LOCUS       XM_047427658            5835 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens SET binding factor 2 (SBF2), transcript
            variant X4, mRNA.
ACCESSION   XM_047427658
VERSION     XM_047427658.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000011.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5835
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
     gene            1..5835
                     /gene="SBF2"
                     /gene_synonym="CMT4B2; DENND7B; MTMR13"
                     /note="SET binding factor 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 5 ESTs, 232 long SRA reads, and 97% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     31 samples with support for all annotated introns"
                     /db_xref="GeneID:81846"
                     /db_xref="HGNC:HGNC:2135"
                     /db_xref="MIM:607697"
     CDS             151..3501
                     /gene="SBF2"
                     /gene_synonym="CMT4B2; DENND7B; MTMR13"
                     /codon_start=1
                     /product="myotubularin-related protein 13 isoform X4"
                     /protein_id="XP_047283614.1"
                     /db_xref="GeneID:81846"
                     /db_xref="HGNC:HGNC:2135"
                     /db_xref="MIM:607697"
                     /translation="MARLADYFIVVGYDHEKPGSGEGLGKIIQRFPQKDWDDTPFPQG
                     IELFCQPGGWQLSRERKQPTFFVVVLTDIDSDRHYCSCLTFYEAEINLQGTKKEEIEG
                     EAKVSGLIQPAEVFAPKSLVLVSRLYYPEIFRACLGLIYTVYVDSLNVSLESLIANLC
                     ACLVPAAGGSQKLFSLGAGDRQLIQTPLHDSLPITGTSVALLFQQLGIQNVLSLFCAV
                     LTENKVLFHSASFQRLSDACRALESLMFPLKYSYPYIPILPAQLLEVLSSPTPFIIGV
                     HSVFKTDVHELLDVIIADLDGGTIKIPECIHLSSLPEPLLHQTQSALSLILHPDLEVA
                     DHAFPPPRTALSHSKMLDKEVRAVFLRLFAQLFQGYRSCLQLIRIHAEPVIHFHKLVA
                     FEVERIKVEENNPVKMIKHVRELAEQLFKNENPNPHMAFQKVPRPTEGSHLRVHILPF
                     PEINEARVQELIQENVAKNQNAPPATRIEKKCVVPAGPPVVSIMDKVTTVFNSAQRLE
                     VVRNCISFIFENKILETEKTLPAALRALKGKAARQCLTDELGLHVQQNRAILDHQQFD
                     YIIRMMNCTLQDCSSLEEYNIAAALLPLTSAFYRKLAPGVSQFAYTCVQDHPIWTNQQ
                     FWETTFYNAVQEQVRSLYLSAKEDNHAPHLKQKDKLPDDHYQEKTAMDLAAEQLRLWP
                     TLSKSTQQELVQHEESTVFSQAIHFANLMVNLLVPLDTSKNKLLRTSAPGDWESGSNS
                     IVTNSIAGSVAESYDTESGFEDSENTDIANSVVRFITRFIDKVCTESGVTQDHIKSLH
                     CMIPGIVAMHIETLEAVHRESRRLPPIQKPKILRPALLPGEEIVCEGLRVLLDPDGRE
                     EATGGLLGGPQLLPAEGALFLTTYRILFRGTPHDQLVGEQTVVRSFPIASITKEKKIT
                     MQNQLQQNMQEGLQITSASFQLIKVAFDEEVSPEVVEIFKKQLMKFRYPQSIFSTFAF
                     AAGQTTPQIILPKQKEKNTSFRTFSKTIVKGAKRAGKMTIGRQYLLKKKTGTIVEERV
                     NRPGWNEDDDVSVSDESELPTSTTLKASEKSTMEQLVEKACFRDYQRLGLGTISGSSS
                     RSRPEYFRITASNRMYSLCRSPEIDKNA"
     polyA_site      5835
                     /gene="SBF2"
                     /gene_synonym="CMT4B2; DENND7B; MTMR13"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agagcgcgcc tcggttgtca aacatggctg aagcgctgcc gctgccgcta ctgccgctgc
       61 agggaaaatg ctgagccctc ccgggccggg tgggcggcgg cggcgagggc ggcgacgggg
      121 acccgcttcc cgagcgcggc ggcggcggcc atggcccggc tggctgacta cttcatcgtg
      181 gtaggctatg accacgagaa gccaggatca ggagaaggtc tggggaaaat aatccagaga
      241 tttccacaga aggactggga tgatacacct tttccacagg gaattgagtt gttttgtcag
      301 cctggcgggt ggcagctgtc cagagagagg aagcagccaa cgttctttgt ggttgtcctg
