LOCUS       XM_017019798            3015 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens splicing factor SWAP (SFSWAP), transcript
            variant X3, mRNA.
ACCESSION   XM_017019798
VERSION     XM_017019798.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000012.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
     gene            1..3015
                     /gene="SFSWAP"
                     /gene_synonym="SFRS8; SWAP"
                     /note="splicing factor SWAP; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 38
                     ESTs, 538 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     116 samples with support for all annotated introns"
                     /db_xref="GeneID:6433"
                     /db_xref="HGNC:HGNC:10790"
                     /db_xref="MIM:601945"
     CDS             141..2765
                     /gene="SFSWAP"
                     /gene_synonym="SFRS8; SWAP"
                     /codon_start=1
                     /product="splicing factor, suppressor of white-apricot
                     homolog isoform X3"
                     /protein_id="XP_016875287.1"
                     /db_xref="GeneID:6433"
                     /db_xref="HGNC:HGNC:10790"
                     /db_xref="MIM:601945"
                     /translation="MYGASGGRAKPERKSGAKEEAGPGGAGGGGSRVELLVFGYACKL
                     FRDDERALAQEQGQHLIPWMGDHKILIDRYDGRGHLHDLSEYDAEYSTWNRDYQLSEE
                     EARIEALCDEERYLALHTDLLEEEARQEEEYKRLSEALAEDGSYNAVGFTYGSDYYDP
                     SEPTEEEEPSKQREKNEAENLEENEEPFVAPLGLSVPSDVELPPTAKMHAIIERTASF
                     VCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEK
                     KKSGVSSDNEDDDDEEDGNYLHPSLFASKKCNRLEELMKPLKVVDPDHPLAALVRKAQ
                     ADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVTTY
                     YSTLPAGVTVSNSPGVTTTAPPPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAII
                     PPPPDVQPVIDKLAEYVARNGLKFETSVRAKNDQRFEFLQPWHQYNAYYEFKKQFFLQ
                     KEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSGGKKEASSSKTV
                     PDGKLVKAKQKLEDRLAAAAREKLAQASKESKEKQLQAERKRKAALFLQTLKNPLPEA
                     EAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKEKKKK
                     KHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPE
                     RRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQA
                     APRPAAPAAHSAHSASVSPVESRGSSQERSRGVSQEKEAQISSAIVSSVQSKITQDLM
                     AKVRAMLAASKNLQTSAS"
ORIGIN      
        1 attttgtggc ccgctatggc ggcggtgttg aggttgggta cgggatgcgg ggtctttgac
       61 tgaaggggta ggccaagtgg aggtatcagg gacgtcgcgc ggcacagaag aggaccagcc
      121 tggacgccgg ggacgctgtc atgtacggcg cgagcggggg ccgcgccaaa cccgagagga
      181 aaagcggcgc gaaggaggag gccgggccag gcggtgccgg cggtgggggc agccgagtgg
      241 agctcttggt tttcggctat gcctgcaagc tgttccggga cgacgagcgg gccctggctc
      301 aggaacaggg acagcacctc atcccctgga tgggggacca caagatcctc atcgacagat
      361 atgatggacg tggtcacctg catgaccttt ctgagtacga tgctgagtat tccacgtgga
      421 acagagatta tcagctgtct gaagaggagg cgcgaataga ggccctgtgt gatgaagaga
