LOCUS       NM_001097610             435 bp    mRNA    linear   PRI 07-APR-2024
DEFINITION  Homo sapiens secretoglobin family 1C member 2 (SCGB1C2), mRNA.
ACCESSION   NM_001097610 XM_927639
VERSION     NM_001097610.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 435)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC240565.4.
            
            On Dec 4, 2019 this sequence version replaced NM_001097610.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AI732981.1, AA863023.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2151405, SAMN03465412
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000595228.4/ ENSP00000471646.2
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-77                AC240565.4         77569-77645
            78-277              AC240565.4         78203-78402
            278-435             AC240565.4         78910-79067
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
                     /map="17p13.3"
     gene            1..435
                     /gene="SCGB1C2"
                     /gene_synonym="SCGB1C1"
                     /note="secretoglobin family 1C member 2"
                     /db_xref="GeneID:653486"
                     /db_xref="HGNC:HGNC:51242"
     exon            1..77
                     /gene="SCGB1C2"
                     /gene_synonym="SCGB1C1"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..310
                     /gene="SCGB1C2"
                     /gene_synonym="SCGB1C1"
                     /note="secretoglobin, family 1C, member 1-like;
                     Secretoglobin family 1C member 1; Secretoglobin RYD5"
                     /codon_start=1
                     /product="secretoglobin family 1C member 2 precursor"
                     /protein_id="NP_001091079.1"
                     /db_xref="CCDS:CCDS73933.1"
                     /db_xref="GeneID:653486"
                     /db_xref="HGNC:HGNC:51242"
                     /translation="MKGSRALLLVALTLFCICRMATGEDNDEFFMDFLQTLLVGTPEE
                     LYEGTLGKYNVNEDAKAAMTELKSCRDGLQPMHKAELVKLLVQVLGSQDGA"
     exon            78..277
                     /gene="SCGB1C2"
                     /gene_synonym="SCGB1C1"
                     /inference="alignment:Splign:2.1.0"
     exon            278..435
                     /gene="SCGB1C2"
                     /gene_synonym="SCGB1C1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcagctcct gagactgccg gcatgaaggg gagccgtgcc ctcctgctgg tggccctcac
       61 cctgttctgc atctgccgga tggccacggg ggaggacaac gatgagtttt tcatggactt
      121 cctgcaaaca ctactggtgg ggaccccaga ggagctctat gaggggacct tgggcaagta
      181 caatgtcaac gaagatgcca aggcagcaat gactgaactc aagtcctgca gagatggcct
      241 gcagccaatg cacaaggcgg agctggtcaa gctgctggtg caagtgctgg gcagtcagga
      301 cggtgcctaa gtggacctca gacatggctc agccatagga cctgccacac aagcagccgt
      361 ggacacaacg cccactacca cctcccacat ggaaatgtat cctcaaaccg tttaatcaat
      421 aaagcctctt ccgca
//
