LOCUS       XM_011537585            5844 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens solute carrier family 36 member 1
            (SLC36A1), transcript variant X5, mRNA.
ACCESSION   XM_011537585
VERSION     XM_011537585.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000005.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5844
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="5"
     gene            1..5844
                     /gene="SLC36A1"
                     /gene_synonym="Dct1; LYAAT1; PAT1; TRAMD3"
                     /note="solute carrier family 36 member 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 mRNAs, 8 ESTs, 513 long SRA reads, 15 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 6 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:206358"
                     /db_xref="HGNC:HGNC:18761"
                     /db_xref="MIM:606561"
     CDS             289..1719
                     /gene="SLC36A1"
                     /gene_synonym="Dct1; LYAAT1; PAT1; TRAMD3"
                     /codon_start=1
                     /product="proton-coupled amino acid transporter 1 isoform
                     X3"
                     /protein_id="XP_011535887.1"
                     /db_xref="GeneID:206358"
                     /db_xref="HGNC:HGNC:18761"
                     /db_xref="MIM:606561"
                     /translation="MSTQRLRNEDYHDYSSTDVSPEESPSEGLNNLSSPGSYQRFGQS
                     NSTTWFQTLIHLLKGNIGTGLLGLPLAVKNAGIVMGPISLLIIGIVAVHCMGILVKCA
                     HHFCRRLNKSFVDYGDTVMYGLESSPCSWLRNHAHWGRRVVDFFLIVTQLGFCCVYFV
                     FLADNFKQVIEAANGTTNNCHNNETVILTPTMDSRLYMLSFLPFLVLLVFIRNLRALS
                     IFSLLANITMLVSLVMIYQFIVQRIPDPSHLPLVAPWKTYPLFFGTAIFSFEGIGMVL
                     PLENKMKDPRKFPLILYLGMVIVTILYISLGCLGYLQFGANIQGSITLNLPNCWLYQS
                     VKLLYSIGIFFTYALQFYVPAEIIIPFFVSRAPEHCELVVDLFVRTVLVCLTCILAIL
                     IPRLDLVISLVGSVSSSALALIIPPLLEVTTFYSEGMSPLTIFKDALISILGFVGFVV
                     GTYEALYELIQPSNAPIFINSTCAFI"
ORIGIN      
        1 agagctcttc atccgcctgg gcccaaccct ggaactattc ctttcaatgg tgtcttttct
       61 tgccttgttt cagaaggatc tactagttgg ccctatcttg tgccaagact gacagcaagg
      121 aagctgctgg ctgaaattcc atcgacagag aggagaaaat acatctgggg aatttgccgc
      181 tgctctgagt tccaaagtcc aaaccaatgt aattgtttca gaataacgga tgacactttt
      241 agcttgcaaa caaggggcgc caatgcgtga attctggtag gagctgccat gtccacgcag
      301 agacttcgga atgaagacta ccacgactac agctccacgg acgtgagccc tgaggagagc
      361 ccgtcggaag gcctcaacaa cctctcctcc ccgggctcct accagcgctt tggtcaaagc
      421 aatagcacaa catggttcca gaccttgatc cacctgttaa aaggcaacat tggcacagga
      481 ctcctgggac tccctctggc ggtgaaaaat gcaggcatcg tgatgggtcc catcagcctg
      541 ctgatcatag gcatcgtggc cgtgcactgc atgggtatcc tggtgaaatg tgctcaccac
      601 ttctgccgca ggctgaataa atcctttgtg gattatggtg atactgtgat gtatggacta
      661 gaatccagcc cctgctcctg gctccggaac cacgcacact ggggaagacg tgttgtggac
      721 ttcttcctga ttgtcaccca gctgggattc tgctgtgtct attttgtgtt tctggctgac
      781 aactttaaac aggtgataga agcggccaat gggaccacca ataactgcca caacaatgag
