LOCUS       XM_047442040            4481 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens SH3 domain containing kinase binding
            protein 1 (SH3KBP1), transcript variant X4, mRNA.
ACCESSION   XM_047442040
VERSION     XM_047442040.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000023.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4481
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
     gene            1..4481
                     /gene="SH3KBP1"
                     /gene_synonym="AGMX2; CD2BP3; CIN85; GIG10; HSB-1; HSB1;
                     IMD61; MIG18"
                     /note="SH3 domain containing kinase binding protein 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 mRNAs, 40 ESTs, 1320 long SRA reads, 6
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:30011"
                     /db_xref="HGNC:HGNC:13867"
                     /db_xref="MIM:300374"
     CDS             89..2041
                     /gene="SH3KBP1"
                     /gene_synonym="AGMX2; CD2BP3; CIN85; GIG10; HSB-1; HSB1;
                     IMD61; MIG18"
                     /codon_start=1
                     /product="SH3 domain-containing kinase-binding protein 1
                     isoform X4"
                     /protein_id="XP_047297996.1"
                     /db_xref="GeneID:30011"
                     /db_xref="HGNC:HGNC:13867"
                     /db_xref="MIM:300374"
                     /translation="MKKDPLTNKAPEKPLHEVPSGNSLLSSETILRTNKRGERRRRRC
                     QVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSGESDE
                     LGISQDEQLSKSRPEGLPPASLLPFPAHGAKGKTTFEGTILYRAAPGKTEGHRRYYSL
                     RETTGSESDGGDSSSTKSEGANGTVATAAIQPKKVKGVGFGDIFKDKPIKLRPRSIEV
                     ENDFLPVEKTIGKKLPATTATPDSSKTEMDSRTKSKDYCKVIFPYEAQNDDELTIKEG
                     DIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPPDFEKEGNRPKKPPPPSAPVIK
                     QGAGTTERKHEIKKIPPERPEMLPNRTEEKERPEREPKLDLQKPSVPAIPPKKPRPPK
                     TNSLSRPGALPPRRPERPVGPLTHTRGDSPKIDLAGSSLSGILDKDLSDRSNDIDLEG
                     FDSVVSSTEKLSHPTTSRPKATGRRPPSQSLTSSSLSSPDIFDSPSPEEDKEEHISLA
                     HRGVDASKKTSKTVTISQVSDNKASLPPKPGTMAAGGGGPAPLSSAAPSPLSSSLGTA
                     GHRANSPSLFGTEGKPKMEPAASSQAAVEELRTQVRELRSIIETMKDQQKREIKQLLS
                     ELDEEKKIRLRLQMEVNDIKKALQSK"
ORIGIN      
        1 ggaggaccat gggaaagaga gaggaggagc ctgggaagga gaagggactg cagcatcagc
       61 tccagttttg agggaaataa agaaagagat gaagaaagac cctctcacca acaaagctcc
      121 agaaaagccc ctgcacgaag tgcccagtgg aaactctttg ctgtcttctg aaacgatttt
      181 aagaaccaat aagagaggcg agcgacggag gcgccggtgc caggtggcat tcagctacct
      241 gccccagaat gacgatgaac ttgagctgaa agttggcgac atcatagagg tggtaggaga
      301 ggtagaggaa ggatggtggg aaggtgttct caacgggaag actggaatgt ttccttccaa
      361 cttcatcaag gagctgtcag gggagtcgga tgagcttggc atttcccagg atgagcagct
      421 atccaagtca aggcctgaag gtctccctcc agcttctctg ctgccctttc cagctcacgg
      481 agcaaaagga aagactacct ttgaagggac aattctgtac cgagctgcac cgggaaagac
      541 ggagggccac agacgctatt acagtttaag ggaaaccaca ggctccgaga gtgatggggg
      601 tgactcaagc agcaccaagt ctgaaggtgc caacgggaca gtggcaactg cagcaatcca
      661 gcccaagaaa gttaagggag tgggctttgg agacattttc aaagacaagc caatcaaact
      721 aagaccaagg tcaattgaag tagaaaatga ctttctgccg gtagaaaaga ctattgggaa
      781 gaagttacct gcaactacag caactccaga ctcatcaaaa acagaaatgg acagcaggac
      841 aaagagcaag gattactgca aagtaatatt tccatatgag gcacagaatg atgatgaatt
      901 gacaatcaaa gaaggagata tagtcactct catcaataag gactgcatcg acgtaggctg
      961 gtgggaagga gagctgaacg gcagacgagg cgtgttcccc gataacttcg tgaagttact
     1021 tccaccggac tttgaaaagg aagggaatag acccaagaag ccaccgcctc catccgctcc
     1081 tgtcatcaaa caaggggcag gcaccactga gagaaaacat gaaattaaaa agatacctcc
     1141 tgaaagacca gaaatgcttc caaacagaac agaagaaaaa gaaagaccag agagagagcc
     1201 aaaactggat ttacagaagc cctccgttcc tgccataccg ccaaaaaagc ctcggccacc
     1261 taagaccaat tctctcagca gacctggcgc actgcccccg agaaggccgg agagaccggt
