LOCUS       XM_047447743            2960 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens SREBF chaperone (SCAP), transcript variant
            X16, mRNA.
ACCESSION   XM_047447743
VERSION     XM_047447743.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000003.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
     gene            1..2960
                     /gene="SCAP"
                     /note="SREBF chaperone; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 91 ESTs, 608 long SRA
                     reads, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 32 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:22937"
                     /db_xref="HGNC:HGNC:30634"
                     /db_xref="MIM:601510"
     CDS             94..2787
                     /gene="SCAP"
                     /codon_start=1
                     /product="sterol regulatory element-binding protein
                     cleavage-activating protein isoform X6"
                     /protein_id="XP_047303699.1"
                     /db_xref="GeneID:22937"
                     /db_xref="HGNC:HGNC:30634"
                     /db_xref="MIM:601510"
                     /translation="MAGLSSESWSIMKNMATELGIILIGYFTLVPAIQEFCLFAVVGL
                     VSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACLPSAKPVGQPTRYERQLAVRPS
                     TPHTITLQPSSFRNLRLPKRLRVVYFLARTRLAQRLIMAGTVVWIGILVYTDPAGLRN
                     YLAAQVTEQSPLGEGALAPMPVPSGMLPPSHPDPAFSIFPPDAPKLPENQTSPGESPE
                     RGGPAEVVHDSPVPEVTWGPEDEELWRKLSFRHWPTLFSYYNITLAKRYISLLPVIPV
                     TLRLNPREALEGRHPQDGRSAWPPPGPIPAGHWEAGPKGPGGVQAHGDVTLYKVAALG
                     LATGIVLVLLLLCLYRVLCPRNYGQLGGGPGRRRRGELPCDDYGYAPPETEIVPLVLR
                     GHLMDIECLASDGMLLVSCCLAGHVCVWDAQTGDCLTRIPRPGQRRDSGVGSGLEAQE
                     SWERLSDGGKAGPEEPGDSPPLRHRPRGPPPPSLFGDQPDLTCLIDTNFSAQPRSSQP
                     TQPEPRHRAVCGRSRDSPGYDFSCLVQRVYQEEGLAAVCTPALRPPSPGPVLSQAPED
                     EGGSPEKGSPSLAWAPSAEGSIWSLELQGNLIVVGRSSGRLEVWDAIEGVLCCSSEEV
                     SSGITALVFLDKRIVAARLNGSLDFFSLETHTALSPLQFRGTPGRGSSPASPVYSSSD
                     TVACHLTHTVPCAHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAI
                     TTVYIDQTMVLASGGQDGAICLWDVLTGSRVSHVFAHRGDVTSLTCTTSCVISSGLDD
                     LISIWDRSTGIKFYSIQQDLGCGASLGVISDNLLVTGGQGCVSFWDLNYGDLLQTVYL
                     GKNSEAQPARQILVLDNAAIVCNFGSELSLVYVPSVLEKLD"
ORIGIN      
        1 gggggctggc cctggctgcc gtggtcacag tgctcagctc gctgctcatg tctgtgggac
       61 tctgcacact cttcggcctg acgcccaccc tcaatggcgg gcctaagcag cgagagctgg
      121 tccatcatga agaacatggc cacggagctg ggcatcatcc tcatcggcta cttcacccta
      181 gtgcccgcca tccaggagtt ctgtctcttt gctgtcgtgg ggctggtgtc tgacttcttc
      241 cttcagatgc tgtttttcac cactgtcctg tccattgaca ttcgccggat ggagctagca
      301 gacctgaaca agcgactgcc ccctgaggcc tgcctgccct cagccaagcc agtgggacag
      361 ccaacgcgct acgagcggca gctggctgtg aggccgtcca caccccacac catcacgttg
      421 cagccgtctt ccttccgaaa cctgcggctc cccaagaggc tgcgtgttgt ctacttcctg
