LOCUS       XM_017002152            2968 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens solute carrier family 6 member 9 (SLC6A9),
            transcript variant X4, mRNA.
ACCESSION   XM_017002152
VERSION     XM_017002152.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017002152.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..2968
                     /gene="SLC6A9"
                     /gene_synonym="GCENSG; GLYT1"
                     /note="solute carrier family 6 member 9; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 6 ESTs, 233 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:6536"
                     /db_xref="HGNC:HGNC:11056"
                     /db_xref="MIM:601019"
     CDS             86..1906
                     /gene="SLC6A9"
                     /gene_synonym="GCENSG; GLYT1"
                     /codon_start=1
                     /product="sodium- and chloride-dependent glycine
                     transporter 1 isoform X4"
                     /protein_id="XP_016857641.1"
                     /db_xref="GeneID:6536"
                     /db_xref="HGNC:HGNC:11056"
                     /db_xref="MIM:601019"
                     /translation="MDLWPPLPQNRMVLCPARPPRGTRTSNGATGATRSSAFMFPYFI
                     MLIFCGIPLFFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTYIGIYYNVVICI
                     AFYYFFSSMTHVLPWAYCNNPWNTHDCAGVLDASNLTNGSRPAALPSNLSHLLNHSLQ
                     RTSPSEEYWRLYVLKLSDDIGNFGEVRLPLLGCLGVSWLVVFLCLIRGVKSSGKVVYF
                     TATFPYVVLTILFVRGVTLEGAFDGIMYYLTPQWDKILEAKVWGDAASQIFYSLGCAW
                     GGLITMASYNKFHNNCYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVAD
                     HGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAIVDEVGNEW
                     ILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVAIMYI
                     YGHRNYFQDIQMMLGFPPPLFFQICWRFVSPAIIFFILVFTVIQYQPITYNHYQYPGW
                     AVAIGFLMALSSVLCIPLYAMFRLCRTDGDTLLQRLKNATKPSRDWGPALLEHRTGRY
                     APTIAPSPEDGFEVQPLHPDKAQIPIVGSNGSSRLQDSRI"
ORIGIN      
        1 agtgtcgcgc tggagctggc agaggtgtga atgagcggcg gagacacgcg ggctgcgatc
       61 gctcgcccca ggatggccgc ggctcatgga cctgtggccc cctcttcccc agaacagaat
      121 ggtgctgtgc ccagcgaggc caccaagagg gaccagaacc tcaaacgggg caactggggc
      181 aaccagatcg agcgccttca tgttccccta cttcatcatg ctcatcttct gcgggatccc
      241 cctcttcttc atggagctct ccttcggcca gtttgcaagc caggggtgcc tgggggtctg
      301 gaggatcagc cccatgttca aaggagtggg ctatggtatg atggtggtgt ccacctacat
      361 cggcatctac tacaatgtgg tcatctgcat cgccttctac tacttcttct cgtccatgac
      421 gcacgtgctg ccctgggcct actgcaataa cccctggaac acgcatgact gcgccggtgt
      481 actggacgcc tccaacctca ccaatggctc tcggccagcc gccttgccca gcaacctctc
      541 ccacctgctc aaccacagcc tccagaggac cagccccagc gaggagtact ggaggctgta
      601 cgtgctgaag ctgtcagatg acattgggaa ctttggggag gtgcggctgc ccctccttgg
