LOCUS       XM_047447741            3909 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens SREBF chaperone (SCAP), transcript variant
            X13, mRNA.
ACCESSION   XM_047447741
VERSION     XM_047447741.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000003.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3909
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
     gene            1..3909
                     /gene="SCAP"
                     /note="SREBF chaperone; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 133 ESTs, 441
                     long SRA reads, and 98% coverage of the annotated genomic
                     feature by RNAseq alignments, including 36 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:22937"
                     /db_xref="HGNC:HGNC:30634"
                     /db_xref="MIM:601510"
     CDS             587..3736
                     /gene="SCAP"
                     /codon_start=1
                     /product="sterol regulatory element-binding protein
                     cleavage-activating protein isoform X3"
                     /protein_id="XP_047303697.1"
                     /db_xref="GeneID:22937"
                     /db_xref="HGNC:HGNC:30634"
                     /db_xref="MIM:601510"
                     /translation="MVSYTITLVFQHYHAKFLGSLRARLMLLHPSPNCSLRAESLVHV
                     HFKEEIGVAELIPLVTTYIILFAYIYFSTRKIDMVKSKWGLALAAVVTVLSSLLMSVG
                     LCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESW
                     SIMKNMATELGIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSIDIRRME
                     LADLNKRLPPEACLPSAKPVGQPTRYERQLAVRPSTPHTITLQPSSFRNLRLPKRLRV
                     VYFLARTRLAQRLIMAGTVVWIGILVYTDPAGLRNYLAAQVTEQSPLGEGALAPMPVP
                     SGMLPPSHPDPAFSIFPPDAPKLPENQTSPGESPERGGPAEVVHDSPVPEVTWGPEDE
                     ELWRKLSFRHWPTLFSYYNITLAKRYISLLPVIPVTLRLNPREALEGRHPQDGRSAWP
                     PPGPIPAGHWEAGPKGPGGVQAHGDVTLYKVAALGLATGIVLVLLLLCLYRVLCPRNY
                     GQLGGGPGRRRRGELPCDDYGYAPPETEIVPLVLRGHLMDIECLASDGMLLVSCCLAG
                     HVCVWDAQTGDCLTRIPRPGRQRRDSGVGSGLEAQESWERLSDGGKAGPEEPGDSPPL
                     RHRPRGPPPPSLFGDQPDLTCLIDTNFSAQPRSSQPTQPEPRHRAVCGRSRDSPGYDF
                     SCLVQRVYQEEGLAAVCTPALRPPSPGPVLSQAPEDEGGSPEKGSPSLAWAPSAEGSI
                     WSLELQGNLIVVGRSSGRLEVWDAIEGVLCCSSEEVSSGITALVFLDKRIVAARLNGS
                     LDFFSLETHTALSPLQFRGTPGRGSSPASPVYSSSDTVACHLTHTVPCAHQKPITALK
                     AAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQTMVLASGGQDGAICL
                     WDVLTGSRVSHVFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKFYSIQQDLGC
                     GASLGVISDNLLVTGGQGCVSFWDLNYGDLLQTVYLGKNSEAQPARQILVLDNAAIVC
                     NFGSELSLVYVPSVLEKLD"
ORIGIN      
        1 attactcgcc cccacctgtg gactctgacc gcaaacaagg agagcctact gagcagcctg
       61 agtgggtggg tactcgtcat gttcctgagg ccagcacaga gcgttgggtg gagactggct
      121 gaggcagggg tctgccagtg agattgagta tgtgggtgcc ccggtggctt atgtccagca
      181 gatatttgtg aagtcctcag tgtttccctg gcacaagaac ctcctggcag tagatgtatt
      241 tcgttcacct ttgtcccggg cattccaact ggtggaggag atccggaacc acgtgctgag
      301 agacagctct gggatcagga gcttggagga gttgtgtctg caagtgaccg acctgctgcc
      361 aggccttagg aagctcagga acctactccc tgagcatgga tgcctgctgc tgtcccctgg
      421 gaacttctgg cagaatgact gggaacgctt ccatgctgat cctgacatca ttgggaccat
      481 ccaccagcac gagcctaaaa ccctgcagac ttcagccaca ctcaaagact tgttatttgg
      541 tgttcctggg aagtacagcg gggtgagcct ctacaccagg aagaggatgg tctcctacac
      601 catcaccctg gtcttccagc actaccatgc caagttcctg ggcagcctgc gtgcccgcct
      661 gatgcttctg caccccagcc ccaactgcag ccttcgggcg gagagcctgg tccacgtgca
      721 cttcaaggag gagattggtg tcgctgagct catccccctt gtgaccacct acatcatctt
      781 gtttgcctac atctacttct ccacgcggaa gatcgacatg gtcaagtcca agtgggggct
