LOCUS       XM_011535722            2824 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens SNF2 histone linker PHD RING helicase
            (SHPRH), transcript variant X14, mRNA.
ACCESSION   XM_011535722
VERSION     XM_011535722.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000006.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011535722.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
     gene            1..2824
                     /gene="SHPRH"
                     /gene_synonym="bA545I5.2; RAD5"
                     /note="SNF2 histone linker PHD RING helicase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, 1000 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 58 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:257218"
                     /db_xref="HGNC:HGNC:19336"
                     /db_xref="MIM:608048"
     CDS             235..2802
                     /gene="SHPRH"
                     /gene_synonym="bA545I5.2; RAD5"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase SHPRH isoform X9"
                     /protein_id="XP_011534024.1"
                     /db_xref="GeneID:257218"
                     /db_xref="HGNC:HGNC:19336"
                     /db_xref="MIM:608048"
                     /translation="MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPC
                     PGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVGIFSPLSVKLNIV
                     ISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDV
                     EKQKKEPMSICDKGILVESSFSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLE
                     AGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPDVLEEDEDDPESEPEGQDIDEL
                     YHFVKQTHQQETQSIQVDVQHPALIPVLRPYQREAVNWMLQQECFRSSPATESALHFL
                     WREIVTSEGLKLYYNPYTGCIIREYPNSGPQLLGGILADEMGLGKTVEVLALILTHTR
                     QDVKQDALTLPEGKVVNYFIPSHYFGGKLKKTEIQNIEFEPKEKVQCPPTRVMILTAV
                     KEMNGKKGVSILSIYKYVSSIYRYDVQRNRSLLKRMLKCLIFEGLVKQIKGHGFSGTF
                     TLGKNYKEEDICDKTKKQAVGSPRKIQKETRKSGNKDTDSEYLPSDTSDDDDDPYYYY
                     YKSRRNRSKLRKKLVPSTKKGKSQPFINPDSQGHCPATSDSGITDVAMSKSTCISEFN
                     QEHETEDCAESLNHADSDVPPSNTMSPFNTSDYRFECICGELDQIDRKPRVQCLKCHL
                     WQHAKCVNYDEKNLKIKPFYCPHCLVAMEPVSTRATLIISPSSICHQWVDEINRHVRS
                     SSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELNYVDIPHSNSEDGRRLRNQ
                     KRYMAIPSPLVAVEWWRICLDEAQMVECPTVKGTAWQPPTNENHCTGRWSIEYDIQH"
ORIGIN      
        1 acgctacagc gcgcgcccgg cagctaggcg ctgtggtttc tgggtctccc gggggacccc
       61 tacacgttcc ggcaaaaagc gctcgtgccc acctcaagcc catgttcggt gggtggcgaa
      121 tgcgtgcccg tgatctgctg ggtctgtaga ggagcgcagg cctggtgcaa acagactcaa
      181 gaggctcgga gaaccagctt ggagttcaca gttaccagcc aagaaaactt gaaaatgagc
      241 agccgacgga aacgtgctcc tccagtgagg gtagatgagg aaaagaggca gcagcttcat
      301 tggaatatgc atgaggacag aaggaatgaa cctatcatca taagtgatga tgacgagcag
      361 ccctgcccag gttcagatac ctcttctgct cattatatca ttctaagtga tagtctaaag