      661 ctgcctcggt gtctcctggt tggtcgtctt cctctgcctc atccgagggg tcaagtcttc
      721 agggaaagtg gtgtacttca cggccacgtt cccctacgtg gtgctgacca ttctgtttgt
      781 ccgcggagtg accctggagg gagcctttga cggcatcatg tactacctaa ccccgcagtg
      841 ggacaagatc ctggaggcca aggtgtgggg tgatgctgcc tcccagatct tctactcact
      901 gggctgcgcg tggggaggcc tcatcaccat ggcttcctac aacaagttcc acaataactg
      961 ttaccgggac agtgtcatca tcagcatcac caactgtgcc accagcgtct atgctggctt
     1021 cgtcatcttc tccatcctcg gcttcatggc caatcacctg ggcgtggatg tgtcccgtgt
     1081 ggcagaccac ggccctggcc tggccttcgt ggcttacccc gaggccctca cactacttcc
     1141 catctccccg ctgtggtctc tgctcttctt cttcatgctt atcctgctgg ggctgggcac
     1201 tcagttctgc ctcctggaga cgctggtcac agccattgtg gatgaggtgg ggaatgagtg
     1261 gatcctgcag aaaaagacct atgtgacctt gggcgtggct gtggctggct tcctgctggg
     1321 catccccctc accagccagg caggcatcta ttggctgctg ctgatggaca actatgcggc
     1381 cagcttctcc ttggtggtca tctcctgcat catgtgtgtg gccatcatgt acatctacgg
     1441 gcaccggaac tacttccagg acatccagat gatgctggga ttcccaccac ccctcttctt
     1501 tcagatctgc tggcgcttcg tctctcccgc catcatcttc tttattctag ttttcactgt
     1561 gatccagtac cagccgatca cctacaacca ctaccagtac ccaggctggg ccgtggccat
     1621 tggcttcctc atggctctgt cctccgtcct ctgcatcccc ctctacgcca tgttccggct
     1681 ctgccgcaca gacggggaca ccctcctcca gcgtttgaaa aatgccacaa agccaagcag
     1741 agactggggc cctgccctcc tggagcaccg gacagggcgc tacgccccca ccatagcccc
     1801 ctctcctgag gacggcttcg aggtccagcc actgcacccg gacaaggcgc agatccccat
     1861 tgtgggcagt aatggctcca gccgcctcca ggactcccgg atatgagcac agctgccagg
     1921 ggagtggccc cacccccacc ccgtgctccc accgcagaga ctggtgaggc agaggccagg
     1981 tgtctctgcc tgccccctgc cacgccctgg ccaggacggc tgctgtcacc ttggtcacca
     2041 ctgctagtgc agtcattcat gctcatgtcc ccagtgttta catgtccttt ggatgccaag
     2101 atagcagctg gggggagggg tgggagtgga gggttgctgg gaggtccaaa gcactttgga
     2161 ggggtctcgg gccaggtccc cagcagcctg gatggcttta cgtggcctcc gataccctta
     2221 taccctgccc tgagctgagg ttctgggtgg gcctccagcc ccatgactag tgctcctgcc
     2281 ctcagagccg accccagcct ctgccaggca catttggcta ttcctcccta ggggcaggat
     2341 gaagggctgg gggactgccc agtgttactt gtcaggctgt gctgcccagc cctgtttatc
     2401 tgtgtaatta tttttgtaaa cattgtattc tctgtggtcg ccacctcctc gcccccagcc
     2461 tcgggttcag tctgtcttcc aggcctgctt gcacctcact gggctgctcc ggggtctctg
     2521 cccctcattc caggcctggc tgtcaggccc agccagcagg ggcccgtgac ccagcagcct
     2581 gcccaaagca tttgtttctg ggggatgggg tgggggctgc tccacaggag gtttgagccc
     2641 agcaccctgg ggaaggggac cctgcacgac acccccttgc cctccctcca tgaggctaaa
     2701 ggcccagtct tcccaaatgt gctgccctcg ttcatgtgcc aaatggcccc agcccacatg
     2761 cccctcccct ctctggagtg ggagcccctt ctgaagtgtc tgaatccctg aagtgttcat
     2821 ttgtccgtcc tctgtgcagt gacagccccg gccaagccac ctctaatcct ctgtagcaat
     2881 aacggtgcgc cgcccatccc tgcccattgt gcaccactag gattttaaag tccatagatt
     2941 ttaatgaaat ttctattcct gtctctga
//
