LOCUS       XM_011510024            6138 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens sorting nexin 27 (SNX27), transcript
            variant X1, mRNA.
ACCESSION   XM_011510024
VERSION     XM_011510024.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011510024.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6138
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..6138
                     /gene="SNX27"
                     /gene_synonym="MRT1; MY014"
                     /note="sorting nexin 27; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 24 ESTs, 3895 long SRA reads, 5 Proteins, and 94%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 24 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:81609"
                     /db_xref="HGNC:HGNC:20073"
                     /db_xref="MIM:611541"
     CDS             153..1475
                     /gene="SNX27"
                     /gene_synonym="MRT1; MY014"
                     /codon_start=1
                     /product="sorting nexin-27 isoform X1"
                     /protein_id="XP_011508326.1"
                     /db_xref="GeneID:81609"
                     /db_xref="HGNC:HGNC:20073"
                     /db_xref="MIM:611541"
                     /translation="MADEDGEGIHPSAPHRNGGGGGGGGSGLHCAGNGGGGGGGPRVV
                     RIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVYNVYMAGRQLCSKRYREFAIL
                     HQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEF
                     LSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQVYQAIAAKVGMDSTTVNYFA
                     LFEVISHSFVRKLAPNEFPHKLYIQNYTSAVPGTCLTIRKWLFTTEEEILLNDNDLAV
                     TYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRTCEGYNEIIFPHCACD
                     SRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYARG
                     EKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRDVAT"
ORIGIN      
        1 accccgcgcc agcagctcgg tggccgagtc ggtcccgcgg ccggcggatc gggcgcgcgc
       61 gtcgggggtc gtccggctgc caggcagggc gagcacgcgc cgggaggcct tggaggcgta
      121 gggggcgggg gtacggctcg cctgctcgca agatggcgga cgaggacggg gaagggattc
      181 atccctcagc ccctcacagg aacggaggtg gcggcggcgg cggggggtct gggctccact
      241 gcgccgggaa cggcggcggg ggaggcggcg gcccgcgggt cgtgcgcatc gtcaagtccg
      301 agtccggcta cggcttcaac gtgcggggcc aagtgagcga gggcgggcaa ctgcggagca
      361 tcaacgggga gctgtacgcg ccgctgcagc atgtatataa tgtttacatg gcagggaggc
      421 agctgtgttc taagcggtac cgggagtttg ctatcctaca ccagaacctg aagagagagt
      481 ttgccaactt tacatttcct cgactcccag ggaagtggcc attttcatta tcagaacaac
      541 aattagatgc ccgacgtcgg ggattggaag aatatctaga aaaagtgtgt tcaatacgag
      601 taattggtga gagtgacatc atgcaggaat tcctatcaga atccgatgag aactacaatg
      661 gtgtgtccga cgtagagctg agagtagcat taccagatgg aacaacggtt acagtcaggg
      721 ttaaaaagaa cagtactaca gaccaagtat atcaggctat cgcagcaaag gttggcatgg
      781 acagtacgac agtgaattac tttgccttat ttgaagtgat cagtcactcc tttgtacgta
      841 aattggcacc taatgagttt cctcacaaac tctacattca gaattataca tcagctgtgc
      901 caggcacctg cttgaccatt cgaaagtggc tttttacaac agaagaagaa attctcttaa
      961 atgacaatga ccttgctgtt acctacttct ttcatcaggc agtcgatgat gtgaagaaag
