactct aaaattgttt
     7081 ggtaatgtca cttagtgtaa ttaattgtaa catattcttt taaataaatt gatttattga
     7141 tcaaaca
//