      841 acggtgattc tgacgcctac catggactcg cgactctaca tgctctcctt cctgcccttc
      901 ctggtgctgc tggttttcat caggaacctc cgagccctgt ccatcttctc cctgttggcc
      961 aacatcacca tgctggtcag cttggtcatg atctaccagt tcattgttca gaggatccca
     1021 gaccccagcc acctcccctt ggtggcccct tggaagacct accctctctt ctttggcaca
     1081 gcgatttttt catttgaagg cattggaatg gttctgcccc tggaaaacaa aatgaaggat
     1141 cctcggaagt tcccactcat cctgtacctg ggcatggtca tcgtcaccat cctctacatc
     1201 agcctggggt gtctggggta cctgcaattt ggagctaata tccaaggcag cataaccctc
     1261 aacctgccca actgctggtt gtaccagtca gttaagctgc tgtactccat cgggatcttt
     1321 ttcacctacg cactccagtt ctacgtcccg gctgagatca tcatcccctt ctttgtgtcc
     1381 cgagcgcccg agcactgtga gttagtggtg gacctgtttg tgcgcacagt gctggtctgc
     1441 ctgacatgca tcttggccat cctcatcccc cgcctggacc tggtcatctc cctggtgggc
     1501 tccgtgagca gcagcgccct ggccctcatc atcccaccgc tcctggaggt caccaccttc
     1561 tactcagagg gcatgagccc cctcaccatc tttaaggacg ccctgatcag catcctgggc
     1621 ttcgtgggct ttgtggtggg gacctatgag gctctctatg agctgatcca gccaagcaat
     1681 gctcccatct tcatcaattc cacctgtgcc ttcatatagg gatctgggtt cgtctctgca
     1741 gctgcctacc cctgccccat gtgtcccccg ttacctgtcc tcagagcctc aggtatggtc
     1801 caggctctga ggaaagtcag ggttgctgtg tgggaacccc tctgcctggc acctggatac
     1861 cctgggccag gtaacctgag ggcaggggag aggtggggtg gcagacacgc agaagtgcta
     1921 ctagtgacag ggctgccatc gctcacctgt acctatttac acccagaact ttccagctcc
     1981 ccctcatcat gcctcctcct tcctacctgc ctcccctctg ctggtgcacc tcgcccaact
     2041 cattcttact gcacagttca ctttatttaa caattttcat gtcccccacc tcatgttttc
     2101 accttttctg ggccaggcat agattaagta actgggaacg ccccctcttt ataaagctgg
     2161 gcttctttct catctctctc ccaaatgttg tatctcagta ttcttcctat tcgagtctcc
     2221 agggggtggc tggacctacc tggtcatttg aaacaggccc ccaagctgga gtttttaatc
     2281 tggactctct ggcttgctgt gacccctaag gcaatgcttc tcttccctgg attccttagt
     2341 gtgggtcaca gtactgtgtt cttagttgct ttagctctta aaacatacga agtgttgcct
     2401 aaactgaaaa tatttatctt ttatttaaaa tcagattttt gtttttagac tgtcttagat
     2461 ctggggctat tacgaatcac ttcttcttca gtaaactttg actcaacttc tcctgctgaa
     2521 aagaagctcg ctccagatgt ctgcatgggt cctcggcact cttggctgag gactcaaagg
     2581 ttttaatcag gatcgtctaa aaatgtacct cggtgaggag gcacagattt tgcctcctgt
     2641 tgaccagcct ggtttcatac cgaaaagaca ttgaaggact gcagaaatgt atgggtgcac
     2701 cgggccgagg gaagggtggc tgagtgagag gcgtataaaa tggggctgtg tgcatgcagg
     2761 cccatgtttc agcctcagcc cacgccaggt gaaaggatca gcaatgctct gttgccatcg
     2821 tgctgggacg acaccagctc tattgccacc gatgagtagc tgaggtcagt gtgcacagag
     2881 tttgaaatta agttaataga ctttacagca gctggtctga cactacgcgc agtgctcggt
     2941 tgtttacaat cagtggggaa aagggcagaa ccagtgcccg gccccacact gcctctgtgg
     3001 cctggacttt gaaaggaacc cactgaacac taattatgag ccctgtcttt cccccagaat
     3061 gcctccctgg gtttcacaaa cagccttgag gttggccctc ctcaaggtca gccttcagat
     3121 ttgggagcaa acttcagaga aggcagagga agatacattg ccttgctgtg ggctgcctct
     3181 tctttcctct tggtgtgcga agtatttcag aaggccattg atgaattccc cctctttagc
     3241 tgtgtatttg tgcacgtgtg tgtgtacgtg cgtgtgtgtg tgtgttcctg tgtaagtaac
     3301 agaccagact ccttttctct tctgtcccgt caccaggctc ttgcttcact gcagatacag