      421 gaagaagtgg ctcacagaga taagaagagg tgttcaaaag tggtgagctt ctcaaaacca
      481 attgaaaaag aagagactgt tggtattttt tcccctttgt ctgtaaagtt aaatattgtg
      541 atttctccct atcattttga taattcctgg aaagcatttc taggagaatt aactcttcag
      601 cttcttcctg cacagagttt aattgaaaat ttttccgaaa ggagtattac attgatgagt
      661 tcagagtcaa gcaatcagtt cctgatttat gttcattcaa aaggtgaaga tgtagagaaa
      721 caaaaaaaag aaccgatgag tatttgtgac aagggtattc tggtggagtc atccttcagt
      781 ggtgaaatgt tagaagattt ggggtggcta caaaagaaga gaagaataaa actctatcag
      841 aaaccagaag gaaatcacat tatcaaggtt ggaatttatc ttttggaagc tggcctagca
      901 aaactagact tcttgagtga tgcaaattca agaatgaaaa agttcaatca gctcatgaag
      961 aaagtaatgg aaaagttaca caattctatt attccagatg tgttggaaga ggatgaagat
     1021 gatccggaga gtgagccaga gggacaagac attgacgagc tgtatcactt tgtgaaacaa
     1081 acacatcagc aagaaacgca gtccatccaa gtggatgtcc agcatcctgc attgatccct
     1141 gtgttgagac cctaccaaag agaggctgtc aattggatgc tacaacaaga gtgtttcaga
     1201 agcagtcctg ctactgaaag tgccctgcac ttcttatggc gagagattgt tacatctgag
     1261 ggtctgaaac tctactataa tccatataca ggctgcatca ttcgtgagta cccaaattct
     1321 gggccgcagt tgcttggtgg aattttagca gatgagatgg gtcttggaaa gacagtggag
     1381 gttttggctc tgattctgac acatactcga caagatgtca agcaagatgc tctcactctt
     1441 cccgagggaa aagtggtgaa ttattttatt ccgtcacatt attttggagg aaaactgaaa
     1501 aagacagaaa tccagaatat cgaatttgaa ccaaaagaaa aagttcaatg ccctcctaca
     1561 cgtgtgatga tactgacagc tgtgaaagaa atgaatggaa aaaaaggagt gtccatcctt
     1621 tccatctata agtatgtcag ttctatatat agatacgatg ttcaacggaa caggagtctt
     1681 ttgaaacgga tgctgaaatg tttaattttt gaaggtctcg tgaaacagat caaaggccat
     1741 ggtttttctg ggacttttac attgggaaag aattacaagg aagaggatat atgtgataaa
     1801 acaaaaaagc aggcagtagg gagtccaagg aaaattcaga aagaaactag aaaatcaggg
     1861 aacaaggaca cagattctga atacttgcca tcagacacct ctgatgatga tgatgatcct
     1921 tactattatt attataagtc caggagaaat cgcagtaaat tgaggaaaaa gcttgttcca
     1981 tccacaaaaa aaggaaaaag tcaaccattt atcaatcccg attcacaagg tcactgtcca
     2041 gctactagcg actctggaat aactgatgtt gctatgtcta aaagtacatg tatctctgaa
     2101 ttcaaccaag aacatgaaac agaggactgt gctgaatctc taaatcatgc tgatagtgat
     2161 gtaccacctt ctaataccat gagtcccttt aacacctctg attaccgctt tgagtgtata
     2221 tgtggtgaac ttgatcagat agatcgtaag cctcgtgttc aatgcctgaa gtgtcacctg
     2281 tggcaacatg caaagtgtgt gaattatgat gagaaaaatc tgaagatcaa gcctttttac
     2341 tgcccccact gccttgttgc aatggaacca gtgtcaacaa gagcaactct gatcatctct
     2401 ccaagttcca tctgtcacca gtgggtggat gagatcaaca ggcatgtgag gtcgtcatct
     2461 cttcgagtct tggtatatca aggagtgaag aaagatggct ttttacaacc tcattttttg
     2521 gcagaacagg atatagttat cattacctat gatgtactgc gttcagaatt aaattatgtc
     2581 gatatcccac atagcaatag tgaggatggg cgtcgcctac ggaaccagaa gcgctatatg
     2641 gctatcccga gccccctggt agctgtggag tggtggagga tctgccttga tgaagctcag
     2701 atggttgagt gtcccacagt aaaagggact gcgtggcagc ctcccactaa tgagaaccac
     2761 tgtactggaa gatggtccat tgaatatgac attcaacatt gagtgtgata actgttaaat
     2821 aaaa
//
