LOCUS       XM_006723852            2179 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens ribophorin II (RPN2), transcript variant
            X2, mRNA.
ACCESSION   XM_006723852
VERSION     XM_006723852.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000020.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_006723852.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="20"
     gene            1..2179
                     /gene="RPN2"
                     /gene_synonym="RIBIIR; RPN-II; RPNII; SWP1"
                     /note="ribophorin II; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 327 ESTs, 10893 long SRA
                     reads, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 121 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:6185"
                     /db_xref="HGNC:HGNC:10382"
                     /db_xref="MIM:180490"
     CDS             28..1875
                     /gene="RPN2"
                     /gene_synonym="RIBIIR; RPN-II; RPNII; SWP1"
                     /codon_start=1
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit 2 isoform X2"
                     /protein_id="XP_006723915.1"
                     /db_xref="GeneID:6185"
                     /db_xref="HGNC:HGNC:10382"
                     /db_xref="MIM:180490"
                     /translation="MAPPGSSTVFLLALTIIASTWALTPTHYLTKHDVERLKASLDRP
                     FTNLESAFYSIVGLSSLGAQVPDAKKACTYIRSNLDPSNVDSLFYAAQASQALSGCEI
                     SISNETKDLLLAAVSEDSSVTQIYHAVAALSGFGLPLASQEALSALTARLSKEETVLA
                     RVWSTVLESRSLFSKRTVQALQTASHLSQQADLRSIVEEIEDLVARLDELGGVYLQFE
                     EGLETTALFVAATYKLMDHVGTEPSIKEDQVIQLMNAIFSKKNFESLSEAFSVASAAA
                     VLSHNRYHVPVVVVPEGSASDTHEQAILRLQVTNVLSQPLTQATVKLEHAKSVASRAT
                     VLQKTSFTPVGDVFELNFMNVKFSSGYYDFLVEVEGDNRYIANTVELRVKISTEVGIT
                     NVDLSTVDKDQSIAPKTTRVTYPAKAKGTFIADSHQNFALFFQLVDVNTGAELTPHQT
                     FVRLHNQKTGQEVVFVAEPDNKNVYKFELDTSERKIEFDSASGTYTLYLIIGDATLKN
                     PILWNVADVVIKFPEEEAPSTVLSQNLFTPKQEIQWIRIGANVSNFTFAPSTIIFHLG
                     HAAMLGLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRMLAQQAVKRTAH"
ORIGIN      
        1 ggactccggc gggacctgct cggaggaatg gcgccgccgg gttcaagcac tgtcttcctg
       61 ttggccctga caatcatagc cagcacctgg gctctgacgc ccactcacta cctcaccaag
      121 catgacgtgg agagactaaa agcctcgctg gatcgccctt tcacaaattt ggaatctgcc
      181 ttctactcca tcgtgggact cagcagcctt ggtgctcagg tgccagatgc aaagaaagca
      241 tgtacctaca tcagatctaa ccttgatccc agcaatgtgg attccctctt ctacgctgcc
      301 caggccagcc aggccctctc aggatgtgag atctctattt caaatgagac caaagatctg
      361 cttctggcag ctgtcagtga ggactcatct gttacccaga tctaccatgc agttgcagct
      421 ctaagtggct ttggccttcc cttggcatcc caagaagcac tcagtgccct tactgctcgt
      481 ctcagcaagg aggagactgt gctggcgagg gtgtggagca ccgttctgga atcccgttcg
      541 ttgtttagca agagaacagt ccaggctctg cagacagcat cccacctgtc ccagcaggct
      601 gacctgagga gcatcgtgga ggagattgag gaccttgttg ctcgcctgga tgaactcggg
      661 ggcgtgtatc tccagtttga agaaggactg gaaacaacag cgttatttgt ggctgccacc
      721 tacaagctca tggatcatgt ggggactgag ccatccatta aggaggatca ggtcatccag
      781 ctgatgaacg cgatcttcag caagaagaac tttgagtccc tctccgaagc cttcagcgtg
      841 gcctctgcag ctgctgtgct ctcgcataat cgctaccacg tgccagttgt ggttgtgcct
      901 gagggctctg cttccgacac tcatgaacag gctatcttgc ggttgcaagt caccaatgtt
      961 ctgtctcagc ctctgactca ggccactgtt aaactagaac atgctaaatc tgttgcttcc
     1021 agagccactg tcctccagaa gacatccttc acccctgtag gggatgtttt tgaactaaat
     1081 ttcatgaacg tcaaattttc cagtggttat tatgacttcc ttgtcgaagt tgaaggtgac
     1141 aaccggtata ttgcaaatac cgtagagctc agagtcaaga tctccactga agttggcatc
     1201 acaaatgttg atctttccac cgtggataag gatcagagca ttgcacccaa aactacccgg
     1261 gtgacatacc cagccaaagc caagggcaca ttcatcgcag acagccacca gaacttcgcc
     1321 ttgttcttcc agctggtaga tgtgaacact ggtgctgaac tcactcctca ccagacattt
     1381 gtccgactcc ataaccagaa gactggccag gaagtggtgt ttgttgccga gccagacaac
     1441 aagaacgtgt acaagtttga actggatacc tctgaaagaa agattgaatt tgactctgcc
     1501 tctggcacct acactctcta cttaatcatt ggagatgcca ctttgaagaa cccaatcctc
     1561 tggaatgtgg ctgatgtggt catcaagttc cctgaggaag aagctccctc gactgtcttg
     1621 tcccagaacc ttttcactcc aaaacaggaa attcagtgga tccggattgg tgccaatgtc
     1681 tccaacttca cttttgctcc tagcacgatt atatttcacc tgggacatgc tgctatgctg
     1741 ggactcatgt atgtctactg gactcagctc aacatgttcc agaccttgaa gtacctggcc
     1801 atcctgggca gtgtgacgtt tctggctggc aatcggatgc tggcccagca ggcagtcaag
     1861 agaacagcac attagttcca gaagaaagat ggaaattctg aaaactgaat gtcaagaaaa
     1921 ggagtcaaga acaattcaca gtatgagaag aaaaatggaa aaaaaaaact ttatttaaaa
     1981 aagaaaaaag tccagattgt agttatactt ttgcttgttt ttcagtttcc ccaacacaca
     2041 gcagatacct ggtgagctca gatagtctct ttctctgaca ctgtgtaaga agctgtgaat
     2101 attcctaact tacccagatg ttgcttttga aaagttgaaa tgtgtaattg ttttggaata
     2161 aagagggtaa caataggaa
//
