LOCUS       XM_005244835            3973 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens semaphorin 6C (SEMA6C), transcript variant
            X3, mRNA.
ACCESSION   XM_005244835
VERSION     XM_005244835.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_005244835.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3973
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..3973
                     /gene="SEMA6C"
                     /gene_synonym="m-SemaY; m-SemaY2; Sema-Y; SEMAY"
                     /note="semaphorin 6C; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 15 ESTs, 35 long
                     SRA reads, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 9 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:10500"
                     /db_xref="HGNC:HGNC:10740"
                     /db_xref="MIM:609294"
     CDS             308..3196
                     /gene="SEMA6C"
                     /gene_synonym="m-SemaY; m-SemaY2; Sema-Y; SEMAY"
                     /codon_start=1
                     /product="semaphorin-6C isoform X1"
                     /protein_id="XP_005244892.1"
                     /db_xref="GeneID:10500"
                     /db_xref="HGNC:HGNC:10740"
                     /db_xref="MIM:609294"
                     /translation="MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPL
                     SWFRGLEDDAVAAELGLDFQRFLTLNRTLLVAARDHVFSFDLQAEEEGEGLVPNKYLT
                     WRSQDVENCAVRGKLTDECYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEG
                     EELSGQARCPFDATQSNVAIFAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDS
                     KWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRH
                     WTSFLKLRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAF
                     YLDEIERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDV
                     LTFIKAHPLLDPAVPPVTHQPLLTLTSRALLTQVAVDGMAGPHSNITVMFLGSNDGTV
                     LKVLTPGGRSGGPEPILLEEIDAYSPARCSGKRTAQTARRIIGLELDTEGHRLFVAFS
                     GCIVYLPLSRCARHGACQRSCLASQDPYCGWHSSRGCVDIRGSGGTDVDQAGNQESME
                     HGDCQDGATGSQSGPGDSAYVLPGPGPSPGTPSPPSDAHPRPQSSTLGVHTRGVRRDL
                     PPASASRSVPIPLLLASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLS
                     LRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPESTPELP
                     VKHLRAAGDPWEWNQNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTT
                     LEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGPSPRPHECASPLRLDVPP
                     EGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKH
                     LLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGGRFNF"
ORIGIN      
        1 attgttttcc tccgcggatc cgcggctgga cttggaccca gggctctccc gacagcgccc
       61 tggaacccaa attcaagcac catccaattc ggacgctcat cgcatctcgc ctgagcacaa
      121 ccacggattg cgaactcagc gcagcgcgtg gccgctggcc gcccgcggcg atctcgatcc
      181 cgctgacccg aatcctggag caagtcagag gtttcctatc cccctcaagc ccccacagga
      241 gtcaccaacc cagggccggc ttatgggtga gggggcaccc cctggggcct gagctgcccc
      301 gcacaggatg ccccgtgccc cccacttcat gcccttgctg ctactgctgc tgctgctctc
      361 acttccccat actcaggccg cctttcccca ggaccccctc cctctgttga tctctgacct
      421 tcaaggtact tccccattat cctggtttcg gggcctggag gatgatgctg tggctgcaga
      481 acttgggctg gactttcaga gattcctgac cttgaaccgg accttgctag tggctgcccg
      541 ggatcacgtt ttctccttcg atcttcaagc cgaagaagaa ggggaggggc tggtgcccaa
      601 caagtatcta acatggagaa gccaagatgt ggagaactgt gctgtacggg gaaagctgac
      661 ggatgagtgc tacaactata ttcgtgttct tgttccctgg gactcccaga cgctccttgc
      721 ctgtggaacg aactcattca gccctgtgtg ccgcagctat gggataactt cgctgcagca
      781 ggagggtgag gaactgagtg ggcaggctcg atgccccttt gatgccaccc agtccaacgt
      841 ggccatcttt gcagagggca gcctgtactc agccacagct gcggatttcc aggccagtga