      481 gcccgcaccc gcctggcaca gcgcctcatc atggctggca ccgttgtctg gattggcatc
      541 ctggtataca cagacccagc agggctgcgc aactacctcg ctgcccaggt gacggaacag
      601 agcccattgg gtgagggagc cctggctccc atgcccgtgc ctagtggcat gctgcccccc
      661 agccacccgg accctgcctt ctccatcttc ccacctgatg cccctaagct acctgagaac
      721 cagacgtcgc caggcgagtc acctgagcgt ggaggtccag cagaggttgt ccatgacagc
      781 ccagtcccag aggtaacctg ggggcctgag gatgaggaac tttggaggaa attgtccttc
      841 cgccactggc cgacgctctt cagctattac aacatcacac tggccaagag gtacatcagc
      901 ctgctgcccg tcatcccagt cacgctccgc ctgaacccga gggaggctct ggagggccgg
      961 caccctcagg acggccgcag tgcctggccc ccaccggggc ccatacctgc tgggcactgg
     1021 gaagcaggac ccaagggccc aggtggggtg caggcccatg gagacgtcac gctgtacaag
     1081 gtggcggcgc tgggcctggc caccggcatc gtcttggtgc tgctgctgct ctgcctctac
     1141 cgcgtgctat gcccgcgcaa ctacgggcag ctgggtggtg ggcccgggcg gcggaggcgc
     1201 ggggagctgc cctgcgacga ctacggctat gcgccacccg agacggagat cgtgccgctt
     1261 gtgctgcgcg gccacctcat ggacatcgag tgcctggcca gcgacggcat gctgctggtg
     1321 agctgctgcc tggcaggcca cgtctgcgtg tgggacgcgc agaccgggga ttgcctaacg
     1381 cgcattccgc gcccagggca gcgccgggac agtggcgtgg gcagcgggct tgaggctcag
     1441 gagagctggg aacgactttc agatggtggg aaggctggtc cagaggagcc tggggacagc
     1501 cctcccctga gacaccgccc ccggggccct ccgccgcctt ccctcttcgg ggaccagcct
     1561 gacctcacct gcttaattga caccaacttt tcagcgcagc ctcggtcctc acagcccact
     1621 cagcccgagc cccggcaccg ggcggtctgt ggccgctctc gggactcccc aggctatgac
     1681 ttcagctgcc tggtgcagcg ggtgtaccag gaggaggggc tggcggccgt ctgcacacca
     1741 gccctgcgcc caccctcgcc tgggccggtg ctgtcccagg cccctgagga cgagggtggc
     1801 tcccccgaga aaggctcccc ttccctcgcc tgggccccca gtgccgaggg ttccatctgg
     1861 agcttggagc tgcagggcaa cctcatcgtg gtggggcgga gcagcggccg gctggaggtg
     1921 tgggacgcca ttgaaggggt gctgtgctgc agcagcgagg aggtctcctc aggcattacc
     1981 gctctggtgt tcttggacaa aaggattgtg gctgcacggc tcaacggttc ccttgatttc
     2041 ttctccttgg agacccacac tgccctcagc cccctgcagt ttagagggac cccagggcgg
     2101 ggcagttccc ctgcctctcc agtgtacagc agcagcgaca cagtggcctg tcacctgacc
     2161 cacacagtgc cctgtgcaca ccaaaaaccc atcacagccc tgaaagccgc tgctgggcgc
     2221 ttggtgactg ggagccaaga ccacacactg agagtgttcc gtctggagga ctcgtgctgc
     2281 ctcttcaccc ttcagggcca ctcaggggcc atcacgaccg tgtacattga ccagaccatg
     2341 gtgctggcca gtggaggaca agatggggcc atctgcctgt gggatgtact gactggcagc
     2401 cgggtcagcc atgtgtttgc tcaccgtggg gatgtcacct cccttacctg taccacctcc
     2461 tgtgtcatca gcagtggcct ggatgacctc atcagcatct gggaccgcag cacaggcatc
     2521 aagttctact ccattcagca ggacctgggc tgtggtgcaa gcttgggtgt catctcagac
     2581 aacctgctgg tgactggcgg ccagggctgt gtctcctttt gggacctaaa ctacggggac
     2641 ctgttacaga cagtctacct ggggaagaac agtgaggccc agcctgcccg ccagatcctg
     2701 gtgctggaca acgctgccat tgtctgcaac tttggcagtg agctcagcct ggtgtatgtg
     2761 ccctctgtgc tggagaagct ggactgagcg cagggcctcc ttgcccaggc aggaggctgg
     2821 ggtgctgtgt gggggccaat gcactgaacc tggacttggg ggaaagagcc gagtatcttc
     2881 cagccgctgc ctcctgactg taataatatt aaactttttt aaaaaaccat atcatcatct
     2941 gtcaggcact ttgggagcta
//
