LOCUS       XM_005245511            7087 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens sorting nexin 27 (SNX27), transcript
            variant X7, mRNA.
ACCESSION   XM_005245511
VERSION     XM_005245511.5
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_005245511.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7087
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..7087
                     /gene="SNX27"
                     /gene_synonym="MRT1; MY014"
                     /note="sorting nexin 27; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 24 ESTs, 3977 long SRA reads, 3 Proteins, and 95%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 32 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:81609"
                     /db_xref="HGNC:HGNC:20073"
                     /db_xref="MIM:611541"
     CDS             580..1608
                     /gene="SNX27"
                     /gene_synonym="MRT1; MY014"
                     /codon_start=1
                     /product="sorting nexin-27 isoform X7"
                     /protein_id="XP_005245568.1"
                     /db_xref="GeneID:81609"
                     /db_xref="HGNC:HGNC:20073"
                     /db_xref="MIM:611541"
                     /translation="MAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQ
                     QLDARRRGLEEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVT
                     VRVKKNSTTDQVYQAIAAKVGMDSTTVNYFALFEVISHSFVRKLAPNEFPHKLYIQNY
                     TSAVPGTCLTIRKWLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQK
                     LYEQRKMVMYLNMLRTCEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQL
                     ENQVIAFEWDEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCE
                     LKWRKEEY"
ORIGIN      
        1 accccgcgcc agcagctcgg tggccgagtc ggtcccgcgg ccggcggatc gggcgcgcgc
       61 gtcgggggtc gtccggctgc caggcagggc gagcacgcgc cgggaggcct tggaggcgta
      121 gggggcgggg gtacggctcg cctgctcgca agatggcgga cgaggacggg gaagggattc
      181 atccctcagc ccctcacagg aacggaggtg gcggcggcgg cggggggtct gggctccact
      241 gcgccgggaa cggcggcggg ggaggcggcg gcccgcgggt cgtgcgcatc gtcaagtccg
      301 agtccggcta cggcttcaac gtgcggggcc aagaaccacg tgaatgttga gggggcgaca
      361 cacaagcagg tggtggacct gattcgagca ggcgagaagg aattgatctt gacagtgtta
      421 tctgtacctc ctcatgaggc agataaccta gatcccagtg acgactcgtt gggacaatca
      481 ttttatgatt acacagaaaa gcaagcagtg cccatatcgg tccccagata caaacatgtg
      541 gagcagaatg gtgagaagtt tgtggtatat aatgtttaca tggcagggag gcagctgtgt
      601 tctaagcggt accgggagtt tgctatccta caccagaacc tgaagagaga gtttgccaac
      661 tttacatttc ctcgactccc agggaagtgg ccattttcat tatcagaaca acaattagat
      721 gcccgacgtc ggggattgga agaatatcta gaaaaagtgt gttcaatacg agtaattggt
      781 gagagtgaca tcatgcagga attcctatca gaatccgatg agaactacaa tggtgtgtcc
      841 gacgtagagc tgagagtagc attaccagat ggaacaacgg ttacagtcag ggttaaaaag
      901 aacagtacta cagaccaagt atatcaggct atcgcagcaa aggttggcat ggacagtacg
      961 acagtgaatt actttgcctt atttgaagtg atcagtcact cctttgtacg taaattggca
     1021 cctaatgagt ttcctcacaa actctacatt cagaattata catcagctgt gccaggcacc
     1081 tgcttgacca ttcgaaagtg gctttttaca acagaagaag aaattctctt aaatgacaat
     1141 gaccttgctg ttacctactt ctttcatcag gcagtcgatg atgtgaagaa aggttacatc
     1201 aaagcagaag aaaagtccta tcaattacag aagctatacg aacaaagaaa aatggtcatg
     1261 tacctcaaca tgctaaggac ttgtgagggc tacaatgaaa tcatctttcc ccactgtgcc
     1321 tgtgactcca ggaggaaggg gcacgttatc acagccatca gcatcacgca ctttaaactg
