LOCUS       XM_011538653            3171 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens splicing factor SWAP (SFSWAP), transcript
            variant X1, mRNA.
ACCESSION   XM_011538653
VERSION     XM_011538653.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000012.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3171
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
     gene            1..3171
                     /gene="SFSWAP"
                     /gene_synonym="SFRS8; SWAP"
                     /note="splicing factor SWAP; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 34
                     ESTs, 494 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     12 samples with support for all annotated introns"
                     /db_xref="GeneID:6433"
                     /db_xref="HGNC:HGNC:10790"
                     /db_xref="MIM:601945"
     CDS             141..2921
                     /gene="SFSWAP"
                     /gene_synonym="SFRS8; SWAP"
                     /codon_start=1
                     /product="splicing factor, suppressor of white-apricot
                     homolog isoform X1"
                     /protein_id="XP_011536955.1"
                     /db_xref="GeneID:6433"
                     /db_xref="HGNC:HGNC:10790"
                     /db_xref="MIM:601945"
                     /translation="MYGASGGRAKPERKSGAKEEAGPGGAGGGGSRVELLVFGYACKL
                     FRDDERALAQEQGQHLIPWMGDHKILIDRYDGRGHLHDLSEYDAEYSTWNRDYQLSEE
                     EARIEALCDEERYLALHTDLLEEEARQEEEYKRLSEALAEDGSYNAVGFTYGSDYYDP
                     SEPTEEEEPSKQREKNEAENLEENEEPFVAPLGLSVPSDVELPPTAKMHAIIERTASF
                     VCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEK
                     KKSGVSSDNEDDDDEEDGNYLHPSLFASKKCNRLEELMKPLKVVDPDHPLAALVRKAQ
                     ADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVTTY
                     YSTLPAGVTVSNSPGVTTTAPPPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAII
                     PPPPDVQPVIDKLAEYVARNGLKFETSVRAKNDQRFEFLQPWHQYNAYYEFKKQFFLQ
                     KEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSGGKKEASSSKTV
                     PDGKLVKAKQKLEDRLAAAAREKLAQASKESKEKQLQAERKRKAALFLQTLKNPLPEA
                     EAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKEKKKK
                     KHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRVTASPGTLRAEPCQ
                     SSASVTAAAEPGSYQAASTTTRFDSASSFEGKPGKTSRSRSRSPRRRAHSPERRREER
                     SVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAA
                     PAAHSAHSASVSPVESRGSSQERSRGVSQEKEAQISSAIVSSVQSKITQDLMAKVRAM
                     LAASKNLQTSAS"
ORIGIN      
        1 attttgtggc ccgctatggc ggcggtgttg aggttgggta cgggatgcgg ggtctttgac
       61 tgaaggggta ggccaagtgg aggtatcagg gacgtcgcgc ggcacagaag aggaccagcc
      121 tggacgccgg ggacgctgtc atgtacggcg cgagcggggg ccgcgccaaa cccgagagga
      181 aaagcggcgc gaaggaggag gccgggccag gcggtgccgg cggtgggggc agccgagtgg
      241 agctcttggt tttcggctat gcctgcaagc tgttccggga cgacgagcgg gccctggctc
      301 aggaacaggg acagcacctc atcccctgga tgggggacca caagatcctc atcgacagat
      361 atgatggacg tggtcacctg catgaccttt ctgagtacga tgctgagtat tccacgtgga
      421 acagagatta tcagctgtct gaagaggagg cgcgaataga ggccctgtgt gatgaagaga
      481 ggtatttagc cttgcatacg gacttgcttg aggaggaggc aaggcaagag gaagaataca
