LOCUS       XM_005265381            4152 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens semaphorin 3F (SEMA3F), transcript variant
            X1, mRNA.
ACCESSION   XM_005265381
VERSION     XM_005265381.5
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000003.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_005265381.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4152
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
     gene            1..4152
                     /gene="SEMA3F"
                     /gene_synonym="SEMA-IV; SEMA4; SEMAK"
                     /note="semaphorin 3F; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 41 ESTs, 55 long
                     SRA reads, 7 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments, including 43 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:6405"
                     /db_xref="HGNC:HGNC:10728"
                     /db_xref="MIM:601124"
     CDS             835..3192
                     /gene="SEMA3F"
                     /gene_synonym="SEMA-IV; SEMA4; SEMAK"
                     /codon_start=1
                     /product="semaphorin-3F isoform X1"
                     /protein_id="XP_005265438.1"
                     /db_xref="GeneID:6405"
                     /db_xref="HGNC:HGNC:10728"
                     /db_xref="MIM:601124"
                     /translation="MLVAGLLLWASLLTGAWPSFPTQDHLPATPRVRLSFKELKATGT
                     AHFFNFLLNTTDYRILLKDEDHDRMYVGSKDYVLSLDLHDINREPLIIHWAASPQRIE
                     ECVLSGKDVNGECGNFVRLIQPWNRTHLYVCGTGAYNPMCTYVNRGRRAQATPWTQTQ
                     AVRGRGSRATDGALRPMPTAPRQDYIFYLEPERLESGKGKCPYDPKLDTASALINEEL
                     YAGVYIDFMGTDAAIFRTLGKQTAMRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLY
                     FFFRERSAEAPQSPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIET
                     HFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEG
                     PNYQWMPFSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQR
                     RPLVVRTGAPYRLTTIAVDQVDAADGRYEVLFLGTDRGTVQKVIVLPKDDQELEELML
                     EEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRCQAYGAACADCCLARDPYC
                     AWDGQACSRYTASSKRRSRRQDVRHGNPIRQCRGFNSNANKNAVESVQYGVAGSAAFL
                     ECQPRSPQATVKWLFQRDPGDRRREIRAEDRFLRTEQGLLLRALQLSDRGLYSCTATE
                     NNFKHVVTRVQLHVLGRDAVHAALFPPLSMSAPPPPGAGPPTPPYQELAQLLAQPEVG
                     LIHQYCQGYWRHVPPSPREAPGAPRSPEPQDQKKPRNRRHHPPDT"
ORIGIN      
        1 gagcgccccg tcccgccggc ggccgcgaga ccagagcgag cgaacgaacc gcggcggtcc
       61 ggagagcccc gagcgcagcg caggacctgg gtacgccgcg aggaaccgtg cagcccagcg
      121 cggccgcccg gcccgggtcc agcagccagg agagcgcagc gcttcgaagc cgagtgcgcg
      181 ccaccgcccg cgccccgcgc tggggaatgc gccctcggcg cgccggccag ggggcgcccg
      241 cagcccaccc caggggaggc ggccccgagc gcccctgagc cttcccatgg cccgggctgg
      301 ggcccgggcc ctcggctgct gacgcgcccg aagcccgcgg aaccggttaa gccgcggccg
      361 cggcgccgat cccggctgag gcgcagcggc gagaggtcgc gggcagggcc atggccccgg
      421 ggggccgcta gcgcggaccg gcccaacggg agccgctccg tgccgccgcc gccgcccggg
      481 cgcccaggcc ccgccgctgc ggaagaggtg agtgcagcgg gaaccgggag ggagcgggca
      541 ggcggccggg ccaccccgcg acccctctgg gacccgcggc actgcaactc cgcagaagtg
      601 tccggggagc gggtctcgtc gagccggggg gctgcccgcg gacatagggg caacaaggct
      661 ggggtgggat tcttacctgt cctggaggcc cggacccctt acctacgggg cggcgtatgg
      721 atgtgtggat gatgtggcct gcggggtcac ccatgtgcaa agcaactttt tcctgcaagg
      781 ttctgggttt ctagagagtg gagcctgctt cctgggccct aggcccctcc cacaatgctt
      841 gtcgccggtc ttcttctctg ggcttcccta ctgaccgggg cctggccatc cttccccacc
      901 caggaccacc tcccggccac gccccgggtc cggctctcat tcaaagagct gaaggccaca
      961 ggcaccgccc acttcttcaa cttcctgctc aacacaaccg actaccgaat cttgctcaag
     1021 gacgaggacc acgaccgcat gtacgtgggc agcaaggact acgtgctgtc cctggacctg