     1381 catgcctgca ctgaagaagg acagctggag aaccaggtaa ttgcatttga atgggatgag
     1441 atgcagcgat gggacacaga tgaagaaggg atggccttct gtttcgaata tgcacgagga
     1501 gagaagaagc cccgatgggt taaaatcttc acgccatatt tcaattacat gcatgagtgc
     1561 ttcgagaggg tgttctgcga gctcaagtgg agaaaagagg aatattagtt agagactgat
     1621 tatctcatgt gagccaggac attcttccag caaggttggc ctctggatgg tgaacgggct
     1681 gtgcaaaaaa gccctgcttc ttcccttgtc tagagggtgg acattggcta caggctcttc
     1741 catctctcat gacttcatgg accctcctct gccagttttt taaatcagat caccctccat
     1801 gttgttcctg acccacaggg gaagctgtcc tcagttgtag ccgtcttgac tggatgagtc
     1861 ctggcagtct ttctaggcga accaagaatg tttgtgtgag ggaaggtgtt tgctgttgct
     1921 ttactgctgt ctgtatgtgc cagtgctgga acagaatttg gaagattctg aataattagt
     1981 tacttattct caaagaaaat ctttgaaaga atcaggaggt caagtcaaga acatgaaaat
     2041 ttatatttta gtacagtaga aagaacattg ggctctggga attttatctg ggttttctcc
     2101 tggctttttt ttccctctgt gtaattttgg gtaaatcagc ctccctagct ttcagttttc
     2161 tcttctgtga aacaggaaga ctgaaccacg taattaatat ccaaggtccc ttccggctct
     2221 aaaaggctat gattctagat gagaagttat atcaagaaag atgtggccaa tcagattgag
     2281 tcatccaggc ataccttttt agcttctgtt tgtggagttg tctccagata agaggagatg
     2341 tgccttccca ataactcttt ttttttttcc tttcagaaca ttttccagat ggcgaggtca
     2401 cagcagagag atgtggccac ctagcctttc cttatcccct tcccttccct tcacccccat
     2461 cctcttactc ctttcatgtc ccatttcaga cagagtaacc attaacaaaa aagaagagaa
     2521 aaagttaaag tcgttatatt caaaagccct aaactaaata ttattaataa ccccctctga
     2581 atttcatgtc tctggaattg aggtggtagt gaacagcaga tcggtcagca ccagaagtca
     2641 actgagttaa ggcaggaaaa gaaataagcc caaccaactt gccaaaggta tctttgtcct
     2701 ttcacctggg cctcatacca acagcctctc cttgtactat atttttaaaa ctggaactat
     2761 gaacttcatc catttgcact gttcagacat atatatgtat gtatgtaaaa attatatata
     2821 cacaaattag ctgcacgtat atacatatat atatttcttt ttaaatttca tattgatggc
     2881 agtacctttt ttagcttgtg tttttacaca cctttcacta gaatccatga cctccctcgt
     2941 gctctctttc ttttgaaaca aactttaaaa aggaaaaaaa agcattttac agggaaaaat
     3001 acctctcctc atgaaggact tgaaaagttt acaacctgct tggatttttg cccctttttt
     3061 tgtattgagt atagattccg gctcatgggt tgccatagag tctaggaaca aggagtatag
     3121 tttctttatc ttccaagagg gtgctgggga ggagaaagag gtgtgtttct caaggttaac
     3181 aggctgtagt tctgcaggga gagcctgaag tcctggtatg ggctcttgat tctgtgacaa
     3241 tttttttgat ccatctattt ctctcactcc tggctttcta gccacattct gcacctcctt
     3301 cctgctttcc tagagcctcg gtatgctttc cctcaaccga ccctggctca ggaggttgat
     3361 gccatgggaa cctgaacctg aaacacttca tggtagtaat ttcctgtttt ccttgccttt
     3421 tttttttttt tttttttttt tttctgagac agggtcttac tctgtcgccc agactggaat
     3481 gtggtggcat gaacatagct cactgttacc ttgaattctg ggctcaggtg atccttccgc
     3541 ctcaccctcc tgagtagctg ggactacagg tgtgcaccac cacacctggc taattcttct
     3601 taaaattttt ttgtagagac agggtctcac tatgttgccc aggctggtct caaactcctg
     3661 gcctcaggtg atcctcttgt ctcagcctcc caaagtgctg ggattacagg catgagccac
     3721 tgtgtccttc cctgcctttt ttgcagcagg gatagtactc aggaccagag ttaagctgat
     3781 accttaggca cacaggttgg acttacatag aggaaagaaa gcaagaaatg ccctatgtac
     3841 atgaggtttt acctcctcca ttcctgacca ataaccaccc ataactacgg cattctctgt
     3901 gacttcctta aacagcagtg atgggaaggg atccaatagt atcttcaagg ccttggggaa
     3961 acttgcagtg ggtcagtggt ctgtgccaac caaacgatag ccccatccaa gccagctgag
     4021 aacctaggaa ggagtagtag gaatatggtt gattagattg gatctcccaa gttttaattg
     4081 aaaggagact gaacgaaaac ctttctgctt tctgtccgtt aaagagctcc tcatctgatc
     4141 ttgcagctag accctttgag acttaagagc tgcatcccag gatcagaagc cagggctaat
     4201 tggggtagga caatattccc agcccctaag ctctgtagat aatgcataag aagcaccaag
