LOCUS       XM_047425668            2321 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens surfactant protein A1 (SFTPA1), transcript
            variant X2, mRNA.
ACCESSION   XM_047425668
VERSION     XM_047425668.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000010.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="10"
     gene            1..2321
                     /gene="SFTPA1"
                     /gene_synonym="COLEC4; ILD1; PSAP; PSP-A; PSPA; SFTP1;
                     SFTPA1B; SP-A; SP-A1; SP-A1 beta; SP-A1 delta; SP-A1
                     epsilon; SP-A1 gamma; SPA; SPA1"
                     /note="surfactant protein A1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 17 ESTs, 90 long SRA reads, 30 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 6 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:653509"
                     /db_xref="HGNC:HGNC:10798"
                     /db_xref="MIM:178630"
     CDS             188..979
                     /gene="SFTPA1"
                     /gene_synonym="COLEC4; ILD1; PSAP; PSP-A; PSPA; SFTP1;
                     SFTPA1B; SP-A; SP-A1; SP-A1 beta; SP-A1 delta; SP-A1
                     epsilon; SP-A1 gamma; SPA; SPA1"
                     /codon_start=1
                     /product="pulmonary surfactant-associated protein A1
                     isoform X1"
                     /protein_id="XP_047281624.1"
                     /db_xref="GeneID:653509"
                     /db_xref="HGNC:HGNC:10798"
                     /db_xref="MIM:178630"
                     /translation="MRPCQVPGAATGPRAMWLCPLALNLILMAASGAVCEVKDVCVGS
                     PGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE
                     KGEPGERGPPGLPAHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQS
                     ITFDAIQEACARAGGRIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDG
                     TPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLYSRLTICEF"
ORIGIN      
        1 gacttggagg cagagaccca agcagctgga ggctctgtgt gtgggctgcg ggccccgttc
       61 atcttttttc attctcaggt cgctgatttc ttggagcctg aaaagaaagt aacacagcag
      121 ggatgaggac agatggtgtg agtcagtgac ctggagaccc cacaacctcc agccggaggc
      181 ctgaagcatg aggccatgcc aggtgccagg agcagcgact ggacccagag ccatgtggct
      241 gtgccctctg gccctcaacc tcatcttgat ggcagcctct ggtgctgtgt gcgaagtgaa
      301 ggacgtttgt gttggaagcc ctggtatccc cggcactcct ggatcccacg gcctgccagg
      361 cagggacggg agagatggtc tcaaaggaga ccctggccct ccaggcccca tgggtccacc
      421 tggagaaatg ccatgtcctc ctggaaatga tgggctgcct ggagcccctg gtatccctgg
      481 agagtgtgga gagaaggggg agcctggcga gaggggccct ccagggcttc cagctcatct
      541 agatgaggag ctccaagcca cactccacga ctttagacat caaatcctgc agacaagggg
      601 agccctcagt ctgcagggct ccataatgac agtaggagag aaggtcttct ccagcaatgg
      661 gcagtccatc acttttgatg ccattcagga ggcatgtgcc agagcaggcg gccgcattgc
      721 tgtcccaagg aatccagagg aaaatgaggc cattgcaagc ttcgtgaaga agtacaacac
      781 atatgcctat gtaggcctga ctgagggtcc cagccctgga gacttccgct actcagacgg
      841 gacccctgta aactacacca actggtaccg aggggagccc gcaggtcggg gaaaagagca
      901 gtgtgtggag atgtacacag atgggcagtg gaatgacagg aactgcctgt actcccgact
      961 gaccatctgt gagttctgag aggcatttag gccatgggac agggaggacg ctctctggcc
     1021 ttcggcctcc atcctgaggc tccacttggt ctgtgagatg ctagaactcc ctttcaacag
     1081 aattcacttg tggctattgg gactggaggc acccttagcc acttcattcc tctgatgggc
     1141 cctgactctt ccccataatc actgaccagc cttgacactc cccttgcaaa ctctcccagc
     1201 actgcacccc aggcagccac tcttagcctt ggccttcgac atgagatgga gccctcctta
     1261 ttccccatct ggtccagttc cttcacttac agatggcagc agtgaggtct tggggtagaa
     1321 ggaccctcca aagtcacaca aagtgcctgc ctcctggtcc cctcagctct ctctctgcaa
     1381 cccagtgcca tcaggatgag caatcctggc caagcataat gacagagaga ggcagacttc
     1441 ggggaagccc tgactgtgca gagctaagga cacagtggag attctctggc actctgaggt
     1501 ctctgtggca ggcctggtca ggctctccat gaggttagaa ggccaggtag tgttccagca
     1561 gggtggtggc caagccaacc ccatgattga tgtgtacgat tcactccttt gagtctttga
     1621 atggcaactc agccccctga cctgaagaca gccagcctag gcctctaggg tgacctagag
     1681 ccgccttcag atgtgacccg agtaactttc aactgatgaa caaatctgca ccctacttca
     1741 gatttcagtg ggcattcaca ccacccccca caccactggc tctgctttct cctttcatta
     1801 atccattcac ccagatattt cattaaaatt atcacgtgcc aggtcttagg atatgtcgtg
     1861 gggtgggcaa ggtaatcagt gacagttgaa gatttttttt tcccagagct tatgtcttca
     1921 tctgtgaaat gggaataaga tacttgttgc tgtcacagtt attaccatcc ccccagctac
     1981 caaaattact accagaactg ttactataca cagaggctat tgactgagca cctatcattt
     2041 gccaagaacc ttgacaagca cttctaatac agcatattat gtactattca atctttacac
     2101 aatgtcacgg gaccagtatt gtttcctcat tttttataag gacactgaag cttggaggag
     2161 ttaaatgttt tgagtattat tccagagagc aagtggcaga ggctggatcc aaacccatct
     2221 tcctggacct gaagcttatg cttccagcca ccccactcct gagctgaata aagatgattt
     2281 aagcttaata aatcgtgaat gtgttcacat gagtttccat a
//