     1081 cacgacatca accgcgagcc cctcattata cactgggcag cctccccaca gcgcatcgag
     1141 gaatgcgtgc tctcaggcaa ggatgtcaac ggcgagtgtg ggaacttcgt caggctcatc
     1201 cagccctgga accgaacaca cctgtatgtg tgcgggacag gtgcctacaa ccccatgtgc
     1261 acctatgtga accgcggacg ccgcgcccag gccacaccat ggacccagac tcaggcggtc
     1321 agaggccgcg gcagcagagc cacggatggt gccctccgcc cgatgcccac agccccacgc
     1381 caggattaca tcttctacct ggagcctgag cgactcgagt cagggaaggg caagtgtccg
     1441 tacgatccca agctggacac agcatcggcc ctcatcaatg aggagctcta tgctggtgtg
     1501 tacatcgatt ttatgggcac tgatgcagcc atcttccgca cacttggaaa gcagacagcc
     1561 atgcgcacgg atcagtacaa ctcccggtgg ctgaacgacc cgtcgttcat ccatgctgag
     1621 ctcattcctg acagtgcgga gcgcaatgat gataagcttt acttcttctt ccgtgagcgg
     1681 tcggcagagg cgccgcagag ccccgcggtg tacgcccgca tcgggcgcat ttgcctgaac
     1741 gatgacggtg gtcactgttg cctggtcaac aagtggagca cattcctgaa ggcgcggctc
     1801 gtctgctctg tcccgggcga ggatggcatt gagactcact ttgatgagct ccaggacgtg
     1861 tttgtccagc agacccagga cgtgaggaac cctgtcattt acgctgtctt tacctcctct
     1921 ggctccgtgt tccgaggctc tgccgtgtgt gtctactcca tggctgatat tcgcatggtc
     1981 ttcaacgggc cctttgccca caaagagggg cccaactacc agtggatgcc cttctcaggg
     2041 aagatgccct acccacggcc gggcacgtgc cctggtggaa ccttcacgcc atctatgaag
     2101 tccaccaagg attatcctga tgaggtgatc aacttcatgc gcagccaccc actcatgtac
     2161 caggccgtgt accctctgca gcggcggccc ctggtagtcc gcacaggtgc tccctaccgc
     2221 cttaccacta ttgccgtgga ccaggtggat gcagccgacg ggcgctatga ggtgcttttc
     2281 ctgggcacag accgcgggac agtgcagaag gtcattgtgc tgcccaagga tgaccaggag
     2341 ttggaggagc tcatgctgga ggaggtggag gtcttcaagg atccagcacc cgtcaagacc
     2401 atgaccatct cttctaagag gcaacaactc tacgtggcgt cagccgtggg tgtcacacac
     2461 ctgagcctgc accgctgcca ggcgtatggg gctgcctgtg ctgactgctg ccttgcccgg
     2521 gacccttact gtgcctggga tggccaggcc tgctcccgct atacagcatc ctccaagagg
     2581 cggagccgcc ggcaggacgt ccggcacgga aaccccatca ggcagtgccg tgggttcaac
     2641 tccaatgcca acaagaatgc cgtggagtct gtgcagtatg gcgtggccgg cagcgcagcc
     2701 ttccttgagt gccagccccg ctcgccccaa gccactgtta agtggctgtt ccagcgagat
     2761 cctggtgacc ggcgccgaga gattcgtgca gaggaccgct tcctgcgcac agagcagggc
     2821 ttgttgctcc gtgcactgca gctcagcgat cgtggcctct actcctgcac agccactgag
     2881 aacaacttta agcacgtcgt cacacgagtg cagctgcatg tactgggccg ggacgccgtc
     2941 catgctgccc tcttcccacc actgtccatg agcgccccgc cacccccagg cgcaggcccc
     3001 ccaacgcctc cttaccagga gttagcccag ctgctggccc agccagaagt gggcctcatc
     3061 caccagtact gccagggtta ctggcgccat gtgcccccca gccccaggga ggctccaggg
     3121 gcaccccggt ctcctgagcc ccaggaccag aaaaagcccc ggaaccgccg gcaccaccct
     3181 ccggacacat gaggccagct gcctgtgcct gccatgggcc agcctagccc ttgtcccttt
     3241 taatataaaa gatatatata tatatatata tatataaaat atctatattc tatacacacc
     3301 ctgcccctgc aaagacagta tttattggtg ggttgaatat agcctgcctc agtggcagca
     3361 tcctccaaaa cttagaccca tgctggtcag agacggcaga aaacagagcc tgcctaacca
     3421 ggcccagcca gttggtgggg ccaggccagg accacacagt ccccagactc agctggaagt
     3481 ctacctgctg gacagcctcc gccaagatct acaggacaaa gggagggagc aagccctact
     3541 cggatggggc acggactgtc caccttttct gatgtgtgtt gtcagcctgt gctgtggcat
     3601 agacatggat gcgaggacca ctttggagac tggggtggcc tcaagagcac acagagaagg
     3661 gaagaagggg ccatcacagg atgccagccc ctgcctgggt tgggggcact cagccacgac
     3721 cagccccttc ctgggtattt attctctatt tattggggat aggagaagag gcatcctgcc
     3781 tgggtgggac agcctcttca gccccttctc ccctccccgc ctggccaggg cagggccacc
     3841 ccactctacc tccttagctt tccctgtgcc actttgactc agaggctggg agcatagcag
     3901 aggggccagg cccaggcaga gctgacggga ggccccagct ctgaggggag ggggtccgtg
     3961 gtagaggcct ggggccggta gaggctcccc agggctccct tatgtccacc acttcagggg
     4021 atgggtgtgg atgtaattag ctctgggggg cagttgggta gatgggtggg ggctcctggt
     4081 ggccttctgc tgcccaggcc acagccgcct ttgggttcca tcttgctaat aaacactggc
     4141 tctgggacta ga
//
