LOCUS       XM_047416075            4046 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens sarcoglycan beta (SGCB), transcript variant
            X2, mRNA.
ACCESSION   XM_047416075
VERSION     XM_047416075.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000004.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4046
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="4"
     gene            1..4046
                     /gene="SGCB"
                     /gene_synonym="A3b; LGMD2E; LGMDR4; SGC"
                     /note="sarcoglycan beta; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 29 ESTs, 1031 long SRA reads, and 96% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 64 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:6443"
                     /db_xref="HGNC:HGNC:10806"
                     /db_xref="MIM:600900"
     CDS             136..795
                     /gene="SGCB"
                     /gene_synonym="A3b; LGMD2E; LGMDR4; SGC"
                     /codon_start=1
                     /product="beta-sarcoglycan isoform X2"
                     /protein_id="XP_047272031.1"
                     /db_xref="GeneID:6443"
                     /db_xref="HGNC:HGNC:10806"
                     /db_xref="MIM:600900"
                     /translation="MEFHESGLLRFKQVSDMGVIHPLYKSTVGGRRNENLVITGNNQP
                     IVFQQGTTKLSVENNKTSITSDIGMQFFDPRTQNILFSTDYETHEFHLPSGVKSLNVQ
                     KASTERITSNATSDLNIKVDGRAIVRGNEGVFIMGKTIEFHMGGNMELKAENSIILNG
                     SVMVSTTRLPSSSSGDQLGSGDWVRYKLCMCADGTLFKVQVTSQNMGCQISDNPCGNT
                     H"
ORIGIN      
        1 agccttctct gggattcctg atgcatatag aaaaaagatc tgaagatact gtcatttggc
       61 aagtcccggt gaaaaagcca tataacactt gttatttggg ccgtgattcg cattggacca
      121 aatggctgtg atagtatgga gtttcatgaa agtggcctgc ttcgatttaa gcaagtatct
      181 gacatgggag tgatccaccc tctttataaa agcacagtag gaggaaggcg aaatgaaaat
      241 ttggtcatca ctggcaacaa ccagcctatt gtttttcagc aagggacaac aaagctcagt
      301 gtagaaaaca acaaaacttc tattacaagt gacatcggca tgcagttttt tgacccgagg
      361 actcaaaata tcttattcag cacagactat gaaactcatg agtttcattt gccaagtgga
      421 gtgaaaagtt tgaatgttca aaaggcatct actgaaagga ttaccagcaa tgctaccagt
      481 gatttaaata taaaagttga tgggcgtgct attgtgcgtg gaaatgaagg tgtattcatt
      541 atgggcaaaa ccattgaatt tcacatgggt ggtaatatgg agttaaaggc ggaaaacagt
      601 atcatcctaa atggatctgt gatggtcagc accacccgcc tacccagttc ctccagtgga
      661 gaccagttgg gtagtggtga ctgggtacgc tacaagctct gcatgtgtgc tgatgggacg
      721 ctcttcaagg tgcaagtaac cagccagaac atgggctgcc aaatctcaga caacccctgt
      781 ggaaacactc attaaaagaa ccccagaggt caccaacatg tttatatctt gacttgactt
      841 ttttatgcat gcaaatcatt gtttttacag agtttgtgat aactcataat tattttaatg
      901 gcagagcact gctgtatctg ttttatggtc tacatagtta aaatcttctc agagagccta
      961 aattctaata cattttatta atttatacta atcttcatat ttactgttct ctaaaataat
     1021 tatgagaagc aaataaaatc aaaagtcatg tttaaagacg tgtttttaaa attccactat
     1081 cccttttcta aaggttaaag gtctgaagca gctgtttaga ttcactgtaa gtaaactttg
     1141 gtaactctaa tggggataga cccacttaag atatttaaaa aggtatggca tcagcgtttc
     1201 atgctctgcc ttttagcttc taaaaggaaa gatgcagatt tctagtgcat taagcctgag
     1261 ccatattctc acatgcaagt gaagtcatta aagaacttta catatgtgag atagaaacaa
     1321 tggttcctta gttttgcact gggaagaaaa tattttgtaa aagaatgttt atttgaaata