     4261 tcaggctcag atgcaactaa aacacatctt tgagcctttt ctttttccct tctccccttt
     4321 ctaaacaaaa accttcctag gatggcatct tttgctctaa ctgggagaca gtcataattg
     4381 gttgtagtca attctactaa gcagtgttgg ggtggttgga aagtctcttt tttgtaattt
     4441 gtttttgcaa atcattgtga ggccactttt tctttctttc tttctttctt tctttctttc
     4501 tttctttctt tcgttctttc gttctttcgt tctttctttc tttctttctt tctctttctt
     4561 tcttttgctt tccttctttc atctcttttt tgtaatttgt tgttgcaaat cattgtgagg
     4621 ccacttttct ttccccttcc ttccttcctt tttttctgtt tttttttttt ttttttccca
     4681 gagtcttgct ctgtcgccca ggttggagtg cagtggcacg atctcggctc actgcaccct
     4741 ctgcctcttg ggttcaagcg attctcctgc ctcagcctcc caagtagctg ggattacagg
     4801 catacaccac cacgccccac taattttttg tatttttggt agggcggggt ttcaccatga
     4861 tggccaggtt ggttttgaac tcctgacctc aagtaatctg cccacctcgg cctcccaaag
     4921 tgctaggatt acaggagtga gccactgcgc ctggcccact tttctttctt tccttcttat
     4981 tttgttatgc tggcagccat ttgcccctgc atggtatggg atcaaagagg acagcctttc
     5041 ctccctcacc ttctccaaat ctaggtgaaa tcacagagta caaaacgtga gaatgctgaa
     5101 tgtgtaaagt tgcagaggga tccctaattt gaagactttg acacagaact aacttctttt
     5161 gacttaaatg aatttaaaat gagccaaagg accctgaaaa gaagacatgt tgatttccca
     5221 ctcctagatg ctaaagagac ttggcaccag ctttgttcaa actgtaaaaa tagcaatttg
     5281 cccctactcg ctcagagtgg gacagtagtg aacagagctg ggattccatg cgacagcttg
     5341 aatgctgacc ttcagacatg agacataggg atttggaggc cccttagaat gggtagatgg
     5401 tgttatgttc cctttctggc atagcattca cttggtgctt tggagattag gtgagggccc
     5461 tataggtagt tggcctgttg gcagaattta tttaggaaca gcccttttga aagtgtccca
     5521 gtaacaacgc acccagctgc agcaaggagg tggggaagga gggcacccca aaggacagcg
     5581 ccttcttctc ttccacccat gcacggcctt gggtgatgga ggcgggttcc ctgtggctgc
     5641 gtggatccca taggatcaag cccttctttg catgaagcag tgttgtgact cttctctctc
     5701 cccttcctct gcacttcctt tctgtaatcc ctactgttct tcttagtccc agcttctgcc
     5761 cagggaggct tctacccaga cttcttttgc aatttgtccc tgggaagagg gggtctccca
     5821 gtgcccccag cttcatccca gcagaaccag caggatcctc ctggtctctc actggccttc
     5881 ctccacactt ggtttctatc ctcaggggta gaagctcaga gctttttatg gcccaggaga
     5941 aaatgtagac cctgagaaac ctgtccctgc agaaaggttc ccttgggcca tgctttgggc
     6001 cctctgctct ttatatgttt attctattct ccatttttcc accccgtcct taccctaggc
     6061 ctaaacacag gtacagatat gtgcatgctc agggcagctc ctaggcctgg actgagctct
     6121 caggggggaa ttagataaat attccaacat cctcatgcct ggcccattta gtttcatcct
     6181 ttagttaccc aggccagtag ctttgggtta tcccttcctg tagctccaaa cccagcactt
     6241 ggagcagcaa aatagggcac tgacaggaga tgaaactctc tcctatctca gaatttgcca
     6301 acttctgggc tgggctccta ggaggtagtt ttcttgaagg ggactgcatc ctagttgacc
     6361 tgaattttcc agaccaggag ggactgctgt gctctccctt ctcgccatca tactgtttgg
     6421 ctagattcat tcagcagtag aagctgtttg atctgttgac cccagcatac tgctgtttct
     6481 tcaccagctt cattgtgtca cagtagcttc ctttgggagg atgatgtgat agaacactca
     6541 gagagaggga gggagaagag agatagtggg tatgcttctc tagctcccca tcttccaggt
     6601 ccacctcttg acttcctgtt cccctaaacc tgagcacatc acgccaggcc tctttgctgc
     6661 caggacagca tcagctcact cctcagcaat aatctagggt atgtgggaag gtcagggctg
     6721 tggtaaggaa tagaatcaaa gaggggagtg atacggggtg ggggcacttg gccgcctgct
     6781 aaacttggac attaatttta tatcatgacc cccttttaag ccagtgagct gggcttcagt
     6841 ttttcccagg ccatgcacat ttaatttatt tcagagaaac tctaattgta ttttcactgc
     6901 agtatcttgt attttttatt tgtgatttaa gaaatgtgaa gagaaaatac acagacacaa
     6961 taatggctaa cattgtttct ttcattcctt gttctagagc taaccactct aaaattgttt
     7021 ggtaatgtca cttagtgtaa ttaattgtaa catattcttt taaataaatt gatttattga
     7081 tcaaaca
//