     3361 ttcactctga aagctggttg aaggagagca gcaaaaatgt atcaggggtt ttgcttctgt
     3421 gtttcgccaa agctcataag ggctgtgacc cacccatatg gccccagttt tttctgtctc
     3481 ttctgttcca aagccaggag agctgacttc caggtgaagg gatgggaaaa gtggactctc
     3541 attgtagtga ctcccaacct acctaataat ttgttaactt aggaatatgc tatcattgtt
     3601 gacttgttct tccttaggag aaggacgatt ttcacccacc ctttctgttc tatggtggac
     3661 tcttaacagg tgctatgtga ccaggaatct agccgggagt agcagaggcc ctgtcttctg
     3721 aagtctcagg cttagaagtt accaaagtgg gctcagaaac tgtcatctcc tggttccaag
     3781 ttcgggctct ggcagcccag ccgctatctt agctgtcttt cccagcggtg ctaagagtgg
     3841 tctcagtgag aaggtagatg ccaactggag ggccagacct gtgtcctgcc catgtcctcc
     3901 ttggtggacg tttctgttta ctcagagctg ctagagacca tcctgcccat ccgagttctg
     3961 agattgggac tgtgatgttg ggacctgagg actggatggt agaatactgg ggtcccccag
     4021 ctcttagcag gatgcaggct attgcttcca cacccctggc cgtgagaacg tggtatgtag
     4081 gagagttggc tgtagcttta ggatttctgg aagccaattt ggcatggcct atttgatctc
     4141 tggcttgtgc tcctgctaca ctgacagact gattgcgtgg ctctttcaga agacccagga
     4201 agggcagctc cagccagagg accttcctgg ctatgcaggt gcacagctct taggcatcaa
     4261 gcaaagggtc agccagtcag tagtagtggg aggaagccct tcctcctctt atgcaagcag
     4321 ctcgcagcca gcccagaatc tcttatgcag cccaaagggc ttcttgaggt agagagccct
     4381 ccccagtgtc ttcccaggat aagtagaaat atgatcacag agcaacggag caaaggcttt
     4441 cgggagtgtg aggctgcatc tgctggagca aagggaaacc gtgggctttt ccggccagat
     4501 actcttgagc tctgtgaccc tgctcctgtc accccaattt ctccaagcca gaggtagctt
     4561 tctcagagcc ccttggtggt tctgtcctcc aaatgctgct gttgggagcg ggcttccagc
     4621 tctcagtggg cagtgcacct cctcctaaat gcaggcactt gctaggaaga gtgtgagctg
     4681 gcgtcttctg ttcaccctgc ctagcagttg tcaccattca caagtggcat tatttatgtt
     4741 gtgctgctgt ccagctgcta agatcccttc atctgcacaa gccctggcta gatatgtgtg
     4801 aatgtgtggc atcatttcac ttcagccgcc caattccatc tctcctctgc agccagattc
     4861 actggctgat gctcactgct cactgtctat ccccacgaaa tttagtttta tcagtagtct
     4921 taaagtgttg atctcaaaca agtacattag aaaaatcatg tttcttctct ctcatcttac
     4981 tttttcttct cagatttctc ccttcctaga acattctctc tgtttagcac taatgttcac
     5041 ctcgtatttt ttggaagtgc aaaaatctca atttgtgtct gtttacagct ctctctcctc
     5101 actgctcaca gcaaggggtt ctgtatcagt ggatttcatt ttgtagctgc tgagatgtta
     5161 aggcaagcct cagcatctgc ccctgctggg tgcacaatgc tgcttcctcg aagagaagac
     5221 acagagtcca agtggcagga cttgaggttg gcttccactc tgccttagaa gttaattttc
     5281 caaagtacat tacaaatctc tgaggccatt aggggaaaag gaaggggtgt ggtttgtctt
     5341 tgaaattacg gttaatactt ttagacagta agtccggctg gttgcagggc tatttgcccc
     5401 gacagcatca gcctgtaaca tttcttctct ttcctttgtg ccactgagtc gttccctggc
     5461 cagaggacat aaatggtgct ggtaggaggt tatcagagta aggaaggtag cagatatagg
     5521 tgcagggtgc ctgtcattca ctgtgttatt tggtttaaat caaagtgatt ctgggggaag
     5581 ctatgctctt tcagtggata ataaaattgg taactctatt gtaaaacatg tcaatggtgt
     5641 gtgaagaaaa atcaaccaat ctgtaggtgt tgataactag acagtactgt gtatgttacg
     5701 tgcctgtgtg gatgtgcact tccagcatgg tatgtgtagc gatgtggatc atgccagagt
     5761 tcgtagatcc tgttttgggg tttgcacatg gatcgtatgt taagcttttt cttttcaata
     5821 aatgaatttt atttttattt ttga
//