     1021 gttacatcaa agcagaagaa aagtcctatc aattacagaa gctatacgaa caaagaaaaa
     1081 tggtcatgta cctcaacatg ctaaggactt gtgagggcta caatgaaatc atctttcccc
     1141 actgtgcctg tgactccagg aggaaggggc acgttatcac agccatcagc atcacgcact
     1201 ttaaactgca tgcctgcact gaagaaggac agctggagaa ccaggtaatt gcatttgaat
     1261 gggatgagat gcagcgatgg gacacagatg aagaagggat ggccttctgt ttcgaatatg
     1321 cacgaggaga gaagaagccc cgatgggtta aaatcttcac gccatatttc aattacatgc
     1381 atgagtgctt cgagagggtg ttctgcgagc tcaagtggag aaaagagaac attttccaga
     1441 tggcgaggtc acagcagaga gatgtggcca cctagccttt ccttatcccc ttcccttccc
     1501 ttcaccccca tcctcttact cctttcatgt cccatttcag acagagtaac cattaacaaa
     1561 aaagaagaga aaaagttaaa gtcgttatat tcaaaagccc taaactaaat attattaata
     1621 accccctctg aatttcatgt ctctggaatt gaggtggtag tgaacagcag atcggtcagc
     1681 accagaagtc aactgagtta aggcaggaaa agaaataagc ccaaccaact tgccaaaggt
     1741 atctttgtcc tttcacctgg gcctcatacc aacagcctct ccttgtacta tatttttaaa
     1801 actggaacta tgaacttcat ccatttgcac tgttcagaca tatatatgta tgtatgtaaa
     1861 aattatatat acacaaatta gctgcacgta tatacatata tatatttctt tttaaatttc
     1921 atattgatgg cagtaccttt tttagcttgt gtttttacac acctttcact agaatccatg
     1981 acctccctcg tgctctcttt cttttgaaac aaactttaaa aaggaaaaaa aagcatttta
     2041 cagggaaaaa tacctctcct catgaaggac ttgaaaagtt tacaacctgc ttggattttt
     2101 gccccttttt ttgtattgag tatagattcc ggctcatggg ttgccataga gtctaggaac
     2161 aaggagtata gtttctttat cttccaagag ggtgctgggg aggagaaaga ggtgtgtttc
     2221 tcaaggttaa caggctgtag ttctgcaggg agagcctgaa gtcctggtat gggctcttga
     2281 ttctgtgaca atttttttga tccatctatt tctctcactc ctggctttct agccacattc
     2341 tgcacctcct tcctgctttc ctagagcctc ggtatgcttt ccctcaaccg accctggctc
     2401 aggaggttga tgccatggga acctgaacct gaaacacttc atggtagtaa tttcctgttt
     2461 tccttgcctt tttttttttt tttttttttt ttttctgaga cagggtctta ctctgtcgcc
     2521 cagactggaa tgtggtggca tgaacatagc tcactgttac cttgaattct gggctcaggt
     2581 gatccttccg cctcaccctc ctgagtagct gggactacag gtgtgcacca ccacacctgg
     2641 ctaattcttc ttaaaatttt tttgtagaga cagggtctca ctatgttgcc caggctggtc
     2701 tcaaactcct ggcctcaggt gatcctcttg tctcagcctc ccaaagtgct gggattacag
     2761 gcatgagcca ctgtgtcctt ccctgccttt tttgcagcag ggatagtact caggaccaga
     2821 gttaagctga taccttaggc acacaggttg gacttacata gaggaaagaa agcaagaaat
     2881 gccctatgta catgaggttt tacctcctcc attcctgacc aataaccacc cataactacg
     2941 gcattctctg tgacttcctt aaacagcagt gatgggaagg gatccaatag tatcttcaag
     3001 gccttgggga aacttgcagt gggtcagtgg tctgtgccaa ccaaacgata gccccatcca
     3061 agccagctga gaacctagga aggagtagta ggaatatggt tgattagatt ggatctccca
     3121 agttttaatt gaaaggagac tgaacgaaaa cctttctgct ttctgtccgt taaagagctc
     3181 ctcatctgat cttgcagcta gaccctttga gacttaagag ctgcatccca ggatcagaag
     3241 ccagggctaa ttggggtagg acaatattcc cagcccctaa gctctgtaga taatgcataa
     3301 gaagcaccaa gtcaggctca gatgcaacta aaacacatct ttgagccttt tctttttccc
     3361 ttctcccctt tctaaacaaa aaccttccta ggatggcatc ttttgctcta actgggagac
     3421 agtcataatt ggttgtagtc aattctacta agcagtgttg gggtggttgg aaagtctctt
     3481 ttttgtaatt tgtttttgca aatcattgtg aggccacttt ttctttcttt ctttctttct
     3541 ttctttcttt ctttctttct ttcgttcttt cgttctttcg ttctttcttt ctttctttct