      481 ggtatttagc cttgcatacg gacttgcttg aggaggaggc aaggcaagag gaagaataca
      541 agcgattgag tgaagcacta gcagaggatg ggagctacaa tgccgtgggg ttcacttacg
      601 gtagcgacta ttacgacccg tcagagccga cggaggagga ggagccttcc aaacagagag
      661 aaaaaaatga ggccgaaaat ttagaggaaa atgaagagcc cttcgttgcc cccttaggat
      721 tgagcgtccc gtctgacgtg gagttgccac caaccgctaa aatgcacgcc atcatcgagc
      781 gcacggccag cttcgtgtgc aggcagggag cacagtttga gatcatgctg aaggccaagc
      841 aggcccggaa ctcccagttt gactttctgc gcttcgacca ctacctcaac ccctactata
      901 agttcatcca gaaagccatg aaagagggac gctacactgt cctggcagaa aacaaaagtg
      961 acgagaaaaa aaaatcagga gtcagctctg acaatgaaga tgatgatgat gaagaagatg
     1021 ggaattacct tcatccctct ctctttgcct ccaagaagtg taaccgcctt gaagagctga
     1081 tgaagccctt gaaggtagtg gacccagatc atcccctcgc agcacttgtt cgtaaggcac
     1141 aggctgacag ttccactccc accccacaca acgcagacgg tgcgcctgtg cagccctccc
     1201 aggtggagta cacggcagac tcgaccgtgg cagccatgta ttacagctac tacatgctac
     1261 cggacggcac ttactgcctg gcgccgcccc ctcccggaat cgacgtgact acttactaca
     1321 gcacccttcc tgctggcgtg accgtgtcta actcccctgg agtgacgacc accgccccac
     1381 cacctcctgg gaccacacca ctaccgcccc caaccacagc agagactagc agcggggcca
     1441 cctccacaac caccaccaca agtgcacttg cccccgtggc cgccatcatc cccccgcccc
     1501 ccgacgtcca gcccgtgatt gacaagctgg ccgagtatgt cgccaggaac ggcctgaagt
     1561 tcgagaccag tgttcgtgcc aagaatgatc aaagatttga gttcctgcag ccgtggcacc
     1621 agtataatgc ttattatgag tttaagaagc agttcttcct ccagaaagaa gggggcgata
     1681 gcatgcaggc tgtgtctgca ccagaagagg ctcccacaga ctctgctccc gagaagccaa
     1741 gtgatgctgg ggaggatggc gcgcctgaag acgcagccga ggtgggagca cgggcaggct
     1801 caggcgggaa gaaggaggca tcgtccagta agaccgtccc ggacgggaag ctggtgaaag
     1861 caaagcaaaa gctggaagat cgcctcgcag ctgctgcccg ggaaaagctg gcccaggcgt
     1921 ctaaggagtc aaaagagaaa cagcttcaag cagaacgtaa aaggaaagcg gcgttatttt
     1981 tacagaccct caaaaatcct ctgccggaag cagaagctgg gaaaattgag gagagtcctt
     2041 tcagtgtcga ggaatccagc actacgccct gccctctact gactggaggc aggcctctgc
     2101 ctactttaga agttaaacca cccgataggc cttcgagcaa aagcaaagat ccaccgagag
     2161 aagaagagaa agaaaagaaa aagaaaaagc acaaaaaaag atctcgaaca agatcacgtt
     2221 ctcccaagta ccattcgtca tccaagtcca ggtctagatc acactcaaaa gcaaagcatt
     2281 ctcttcccag tgcctatcgg acagtgcggc ggtcgaggtc ccgctcccgg tcccctcgga
     2341 ggagagccca ctcccctgag agacggaggg aagagaggag tgtgcccact gcctaccgcg
     2401 tgagccgcag ccctggggcc agtaggaagc ggacccgctc cagaagtccc cacgagaaga
     2461 agaagaagag gcggtcccgg tcgcggacca agtccaaggc caggtctcag tcggtgtcac
     2521 ccagcaagca ggcagcgccc cggcccgcgg cccccgcggc ccactcggcg cactcagcca
     2581 gcgtctcccc tgtggagagt cggggctcca gccaggagcg ctccagggga gtctctcagg
     2641 aaaaagaagc ccagatctct tcagcaatcg tttcttccgt gcagagcaaa atcactcagg
     2701 atctcatggc caaagtcaga gcgatgcttg cagcttccaa aaacctgcaa accagcgctt
     2761 cctgagacgg ggccagcgga ggcagagccg ggaggctgcg tgggcttctg ggcaggctca
     2821 cgcagacgcc ggccacacca tccacctggc cgcctccatg gacccttggt ggcttttgta
     2881 aattaatttt tgatgacatt ttgagtttta agatttctga ccagcagtct cttacctgta
     2941 tatttgtaaa tatatcatgt ttctgtgaaa atgtattatg aaataaaatg ggaggaaaca
     3001 ccttttctag ctaga
//