      361 acagacattg actcagatcg acattactgc tcatgcctaa ccttctatga ggcagagatc
      421 aatcttcagg gaacaaagaa ggaagagatt gaaggtgaag caaaagtgtc tggtttaatt
      481 cagcctgcag aagtgtttgc tcccaaaagc ctggtgttgg tatccagatt atattatcca
      541 gaaattttta gggcttgcct gggtttgatc tataccgtgt atgtggacag cctgaatgtc
      601 tccttggaaa gtctaattgc aaacctttgt gcctgccttg tcccagcggc tggagggtct
      661 cagaagctgt tttctttggg tgcaggagat agacagttga tccagactcc tttacatgat
      721 agtcttccta tcacgggcac tagtgtggct ctcctgttcc agcaattggg aattcaaaat
      781 gtcctcagcc tcttttgtgc agtcctcaca gaaaataagg ttctcttcca ttctgcaagt
      841 ttccagagac ttagtgatgc ttgtagagcc ctggaatctt taatgtttcc tcttaaatat
      901 agttatcctt atatccctat tctcccggct cagctactgg aagttctaag ttccccaacg
      961 cctttcatta ttggagtaca ttctgtcttt aaaactgatg tccatgaact tttagatgta
     1021 atcatagcag atttggatgg aggcactatt aaaattcccg aatgtattca cctctcttcc
     1081 ctcccagaac cacttctaca tcagactcaa tcagctcttt ctttgatttt acacccagat
     1141 ttggaagtag cagatcatgc ttttcctcct ccacgaacag ctttatccca ctcaaaaatg
     1201 ctggataaag aggtgcgagc cgttttcctt agattatttg cacaactctt ccaaggatat
     1261 agatcctgcc tgcaacttat aagaattcat gcagagccag taatacattt ccacaagttg
     1321 gtagcctttg aagtagagag aattaaagtt gaagaaaata acccagtgaa gatgataaag
     1381 catgtcaggg aacttgctga gcaactattc aaaaatgaga atccaaatcc tcatatggca
     1441 ttccagaaag ttccacggcc aacagaagga tcccatttgc gagttcatat tcttcctttc
     1501 ccagagatta atgaagcccg ggttcaggaa ttaatacagg aaaatgttgc taagaaccag
     1561 aatgcacctc ctgccacacg aatagaaaag aaatgtgttg tgccagcagg tccacctgtt
     1621 gtttcgataa tggacaaggt gacgacagtt ttcaacagtg cacaaagact agaagttgtc
     1681 agaaactgta tctcattcat atttgaaaat aaaattttgg aaactgaaaa gacccttcct
     1741 gctgcactca gagcccttaa aggaaaggca gcaagacagt gtctcactga tgaattgggt
     1801 ttgcatgtcc agcaaaaccg ggcaatatta gaccatcaac agtttgacta cataataagg
     1861 atgatgaatt gtactctaca ggattgttca agtttagaag aatacaacat tgccgcagca
     1921 ttactccctt tgaccagtgc tttctatagg aaacttgccc ctggagtcag ccagtttgct
     1981 tacacgtgtg tacaagacca ccccatttgg acaaatcagc aattttggga gacaaccttt
     2041 tacaatgcag tgcaggaaca ggttcgctcc ctttatctct cagccaagga agacaatcat
     2101 gccccgcatc tgaagcaaaa ggataagctt cctgatgacc attatcagga gaagacagca
     2161 atggacctgg cagctgagca actacgcctt tggcctaccc tgagcaagtc aactcagcaa
     2221 gagctagtgc aacatgagga aagcactgtc tttagtcagg ccattcactt tgcaaacctc
     2281 atggtgaacc tgctagttcc actcgacaca agtaaaaaca agctcctaag aacatcagcg
     2341 ccaggtgact gggagagcgg aagcaacagc attgtcacaa acagtattgc aggaagtgta
     2401 gctgagagct atgatacaga gagtgggttt gaagattcag agaatactga cattgccaat
     2461 tctgttgtgc ggttcattac ccgatttatt gacaaagttt gtacagagag tggagttact
     2521 caggatcaca tcaagagcct tcattgcatg ataccaggaa ttgtagctat gcacattgag
     2581 accctagaag cagtacatcg agaaagcaga agacttccgc ctattcagaa gcccaagatt
     2641 cttagacctg ctctgctgcc aggagaagaa attgtctgtg agggtcttcg agtcttgctg
     2701 gatcctgatg gaagagaaga agctactgga ggtcttcttg gaggccctca gctcctgcca
     2761 gcagaaggag ccttgttcct caccacatac agaattctct tcagaggaac accccatgat
     2821 cagttagtgg gtgagcagac agttgtgcgg agctttccca ttgcctccat caccaaggag
     2881 aagaagatta caatgcagaa ccagctacag cagaacatgc aagaaggact gcagatcaca
     2941 tcagcatctt ttcagttgat taaggtagca tttgatgaag aagtcagtcc agaagtagta
     3001 gagatcttta agaaacagct gatgaagttc cgttatcctc agtccatttt cagtaccttt
     3061 gcttttgctg ctggacaaac taccccacaa ataattttac caaaacagaa ggaaaagaac