      541 agcgattgag tgaagcacta gcagaggatg ggagctacaa tgccgtgggg ttcacttacg
      601 gtagcgacta ttacgacccg tcagagccga cggaggagga ggagccttcc aaacagagag
      661 aaaaaaatga ggccgaaaat ttagaggaaa atgaagagcc cttcgttgcc cccttaggat
      721 tgagcgtccc gtctgacgtg gagttgccac caaccgctaa aatgcacgcc atcatcgagc
      781 gcacggccag cttcgtgtgc aggcagggag cacagtttga gatcatgctg aaggccaagc
      841 aggcccggaa ctcccagttt gactttctgc gcttcgacca ctacctcaac ccctactata
      901 agttcatcca gaaagccatg aaagagggac gctacactgt cctggcagaa aacaaaagtg
      961 acgagaaaaa aaaatcagga gtcagctctg acaatgaaga tgatgatgat gaagaagatg
     1021 ggaattacct tcatccctct ctctttgcct ccaagaagtg taaccgcctt gaagagctga
     1081 tgaagccctt gaaggtagtg gacccagatc atcccctcgc agcacttgtt cgtaaggcac
     1141 aggctgacag ttccactccc accccacaca acgcagacgg tgcgcctgtg cagccctccc
     1201 aggtggagta cacggcagac tcgaccgtgg cagccatgta ttacagctac tacatgctac
     1261 cggacggcac ttactgcctg gcgccgcccc ctcccggaat cgacgtgact acttactaca
     1321 gcacccttcc tgctggcgtg accgtgtcta actcccctgg agtgacgacc accgccccac
     1381 cacctcctgg gaccacacca ctaccgcccc caaccacagc agagactagc agcggggcca
     1441 cctccacaac caccaccaca agtgcacttg cccccgtggc cgccatcatc cccccgcccc
     1501 ccgacgtcca gcccgtgatt gacaagctgg ccgagtatgt cgccaggaac ggcctgaagt
     1561 tcgagaccag tgttcgtgcc aagaatgatc aaagatttga gttcctgcag ccgtggcacc
     1621 agtataatgc ttattatgag tttaagaagc agttcttcct ccagaaagaa gggggcgata
     1681 gcatgcaggc tgtgtctgca ccagaagagg ctcccacaga ctctgctccc gagaagccaa
     1741 gtgatgctgg ggaggatggc gcgcctgaag acgcagccga ggtgggagca cgggcaggct
     1801 caggcgggaa gaaggaggca tcgtccagta agaccgtccc ggacgggaag ctggtgaaag
     1861 caaagcaaaa gctggaagat cgcctcgcag ctgctgcccg ggaaaagctg gcccaggcgt
     1921 ctaaggagtc aaaagagaaa cagcttcaag cagaacgtaa aaggaaagcg gcgttatttt
     1981 tacagaccct caaaaatcct ctgccggaag cagaagctgg gaaaattgag gagagtcctt
     2041 tcagtgtcga ggaatccagc actacgccct gccctctact gactggaggc aggcctctgc
     2101 ctactttaga agttaaacca cccgataggc cttcgagcaa aagcaaagat ccaccgagag
     2161 aagaagagaa agaaaagaaa aagaaaaagc acaaaaaaag atctcgaaca agatcacgtt
     2221 ctcccaagta ccattcgtca tccaagtcca ggtctagatc acactcaaaa gcaaagcatt
     2281 ctcttcccag tgcctatcgg acagtgcggc ggtcgagagt cacagcctcc ccagggacgc
     2341 tgcgcgcgga gccctgtcag agcagcgcgt cagtgacagc ggcagccgag ccaggaagtt
     2401 atcaggcagc ctcgaccacc accagatttg actccgcgag ctcttttgag ggaaaacctg
     2461 gtaaaacgtc aaggtcccgc tcccggtccc ctcggaggag agcccactcc cctgagagac
     2521 ggagggaaga gaggagtgtg cccactgcct accgcgtgag ccgcagccct ggggccagta
     2581 ggaagcggac ccgctccaga agtccccacg agaagaagaa gaagaggcgg tcccggtcgc
     2641 ggaccaagtc caaggccagg tctcagtcgg tgtcacccag caagcaggca gcgccccggc
     2701 ccgcggcccc cgcggcccac tcggcgcact cagccagcgt ctcccctgtg gagagtcggg
     2761 gctccagcca ggagcgctcc aggggagtct ctcaggaaaa agaagcccag atctcttcag
     2821 caatcgtttc ttccgtgcag agcaaaatca ctcaggatct catggccaaa gtcagagcga
     2881 tgcttgcagc ttccaaaaac ctgcaaacca gcgcttcctg agacggggcc agcggaggca
     2941 gagccgggag gctgcgtggg cttctgggca ggctcacgca gacgccggcc acaccatcca
     3001 cctggccgcc tccatggacc cttggtggct tttgtaaatt aatttttgat gacattttga
     3061 gttttaagat ttctgaccag cagtctctta cctgtatatt tgtaaatata tcatgtttct
     3121 gtgaaaatgt attatgaaat aaaatgggag gaaacacctt ttctagctag a
//