     3601 ttctctttct ttcttttgct ttccttcttt catctctttt ttgtaatttg ttgttgcaaa
     3661 tcattgtgag gccacttttc tttccccttc cttccttcct ttttttctgt tttttttttt
     3721 tttttttccc agagtcttgc tctgtcgccc aggttggagt gcagtggcac gatctcggct
     3781 cactgcaccc tctgcctctt gggttcaagc gattctcctg cctcagcctc ccaagtagct
     3841 gggattacag gcatacacca ccacgcccca ctaatttttt gtatttttgg tagggcgggg
     3901 tttcaccatg atggccaggt tggttttgaa ctcctgacct caagtaatct gcccacctcg
     3961 gcctcccaaa gtgctaggat tacaggagtg agccactgcg cctggcccac ttttctttct
     4021 ttccttctta ttttgttatg ctggcagcca tttgcccctg catggtatgg gatcaaagag
     4081 gacagccttt cctccctcac cttctccaaa tctaggtgaa atcacagagt acaaaacgtg
     4141 agaatgctga atgtgtaaag ttgcagaggg atccctaatt tgaagacttt gacacagaac
     4201 taacttcttt tgacttaaat gaatttaaaa tgagccaaag gaccctgaaa agaagacatg
     4261 ttgatttccc actcctagat gctaaagaga cttggcacca gctttgttca aactgtaaaa
     4321 atagcaattt gcccctactc gctcagagtg ggacagtagt gaacagagct gggattccat
     4381 gcgacagctt gaatgctgac cttcagacat gagacatagg gatttggagg ccccttagaa
     4441 tgggtagatg gtgttatgtt ccctttctgg catagcattc acttggtgct ttggagatta
     4501 ggtgagggcc ctataggtag ttggcctgtt ggcagaattt atttaggaac agcccttttg
     4561 aaagtgtccc agtaacaacg cacccagctg cagcaaggag gtggggaagg agggcacccc
     4621 aaaggacagc gccttcttct cttccaccca tgcacggcct tgggtgatgg aggcgggttc
     4681 cctgtggctg cgtggatccc ataggatcaa gcccttcttt gcatgaagca gtgttgtgac
     4741 tcttctctct ccccttcctc tgcacttcct ttctgtaatc cctactgttc ttcttagtcc
     4801 cagcttctgc ccagggaggc ttctacccag acttcttttg caatttgtcc ctgggaagag
     4861 ggggtctccc agtgccccca gcttcatccc agcagaacca gcaggatcct cctggtctct
     4921 cactggcctt cctccacact tggtttctat cctcaggggt agaagctcag agctttttat
     4981 ggcccaggag aaaatgtaga ccctgagaaa cctgtccctg cagaaaggtt cccttgggcc
     5041 atgctttggg ccctctgctc tttatatgtt tattctattc tccatttttc caccccgtcc
     5101 ttaccctagg cctaaacaca ggtacagata tgtgcatgct cagggcagct cctaggcctg
     5161 gactgagctc tcagggggga attagataaa tattccaaca tcctcatgcc tggcccattt
     5221 agtttcatcc tttagttacc caggccagta gctttgggtt atcccttcct gtagctccaa
     5281 acccagcact tggagcagca aaatagggca ctgacaggag atgaaactct ctcctatctc
     5341 agaatttgcc aacttctggg ctgggctcct aggaggtagt tttcttgaag gggactgcat
     5401 cctagttgac ctgaattttc cagaccagga gggactgctg tgctctccct tctcgccatc
     5461 atactgtttg gctagattca ttcagcagta gaagctgttt gatctgttga ccccagcata
     5521 ctgctgtttc ttcaccagct tcattgtgtc acagtagctt cctttgggag gatgatgtga
     5581 tagaacactc agagagaggg agggagaaga gagatagtgg gtatgcttct ctagctcccc
     5641 atcttccagg tccacctctt gacttcctgt tcccctaaac ctgagcacat cacgccaggc
     5701 ctctttgctg ccaggacagc atcagctcac tcctcagcaa taatctaggg tatgtgggaa
     5761 ggtcagggct gtggtaagga atagaatcaa agaggggagt gatacggggt gggggcactt
     5821 ggccgcctgc taaacttgga cattaatttt atatcatgac ccccttttaa gccagtgagc
     5881 tgggcttcag tttttcccag gccatgcaca tttaatttat ttcagagaaa ctctaattgt
     5941 attttcactg cagtatcttg tattttttat ttgtgattta agaaatgtga agagaaaata
     6001 cacagacaca ataatggcta acattgtttc tttcattcct tgttctagag ctaaccactc
     6061 taaaattgtt tggtaatgtc acttagtgta attaattgta acatattctt ttaaataaat
     6121 tgatttattg atcaaaca
//