     1381 atgataacta tcaattgttc acaatgtggt ggaaattaaa acaccatctc agctttaact
     1441 tttaaataat aatgataact atctttattg agcatcttct acatcctagg cattgtccta
     1501 ggcattgcat gtttatatcc ccaattctca ccacaaccct gcaagtaggt ggtattatcc
     1561 aagttttacc cattaagaaa ctgaagatca gagaagttaa gaaacttgct caacatcata
     1621 tagtaagtag cagagttggg attggaattc aggcatgact caaacctgga tgtacttgat
     1681 tccaaatgcc atgttgtttt cactctctgc actgactttt taattattta aaactctaga
     1741 aagatgaaca aaggttaatt taaacttacc taagaagatg agaatcaaac aaaacagata
     1801 tgcttactct agttaaaaag aaaataaatc tcatgtcaga cccagaaagg accaatcact
     1861 gtccgattgt aagctatgtt gggccaattc caaaatatta tacgatggag aggtcaaatt
     1921 tacctacttc tgagttacct cagtttccca acaatggacc ttggcacact ggagtaacaa
     1981 tacataacag agttgccaag atatttatac cctcagcact cggggcaaca cagtggaaag
     2041 tggggaggcc atagacccaa acaagttctt tgggccaggc atggcctagt aagtacacca
     2101 tgcctcgaaa ataagtccag aagcactgga ctaaagagtg ctaatgcagg aaataataca
     2161 cataattttt aggtaaggat aataatttat ctctgctcct aatattacta tcccattgta
     2221 attatttata accctcaagc cagttgattt ttaatatatt tgattggaaa agaactctct
     2281 ggtattatta agactcacac agaatcaggg acagggcccc caaaggagtt tgctgtaaaa
     2341 taggcagtag agttgtggca tgggcccaac cctgcattca agtgtaacag cattctgtca
     2401 gggtcacttt gaattgtgca cataagaaaa ccaatacaaa aaacaatttg tattcaatat
     2461 tgtcacattt ctctctggta gaaaaatcaa ataccttaga gattatgaag tcattaattt
     2521 atactgaaat tggattgact tactacctaa cactgagcgc tgtttttaaa tgaaaagaat
     2581 gagatttata accacttgag tgttattgca gtgatatttg aactcatttg aatatattca
     2641 gtatcattta atgtctgaat tcagaaaaaa atgccgaaat ttttattcag atggtccata
     2701 aattaaattg catattcatt acttatctgc tctatttaga tttattttaa aagtttattt
     2761 aagtaaatat ttttataaaa accagaaaac actgtattac aaaatattat ttattaaatg
     2821 tagttcagga aataatctat ttttactctt ttttgggaaa tacttgtgtt tttgatacat
     2881 ctccatgaag ttcttttgag aggagaggct attttgatgt ttttatacaa ctgaaggtta
     2941 acagccatag cattttatga tactttacag gtagtcctgg ctttttccct gaaacataag
     3001 cttggaaaat ctattagaaa gcagaacagg gcaaactctc cattttactt atggcttttc
     3061 taatttttaa ttaattaatt tatttttttg agacagagtc ttgttctgtc gccaggctgg
     3121 agtgcagtgg cacaatctcg gctctcggct cactgcaacc tctgcctccc aggttcaagc
     3181 gattctcctg cctcagcctc ccgagtacct gggactacag gcatgtgcca cagttcccgg
     3241 ctaatttttg tatttttagt agagacgggg tttcaccatg ttggccagga tggtctcaat
     3301 ctcttgacct cgtgatctgc ctgccttggc ctcccaaagt gctgggatta caggtgtgag
     3361 ccaccacgcc tggccggctt atttttatcc acagtaaatc ttcagcaact cattgtctcc
     3421 accagatagt atttttctgt aaatgaaatg ctgacttcgc ctcttcctgc tgtatgctca
     3481 tccctgcact gagcacagat atgacaagca gtagccatgg gggaggtggg tgacaaagat
     3541 aggaccccgg gagggggcgc aggtacatgc tagtttcaat taccacagta ttctagagac
     3601 gggttgcaat gacaaggggg gcaaatgaaa tcaatgcaag atttcttaat aatgggcaga
     3661 cagaaaaatg taaaaccaca caaaacggac tgctgataat attttaaaat atacttattt
     3721 gtcttctttt tgcattgtga aaaaaacaaa ataaattttg tgtgataatt ttgatgatga
     3781 aaggtggaag ttctacctag atttgaatga gtgttttttt aagggaatga gaatgtcatg
     3841 gtgctaaacc tgacaaataa gagatcattg aaatgctgaa aattttaaca gtcttcttaa
     3901 aagtattgag ggggcaaaaa ttaccaatta tggtatacaa aaataagcct ataaatgtgt
     3961 ttcacattgc taacttgagt ttcagttgat tcagtttgta ataactagta atgagcttct
     4021 gtttacaata aaaattctgt aaattg
//
