LOCUS       NM_001369216            1430 bp    mRNA    linear   PRI 08-JUN-2024
DEFINITION  Homo sapiens small integral membrane protein 41 (SMIM41), mRNA.
ACCESSION   NM_001369216 NR_120437
VERSION     NM_001369216.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC025259.49, BC042060.1 and AC078864.20.
            
            On Mar 26, 2019 this sequence version replaced NR_120437.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968540,
                              SAMEA1968968 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000546390.2/ ENSP00000493663.2
            NMD candidate          :: translation inferred from conservation
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-162               AC025259.49        3856-4017           c
            163-1414            BC042060.1         171-1422
            1415-1430           AC078864.20        17661-17676         c
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /map="12q13.13"
     gene            1..1430
                     /gene="SMIM41"
                     /note="small integral membrane protein 41"
                     /db_xref="GeneID:113523638"
                     /db_xref="HGNC:HGNC:54075"
     exon            1..478
                     /gene="SMIM41"
                     /inference="alignment:Splign:2.1.0"
     CDS             77..358
                     /gene="SMIM41"
                     /codon_start=1
                     /product="small integral membrane protein 41"
                     /protein_id="NP_001356145.1"
                     /db_xref="CCDS:CCDS91699.1"
                     /db_xref="GeneID:113523638"
                     /db_xref="HGNC:HGNC:54075"
                     /translation="MNGSQAGAAAQAAWLSSCCNQSASPPEPPEGPRAVQAVVLGVLS
                     LLVLCGVLFLGGGLLLRAQGLTALLTREQRASREPEPGSASGEDGDDDS"
     exon            479..553
                     /gene="SMIM41"
                     /inference="alignment:Splign:2.1.0"
     exon            554..1430
                     /gene="SMIM41"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1118
                     /gene="SMIM41"
                     /note="major polyA site"
     regulatory      1400..1405
                     /regulatory_class="polyA_signal_sequence"
                     /gene="SMIM41"
                     /note="hexamer: ATTAAA"
     polyA_site      1430
                     /gene="SMIM41"
ORIGIN      
        1 gccgccggcc cgcccgccag tctgggctcc tgcacatctg gcgatcccgc cacatctggg
       61 cagccggcgc tggagcatga acggctctca ggcgggcgcc gcggctcagg ccgcctggct
      121 gagctcctgc tgtaaccagt cggcgtcgcc gccggagccc cccgaggggc cgcgcgcggt
      181 gcaggcggtg gtgctcggcg tgctgtccct gctggtgctt tgcggggtcc tgttcctggg
      241 cggcggcctc ctcctccgcg cccagggcct gacagcgctg ctgacccgcg agcagcgcgc
      301 gtcccgcgag cccgagccgg gcagtgccag cggagaggac ggcgacgacg actcctaggc
      361 gcccggctgc gctcggtggt cgcggcctcc aggcagcccc tgactccgag cggtccggag
      421 catgcccgac ggctgctgcg gtcccgaccc cttacccgaa gcggcgcgcc ccacacagag
      481 aggagaagaa gagaagagga gaggagagaa gagaagaaga gaggagagaa gagaagagga
      541 gaggagagaa gagaacctca gaggatccag aacggcagct ggtccttgct ggactgttcc
      601 tgtccatgtg cctggtcatg gtgctgggga acctgctcat catccggcca tgagccctga
      661 ctcccacctc cacacctcca tgtacttctt cctctccaac ctgtccttgc ctgacatcgg
      721 tttcacctcc accacggtcc cccagatgac tgtggacatc cagtctcgca gcagagtcat
      781 ctcctatgca ggctgcctga ctcagaagtc tctctttgcc atttttggag gcacggaaga
      841 gagacatgct cctgagtgtg atggcctatg accggtttgt agccatctgt caccctctat
      901 atcattcagc catcatgaac ctgtgtttct gtggcttcct agttttgctg tctttttttt
      961 ttctcagtct tttagactcc cagctgtaca acttgattgc cttactaatg acctgcttca
     1021 aggaggtgga cattcctaat ttcttctgtg acctttctca actcccccat cttgccgttg
     1081 tgacaccttc atcaataaca taatcatgta tttccctact gccatatttg gttttcttcc
     1141 catctcgggg acccttttct cttactataa aattgtttcc tccattctga gggtttcatc
     1201 atcaggtggg aagtataaag ccttctccac ctgtgggtct cacctgtcag ttgtttgctg
     1261 attttatgga agaggtgttg gagggtacct cagttcagat gtgtcatctt cccccagaaa
     1321 gggtgcagtg gctgcagtga tgtacacggt ggtcacctcc atgctcaacc cctttatcta
     1381 cagcctggga aacagggata ttaaaagtgt cttgcggcgg ccgcacggca
//