     3121 acttcttttc gtaccttctc aaaaacaatt gtgaaaggtg ccaaaagggc agggaaaatg
     3181 acaattgggc ggcaatattt actgaagaag aagacaggga caattgtgga agaaagagta
     3241 aatcgtcctg gatggaatga agatgatgat gtatctgttt cagatgagag tgagctcccc
     3301 acaagtacca ccctgaaggc ctccgagaag tctacaatgg aacagttggt ggaaaaagct
     3361 tgtttcagag actatcagcg tttaggttta ggaaccataa gtggcagctc ttcccgttca
     3421 agacccgagt attttagaat tactgcctcc aacaggatgt attcactctg ccggagccct
     3481 gagatagata aaaatgcctg aaaataagaa caaggtctcc aggatacgag caagcatctc
     3541 attggcattc tcggaacaat taccttactg aaagtacctc tagtaggtga gaaggtgaaa
     3601 ggtaaagtac tcacccccta tgaatttctc ttgtctttct cttcccagtt tgcttctttt
     3661 ctagcatgac taaagataac ttgaagaaca ggattttccc agcccaatag aggacatgaa
     3721 agtcttttgt aggctgggga gccacaaact ctttctataa agggtcagtt ggtaaatatt
     3781 ttcagtttat gagccataga gtctcttgtt gcagctattc aactgtgccg caaaagcagc
     3841 cacagacagt aaggaaatga gtaggcatgg ccagttttgg cccacaggct ataatttgct
     3901 gacccaggtg taggcaaggc tttcttatgc ggtctaattg gaatgttttc aagggaatat
     3961 tacttaaagg atgtaaataa agaggcattt tcttttttca gttcttgtca tctctcactg
     4021 tttttcaaat atgttgagtc ttattccatg ctttactata tgtaaatata tattttctaa
     4081 aattacattt tcaccatcca caagtttagt cattttcatc tccaggtaag atttttcttt
     4141 gcatttataa attcctgctt aaacagctct gaaatcactt tgtaaattgt aagctttgta
     4201 catattttag aaagttatct taatgttact ttcaaccctg ttgctcttga agatagatat
     4261 gtcattttaa atggcaattt aagtttacaa atattaatat gaaacttcag aaacaagttg
     4321 ggaatatagt tttgagattg tggccaaata aacattttgc atgaagttct gaaaaattgg
     4381 cactctgagt atgcagtaat ttttctggaa ttctccgtca ttctaactaa attttctctg
     4441 aagatgagtc atgttgtcgg ggtgtgatgt cctgctgttt ggaaagtttg ctatcaaaat
     4501 tatgccagcc attgagaaaa cagactcatt tatcattcca atctgtcaga agtaaaataa
     4561 aattttaata gatgacttat tagaacactg gttataaagc atttatgatg gtaaaaagta
     4621 atatatatcc attaagttat tagcaggaag gaaatggaat aataaaaaat aatccaaaag
     4681 aaggcaagaa aggaaaaaaa aggggacata gaacaaatgg aataaataac aagtagtaag
     4741 atggtagatt taaattcaaa tatatccata attgcattaa ttattaattg actaaatgtt
     4801 ccaattcaaa gaaagagatc agggtttgct ttaaaaaaaa aaaaaaaaaa aaagtggctg
     4861 ggctcagtgg ctcacgcctg taatcccagc actttgggag gccgaggcag gcagatcacg
     4921 aggtcaagag atggagacca tcctggccaa catggtgaaa ccctgtgtct actaaaaata
     4981 caaaaattag ctgggcatgg tggcttgtgc ctgtagtccc agctacttgg gaggctgagg
     5041 caggagaatc acttgaaccc tggtggtgga ggttacagtg agccgaggtc aagctactgc
     5101 actccagcct ggtgacagag caacactccg tctccaaaaa aaaagctttc tgctgctttt
     5161 aagggacaaa tctaatatac aagtatataa aaaggtagaa agtaaaagga tagaaaaaat
     5221 ataccacgca aaactacctt taaaaaaagt tgttgtcact atatgaatat caaagtagac
     5281 tttaaaagca gtaagaaagg atggttgata atgacaaaag gtttatttta cacacagcaa
     5341 ttcattaaga tcaagtggag tttattgtag gaatagagta ctggtttcac atctgaaaat
     5401 cagtcagtgt aatttaccac attaacagaa ttaaaaagaa gtttattata taaagataag
     5461 cattttgcaa atgcaaagta cacttatgag ttttatttat gtaaatttat ttatgtaaat
     5521 tctgtatttt ttgtcacatt tgtgatcttt agaaaaaagc tctcagcaaa agagagtaag
     5581 aatgagctcc catgagtagc gccctgaagg cctcagagaa gtctacagtg gaacagtggg
     5641 tagctcctta atcttctgtc ttaaaaatcc tacacaggaa attacttatc ttagaaataa
     5701 ataaaatatt aaaagctttt tctctgaaat cctgacaagg atgcccatta tcaccatttc
     5761 tattcagtgt tgtactagag gtcttaggca gtgcaaagag actagaaaag taataaaagg
     5821 tataaaaatt gaaaa
//