     1321 gggtccgctg acacacacca ggggtgacag tccaaagatt gacttggccg gcagttcgct
     1381 atctggcatc ctggacaaag atctctcgga ccgcagcaat gacattgact tagaaggttt
     1441 tgactccgtg gtatcatcta ctgagaaact cagtcatccg accacaagca gaccaaaagc
     1501 tacagggagg cggcctccgt cccagtccct cacatcttca tccctttcaa gccctgatat
     1561 cttcgactcc ccaagtcccg aagaggataa ggaggaacac atttcacttg cgcacagagg
     1621 agtggacgcg tcaaagaaaa cttccaagac tgttaccata tcccaagtgt ctgacaacaa
     1681 agcatccctg ccgcccaagc cggggaccat ggcagcaggt ggcggtgggc cagcccctct
     1741 gtcctcagcg gcgccctccc ccctgtcatc ctctttggga acagctggac acagagccaa
     1801 ctccccgtct ctgttcggca cggaaggaaa accaaagatg gagcctgcgg ccagcagcca
     1861 ggcggccgtg gaggagctaa ggacacaggt ccgcgagctg aggagcatca tcgagaccat
     1921 gaaggaccag cagaaacgag agattaaaca gttattgtct gagttggatg aagagaagaa
     1981 aatccggctt cggttgcaga tggaagtgaa cgacataaag aaagctctac aatcaaaatg
     2041 aatacttgat caatgaaatg tcacattatt catcctgagt ccgagactca aattttctgc
     2101 cccagccaaa ataatcttgt gccaaaagat taaaggtttg cctcaaaatg tccctgtttg
     2161 aaagattagc acaaaagtct tgatagcaca acacaaattc catccaagag gagaatcttc
     2221 cccagggttt agtcctgggg ctggcactcg ttgtgactta cacagagcaa aattgtgcta
     2281 aaggcttttc tactctgaga tctcaatgcg aaatgaaaac tcaggcagtt tagtccatag
     2341 tggtactatt ttgatgatat tttccattaa taaaatgtaa tttcagatta ttcgtttaca
     2401 agctttataa ttttatgatt ttttaatcgt gttttgtcac agacttccct agtgtttgta
     2461 ctacacgtag tcagaagcga gtgtcctttt cttttgcttc aggctaagag ctgcctcgct
     2521 ctttgtcccc ccattaggat tctattacat atgcaattgt aggttcaacc tgtccctttc
     2581 cctgccagca aaccccacca ccctaagaga aattttagct tatatatgac ggtatattta
     2641 caaaaagaga aagagaaaat ctggtatttg caatgatctg tgccttcttt ttaccaccct
     2701 cttgattgga gcttttgtga tgcagctacc atgattcaaa aaaattaaaa attaaaaaaa
     2761 aaaaatctgc cacttatcca agtccactag aggccactgt cttcaaagct tctctcaccc
     2821 tagccaaagg tcctaagagg agacagctgt gaagttgggc gtgctctgtg gtaccagctg
     2881 tgacttttct atttctccta gttttaggtt gttcatgaaa ctagaaatgt catcctgctt
     2941 gatttttcat cagccaagtt aaacccctgc tttctgtcct ttgcaccttt tgcgtgaaca
     3001 gaatatgcat tattaaagca aaaataaata aaagtaaaat gcaaatgaaa acaagggagg
     3061 gaaagttgta ttatttcctg cactgggtta cccgtgtgtg ttatcgttta aactgtattc
     3121 acataatgtc atttgccttg ctcacttgta accccttcct caggtccaag agaatgggag
     3181 gagggtcatg ttgaagtgta gccactggaa ctttcttgca tttatggagt tgctttttct
     3241 ttcccaagga aactgatgtt tgcctgtccg ctttatcttt gtagtacatg aacagttcag
     3301 ccttagacta tgtaactgtt ttctcatcct tagctgaaaa tgaggggcct actgtattgc
     3361 gagactgttc aggggtaggg gtggaggggg tggtccctta atggcccctg aagatgttgg
     3421 atgtgtttct caaaagctgc tttgtctctt tcctgagttt aatagtgaaa ctactaaaca
     3481 ttaatagatt tgcacagcca caaagaatga gagttgataa taccgaagaa gtgatgcaaa
     3541 aacaaaaaat cacattactg atcattgata gtattacaaa taaatgtctc ttcctttctc
     3601 ttcctccctt cctccccctg ccttcctctt aacctatgtg ctcatccttg ctacttgagg
     3661 ctgttatttc cctccgagta tttaaggagc ccaaacacct tggtcttcct gggtgggggc
     3721 ataattaagg gaagggagtg tataaggaag gaaacctcat accctccatt cccatccctg
     3781 gatatattgc cttttcagca gcctcgggtt cagtgtgctt ggggtcagga gtgccaggtt
     3841 cccaagagca gcgtaaaaca tccctgtacc ccttgacagt tataagcatt tctgcgttaa
     3901 acttgaagat tccagagatt ccccacgacc taatgatcta agaatgcaga ttggattctt
     3961 tgatgttcaa atttctcatt tacttatgaa aatccctaat tatatagttt tatataatgt
     4021 gtatacagag taggattgtt gatgaaattg agcggttgga acaccctcat ggaacactgg
     4081 caacatggaa tgtagagagc tgatgtcttc cccctcatag aggccattgg cttcctttgt
     4141 ataaggagag ggagaagtga ttctggaagg agaagttggt atgtctagct tcattgcggc
     4201 ccctcgggct acccagcaag aggattctgc atcaaggaac tggacgagcc gctacccaaa
     4261 ctgccaccat ctttactctt tacaaaatgg acccatcgag aatgttgaaa agcttggaag
     4321 tatcactttt gaaaaaaaaa aaaattattt tgcattcagc atggactcga ccaggcatct
     4381 atggagatta tttttttgct tcattttata aagttgtatt tagaaaagtc ttaagtattg
     4441 tgctttgtaa agaagatgat taaaatgaaa ttttgtgaga a
//
