LOCUS       NM_001355283            2140 bp    mRNA    linear   PRI 07-APR-2024
DEFINITION  Homo sapiens ribosomal protein SA 2 (RPSA2), transcript variant 1,
            mRNA.
ACCESSION   NM_001355283 NR_003662
VERSION     NM_001355283.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Balasubramanian,S., Zheng,D., Liu,Y.J., Fang,G., Frankish,A.,
            Carriero,N., Robilotto,R., Cayting,P. and Gerstein,M.
  TITLE     Comparative analysis of processed ribosomal protein pseudogenes in
            four mammalian genomes
  JOURNAL   Genome Biol 10 (1), R2 (2009)
   PUBMED   19123937
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            KF495804.1 and AC139769.1.
            
            On Oct 11, 2020 this sequence version replaced NM_001355283.2.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC071971.1, SRR3476690.1033750.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1965299, SAMEA1968189
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000484897.4/ ENSP00000509526.1
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-131               KF495804.1         234-364             c
            132-245             AC139769.1         64027-64140
            246-341             AC139769.1         64920-65015
            342-2140            AC139769.1         83271-85069
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19p12"
     gene            1..2140
                     /gene="RPSA2"
                     /gene_synonym="37LRP; 67LR; LamR; LBP/p40; LRP/LR;
                     RPSAP58; RPSA_30_1642"
                     /note="ribosomal protein SA 2"
                     /db_xref="GeneID:388524"
                     /db_xref="HGNC:HGNC:36809"
     exon            1..131
                     /gene="RPSA2"
                     /gene_synonym="37LRP; 67LR; LamR; LBP/p40; LRP/LR;
                     RPSAP58; RPSA_30_1642"
                     /inference="alignment:Splign:2.1.0"
     exon            132..245
                     /gene="RPSA2"
                     /gene_synonym="37LRP; 67LR; LamR; LBP/p40; LRP/LR;
                     RPSAP58; RPSA_30_1642"
                     /inference="alignment:Splign:2.1.0"
     exon            246..341
                     /gene="RPSA2"
                     /gene_synonym="37LRP; 67LR; LamR; LBP/p40; LRP/LR;
                     RPSAP58; RPSA_30_1642"
                     /inference="alignment:Splign:2.1.0"
     exon            342..2140
                     /gene="RPSA2"
                     /gene_synonym="37LRP; 67LR; LamR; LBP/p40; LRP/LR;
                     RPSAP58; RPSA_30_1642"
                     /inference="alignment:Splign:2.1.0"
     CDS             434..1321
                     /gene="RPSA2"
                     /gene_synonym="37LRP; 67LR; LamR; LBP/p40; LRP/LR;
                     RPSAP58; RPSA_30_1642"
                     /note="ribosomal protein SA pseudogene 58; laminin
                     receptor 1; 67 kDa laminin receptor; 40S ribosomal protein
                     SA2; 37/67 kDa laminin receptor; 37 kDa laminin receptor;
                     laminin-binding protein precursor p40"
                     /codon_start=1
                     /product="small ribosomal subunit protein uS2B"
                     /protein_id="NP_001342212.1"
                     /db_xref="CCDS:CCDS92575.1"
                     /db_xref="GeneID:388524"
                     /db_xref="HGNC:HGNC:36809"
                     /translation="MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEHYIYKRKSD
                     GIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGR
                     FTPGTFTNQIQAAFWEPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIA
                     IPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAA
                     EKAVTKEEFQGEWTAPSPEFTATQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDW
                     SAAPTAQATEWVGATTDWS"
     regulatory      2118..2123
                     /regulatory_class="polyA_signal_sequence"
                     /gene="RPSA2"
                     /gene_synonym="37LRP; 67LR; LamR; LBP/p40; LRP/LR;
                     RPSAP58; RPSA_30_1642"
                     /note="hexamer: ATTAAA"
     polyA_site      2140
                     /gene="RPSA2"
                     /gene_synonym="37LRP; 67LR; LamR; LBP/p40; LRP/LR;
                     RPSAP58; RPSA_30_1642"
                     /note="major polyA site"
ORIGIN      
        1 agagtttggg atcggtctct tctgttccgc gtcctccacc tcggtagccc ctggtgactc
       61 tgttacagcc tctgttgacc tatgatctgc agggagacgc acagccagga catcctggaa
      121 cctgggaaag gggactcttg acgtttaggt atgtggccat agaattctct ctggaggagt
      181 agcagtgcct ggacactgca cagcagaatt tatagaggaa tgttatgaaa acctggcctt
      241 cctgggtatt actgtctcta agccagacct gatcacctat ctggagcgag aaaaagagcc
      301 ctggaatatg aagtgacatg agatggtgga tgaaccccca gtaacaatgc tgcagctttt
      361 ccgcgctacc tgcagagggg tccatacggc gttgttctgg attcccgtcg taacttaaag
      421 ggaaactttc acaatgtccg gagcccttga tgtcctgcaa atgaaggagg aggatgtcct
      481 taagttcctt gcagcaggaa cccacttagg tggcaccaat cttgacttcc agatggaaca
      541 ctacatctat aaaaggaaaa gtgatggcat ctatatcata aatctcaaga ggacctggga
      601 gaagcttctg ctggcagctc gtgctattgt tgccattgaa aaccctgctg atgtcagtgt
      661 tatatcctcc aggaatactg gccagagggc tgtgctgaag tttgctgctg ccactggagc
      721 cactccaatt gctggccgct tcactcctgg aaccttcact aaccagatcc aggcagcctt
      781 ctgggagcca cggcttcttg tggttactga ccccagggct gaccaccagc ctctcacgga
      841 ggcatcttat gttaacctac ctaccattgc gctgtgtaac acagattctc ctctgcgcta
      901 tgtggacatt gccatcccat gcaacaacaa gggagctcac tcagtgggtt tgatgtggtg
      961 gatgctggct cgggaagttc tgcgcatgcg tggcaccatt tcccgtgaac acccatggga
     1021 ggtcatgcct gatctgtact tctacagaga tcctgaagag attgaaaaag aagagcaggc
     1081 tgctgctgag aaggcagtga ccaaggagga atttcagggt gaatggactg ctccctctcc
     1141 tgagttcact gctactcagc ctgaggttgc agactggtct gaaggtgtac aggtgccctc
     1201 tgtgcctatt cagcaattcc ctactgaaga ctggagcgct cagcctgcca cggaagactg
     1261 gtctgcagct cccactgctc aggccactga atgggtagga gcaaccactg actggtctta
     1321 agctgttctt gcataggctc ttaagcagca tggaaaaatg gttgatggaa aataaacatc
     1381 agtttctaaa aaaaaaaaaa aaaaaaatgc tgcaataatt atgagtctat aaatgactac
     1441 ttatatgacc atatatgtga aagtttatat atgtgctgca ttctatttta ttagtctact
     1501 ttttcacctt tatactcata tcaaattgtt taatttggta gctttgtaat gtgttttgaa
     1561 tcaggcactt taatgcctgc agcattcttt ctttcttttt ttttttttaa tattgttggg
     1621 tagtttgttt ttcttttgag tctctgtata cttttgaggt tggtgtttct atttcttcaa
     1681 aaatgcaatg agaaatttga aaaatattgc attaaatctg tagattgcat tgagcaggat
     1741 ggactctgca atattaagta tttcaacctt tgtgtaagag cacactcaag agtgtgttgt
     1801 ttagtttcta tatatttgta aatttttcag tttttttttt ttgcttttat cgttgtatat
     1861 tctcattcca ttttggtcat agaatgtagt tcatagaaat ttacttttaa aaaatttgat
     1921 aagacttcct ttttgtccta agatgtggtc tttcaaggga aatgttgtat gagctattga
     1981 gaagggtgtg tattctgatg ttgttgagga gtgttctcca taactctgtt tggaataatt
     2041 gttttatact gcctttaagt agtctgttct tttattaaca ttctttcttg ttttagtttt
     2101 attacaaaaa gtgtggtatt aaaatatatt gttctaatta
//