      841 ggccctggct gccgtggtca cagtgctcag ctcgctgctc atgtctgtgg gactctgcac
      901 actcttcggc ctgacgccca ccctcaatgg cggcgagatt ttcccctacc ttgtggtggt
      961 tattgggtta gagaatgtgt tggtgctcac caagtctgtg gtctcaaccc cggtagacct
     1021 ggaggtgaag ctgcggatcg cccaaggcct aagcagcgag agctggtcca tcatgaagaa
     1081 catggccacg gagctgggca tcatcctcat cggctacttc accctagtgc ccgccatcca
     1141 ggagttctgt ctctttgctg tcgtggggct ggtgtctgac ttcttccttc agatgctgtt
     1201 tttcaccact gtcctgtcca ttgacattcg ccggatggag ctagcagacc tgaacaagcg
     1261 actgccccct gaggcctgcc tgccctcagc caagccagtg ggacagccaa cgcgctacga
     1321 gcggcagctg gctgtgaggc cgtccacacc ccacaccatc acgttgcagc cgtcttcctt
     1381 ccgaaacctg cggctcccca agaggctgcg tgttgtctac ttcctggccc gcacccgcct
     1441 ggcacagcgc ctcatcatgg ctggcaccgt tgtctggatt ggcatcctgg tatacacaga
     1501 cccagcaggg ctgcgcaact acctcgctgc ccaggtgacg gaacagagcc cattgggtga
     1561 gggagccctg gctcccatgc ccgtgcctag tggcatgctg ccccccagcc acccggaccc
     1621 tgccttctcc atcttcccac ctgatgcccc taagctacct gagaaccaga cgtcgccagg
     1681 cgagtcacct gagcgtggag gtccagcaga ggttgtccat gacagcccag tcccagaggt
     1741 aacctggggg cctgaggatg aggaactttg gaggaaattg tccttccgcc actggccgac
     1801 gctcttcagc tattacaaca tcacactggc caagaggtac atcagcctgc tgcccgtcat
     1861 cccagtcacg ctccgcctga acccgaggga ggctctggag ggccggcacc ctcaggacgg
     1921 ccgcagtgcc tggcccccac cggggcccat acctgctggg cactgggaag caggacccaa
     1981 gggcccaggt ggggtgcagg cccatggaga cgtcacgctg tacaaggtgg cggcgctggg
     2041 cctggccacc ggcatcgtct tggtgctgct gctgctctgc ctctaccgcg tgctatgccc
     2101 gcgcaactac gggcagctgg gtggtgggcc cgggcggcgg aggcgcgggg agctgccctg
     2161 cgacgactac ggctatgcgc cacccgagac ggagatcgtg ccgcttgtgc tgcgcggcca
     2221 cctcatggac atcgagtgcc tggccagcga cggcatgctg ctggtgagct gctgcctggc
     2281 aggccacgtc tgcgtgtggg acgcgcagac cggggattgc ctaacgcgca ttccgcgccc
     2341 aggcaggcag cgccgggaca gtggcgtggg cagcgggctt gaggctcagg agagctggga
     2401 acgactttca gatggtggga aggctggtcc agaggagcct ggggacagcc ctcccctgag
     2461 acaccgcccc cggggccctc cgccgccttc cctcttcggg gaccagcctg acctcacctg
     2521 cttaattgac accaactttt cagcgcagcc tcggtcctca cagcccactc agcccgagcc
     2581 ccggcaccgg gcggtctgtg gccgctctcg ggactcccca ggctatgact tcagctgcct
     2641 ggtgcagcgg gtgtaccagg aggaggggct ggcggccgtc tgcacaccag ccctgcgccc
     2701 accctcgcct gggccggtgc tgtcccaggc ccctgaggac gagggtggct cccccgagaa
     2761 aggctcccct tccctcgcct gggcccccag tgccgagggt tccatctgga gcttggagct
     2821 gcagggcaac ctcatcgtgg tggggcggag cagcggccgg ctggaggtgt gggacgccat
     2881 tgaaggggtg ctgtgctgca gcagcgagga ggtctcctca ggcattaccg ctctggtgtt
     2941 cttggacaaa aggattgtgg ctgcacggct caacggttcc cttgatttct tctccttgga
     3001 gacccacact gccctcagcc ccctgcagtt tagagggacc ccagggcggg gcagttcccc
     3061 tgcctctcca gtgtacagca gcagcgacac agtggcctgt cacctgaccc acacagtgcc
     3121 ctgtgcacac caaaaaccca tcacagccct gaaagccgct gctgggcgct tggtgactgg
     3181 gagccaagac cacacactga gagtgttccg tctggaggac tcgtgctgcc tcttcaccct
     3241 tcagggccac tcaggggcca tcacgaccgt gtacattgac cagaccatgg tgctggccag
     3301 tggaggacaa gatggggcca tctgcctgtg ggatgtactg actggcagcc gggtcagcca
     3361 tgtgtttgct caccgtgggg atgtcacctc ccttacctgt accacctcct gtgtcatcag
     3421 cagtggcctg gatgacctca tcagcatctg ggaccgcagc acaggcatca agttctactc
     3481 cattcagcag gacctgggct gtggtgcaag cttgggtgtc atctcagaca acctgctggt
     3541 gactggcggc cagggctgtg tctccttttg ggacctaaac tacggggacc tgttacagac
     3601 agtctacctg gggaagaaca gtgaggccca gcctgcccgc cagatcctgg tgctggacaa
     3661 cgctgccatt gtctgcaact ttggcagtga gctcagcctg gtgtatgtgc cctctgtgct
     3721 ggagaagctg gactgagcgc agggcctcct tgcccaggca ggaggctggg gtgctgtgtg
     3781 ggggccaatg cactgaacct ggacttgggg gaaagagccg agtatcttcc agccgctgcc
     3841 tcctgactgt aataatatta aactttttta aaaaaccata tcatcatctg tcaggcactt
     3901 tgggagcta
//