      901 tgctgtagtt tacagaagcc ttgggcccca gcccccactc cgctccgcca agtatgactc
      961 caagtggctc cgagagccac actttgtcca ggccttggag catggagacc atgtctactt
     1021 cttcttccgc gaggtctctg tggaggatgc tcggctgggg agggtgcagt tctcccgcgt
     1081 agcccgagta tgtaaacgtg acatgggcgg ctcgcctcgg gccttggacc gccactggac
     1141 atccttcctg aagcttcggc tcaactgctc tgtccctggg gactctactt tctattttga
     1201 tgttttacag gccttgactg ggcctgtgaa cctgcatggc cgctctgctc tctttggggt
     1261 cttcaccacc cagaccaata gcatccctgg ctctgccgtc tgcgccttct acctggatga
     1321 gattgagcgt gggtttgagg gcaagttcaa ggagcagagg agtctggatg gggcctggac
     1381 tcctgtgtct gaggacagag ttccctcacc caggccagga tcctgtgcag gagtaggggg
     1441 agctgccttg ttctcctctt cccgagacct ccctgatgat gtcctgacct tcatcaaggc
     1501 tcacccgctg ctggaccccg ctgtaccacc tgtcacccat cagcctctac tcactctcac
     1561 tagcagggcc ctactgaccc aagtagctgt ggatggcatg gctggtcccc acagtaacat
     1621 cacagtcatg ttccttggct ccaatgatgg gacagtgctg aaggtgctga ccccaggtgg
     1681 gcgatccggg ggacctgagc ccatcctcct ggaagagatt gatgcctaca gccctgcccg
     1741 gtgcagtggg aagcggacag cccaaacagc acgacggatc atagggctgg agctggacac
     1801 tgagggtcac aggctttttg tggctttttc tggctgtatt gtctacctcc ctctcagccg
     1861 gtgtgcccgg catggggcct gtcagaggag ctgtttggct tctcaggacc catactgtgg
     1921 atggcatagc tccaggggct gtgtggatat caggggatct ggtgggactg atgtggatca
     1981 ggctgggaac caggaatcca tggagcatgg tgactgccaa gatggagcta ctgggagtca
     2041 gtctggccct ggggattctg cttatgtgct tccgggtcct ggcccttccc ctgggacccc
     2101 cagtcctccc agtgatgccc acccccggcc ccagtcttcc actcttggag ttcacactcg
     2161 gggcgtgcgc cgggacctgc ccccagcctc ggcctcccgc tccgtcccca tcccactcct
     2221 cctggccagt gtggccgcag cttttgccct gggcgcctca gtctctggcc tcctggtctc
     2281 ctgtgcttgt cgccgcgccc accgacgtcg gggcaaggac atcgagactc cggggctccc
     2341 gcgccctctc tccctccgca gtttggcccg gctccacggt gggggcccag agcccccgcc
     2401 gccctccaag gacggggacg cggtgcagac gccgcagctc tacaccacct tcctgccgcc
     2461 tccggagggc gtgcccccgc cggagctggc ctgcctgccc acccccgagt ccacgccgga
     2521 gctgccggtc aagcacctcc gcgccgccgg ggacccctgg gagtggaacc agaacaggaa
     2581 caacgccaag gagggtccgg gccgctcacg gggcgggcac gcggcgggcg ggcccgcgcc
     2641 ccgcgtgctg gtgaggccac cgccgcccgg ctgtcccggg caggccgtgg aagtcaccac
     2701 cctggaggaa ctgctgcgct acctgcacgg cccgcagccg cccagaaagg gggccgagcc
     2761 ccccgcccct ttaacctcgc gggcgctccc gccggagccc gcccccgccc tcttgggcgg
     2821 ccccagcccc aggccccacg agtgcgcctc gccgctgagg ctggacgtgc cccccgaggg
     2881 caggtgcgcc tctgcccccg cccggcccgc gctctccgcc cccgctcccc ggctgggcgt
     2941 cggcggaggc cggaggttgc ctttctccgg ccaccgggcc ccccctgccc tgctcactcg
     3001 agtcccctcg ggaggtccct ccaggtactc cgggggtccc gggaagcacc tcctgtacct
     3061 gggccggccc gagggctacc ggggccgcgc cctgaaaagg gtggacgtcg agaagcccca
     3121 gttgtccctg aagcctcccc tcgtcgggcc ctcctcccgc caggccgtcc cgaacggcgg
     3181 ccgtttcaac ttttaaaggg agcggcccac ggcctccagc gtggggagcg cccgagtcct
     3241 ctcggccacg agctggacgc tcttcaggac gtttcaccgc cccctcgccc cgcacctcca
     3301 gccttcccga ctcgcagagt ctcccgaggc cccttttcgc ctcgggttta tttattgact
     3361 gtctttcccc ctgtcctcga cagaagagtg ggaggtgaga agcccgtctc ctcagtgagc
     3421 cagcatttca gggggagctg gcggactccc actccccgct cccttccagc caagctgcct
     3481 taactcgccc ctcggggctc ccccagagac tgtgccccgg gcgggccgcg cgcgctgtgt
     3541 ccagagtcct cgggccttct gggtctggga cgtgcctctc ctactgtgta ggagcctccg
     3601 cttcccaata cagccgtgtc tgcagccact gcctgacttc actcgggcgg gggagggcgg
     3661 cagtcggtcg gctcgctctg ggcgccctcg ctctctgcct tcatctgggc cctgggctct
     3721 cccgggtaat gggatggctg cggtcccgcc ggggggcagt ctggaaaggt ttcctaaagg
     3781 agacgagcga attaacggtg tcgaggtgag ccagggccag ggggaccccg gtaaagttta
     3841 gttgaggctg gggaaggccc tcggagctcg tttccagatc gaggtaagag ggactttctt
     3901 aaaggcctag tctatgggat ggggcggcgg agggaatttt ttgagaaata aaatgaagct
     3961 gcagtgtacg tta
//
