LOCUS       XM_011536981            2446 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens RPGR interacting protein 1 (RPGRIP1),
            transcript variant X6, mRNA.
ACCESSION   XM_011536981
VERSION     XM_011536981.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000014.9) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="14"
     gene            1..2446
                     /gene="RPGRIP1"
                     /gene_synonym="CORD13; LCA6; RGI1; RGRIP; RPGRIP;
                     RPGRIP1d"
                     /note="RPGR interacting protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 97
                     ESTs, 2 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 7 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:57096"
                     /db_xref="HGNC:HGNC:13436"
                     /db_xref="MIM:605446"
     CDS             67..2361
                     /gene="RPGRIP1"
                     /gene_synonym="CORD13; LCA6; RGI1; RGRIP; RPGRIP;
                     RPGRIP1d"
                     /codon_start=1
                     /product="X-linked retinitis pigmentosa GTPase
                     regulator-interacting protein 1 isoform X6"
                     /protein_id="XP_011535283.1"
                     /db_xref="GeneID:57096"
                     /db_xref="HGNC:HGNC:13436"
                     /db_xref="MIM:605446"
                     /translation="MLKLDNKDVISHPLGYPSESLLSIASMLDSSDSSSQPHWSNELI
                     AEQLQQQVSQLQDQLDAELEDKRKVLLELSREKAQNEDLKLEVTNILQKHKQEVELLQ
                     NAATISQPPDRQSEPATHPAVLQENTQIEPSEPKNQEEKKLSQVLNELQVSHAETTLE
                     LEKTRDMLILQRKINVCYQEELEAMMTKADNDNRDHKEKLERLTRLLDLKNNRIKQLE
                     GILRSHDLPTSEQLKDVAYGTRPLSLCLETLPAHGDEDKVDISLLHQGENLFELHIHQ
                     AFLTSAALAQAGDTQPTTFCTYSFYDFETHCTPLSVGPQPLYDFTSQYVMETDSLFLH
                     YLQEASARLDIHQAMASEHSTLAAGWICFDRVLETVEKVHGLATLIGDFNLTDPAEKP
                     NGSIQVQLDWKFPYIPPESFLKPEAQTKGKDTKDSSKISSEEEKASFPSQDQMASPEV
                     PIEAGQYRSKRKPPHGGERKEKEHQVVSYSRRKHGKRIGVQGKNRMEYLSLNILNGNT
                     PEQVNYTEWKFSETNSFIGDGFKNQHEEEEMTLSHSALKQKEPLHPVNADKESSEQGS
                     EVSEAQTTDSDDVIVPPMSQKYPKADSEKMCIEIVSLAFYPEAEVMSDENIKQVYVEY
                     KFYDLPLSETETPVSLRKPRAGEEIHFHFSKVIDLDPQEQQGRRRFLFDMLNGQDPDQ
                     GHLKFTVVSDPLDEEKKECEEVGYAYLQLWQILESGRDILEQELDIVSPEDLATPIGR
                     LKVSLQAAAVLHAIYKEMTEDLFS"
ORIGIN      
        1 agttatgaat aaagcaaggg cagaaaaaaa catgtagggg agagaatgag gaactaggtc
       61 caggagatgc tgaaactgga taataaagac gtcatatcac accccttggg gtatccatct
      121 gagagcttgc tttccattgc cagcatgctg gacagcagtg acagctccag tcagccccac
      181 tggagcaacg agctcatagc ggaacagcta cagcagcaag tctctcagct gcaggatcag
      241 ctggatgctg agctggagga caagagaaaa gttttacttg agctgtccag ggagaaagcc
      301 caaaatgagg atctgaagct tgaagtcacc aacatacttc agaagcataa acaggaagta
      361 gagctcctcc aaaatgcagc cacaatttcc caacctcctg acaggcaatc tgaaccagcc
      421 actcacccag ctgtattgca agagaacact cagatcgagc caagtgaacc caaaaaccaa
      481 gaagaaaaga aactgtccca ggtgctaaat gagttgcaag tatcacacgc agagaccaca
      541 ttggaactag aaaagaccag ggacatgctt attctgcagc gcaaaatcaa cgtgtgttat
      601 caggaggaac tggaggcaat gatgacaaaa gctgacaatg ataatagaga tcacaaagaa
      661 aagctggaga ggttgactcg actactagac ctcaagaata accgtatcaa gcagctggaa
      721 ggtattttaa gaagccatga ccttccaaca tctgaacagc tcaaagatgt tgcttatggc
      781 acccgaccgt tgtcgttatg tttggaaaca ctgccagccc atggagatga ggataaagtg
      841 gatatttctc tgctgcatca gggtgagaat ctttttgaac tgcacatcca ccaggccttc
      901 ctgacatctg ccgccctagc tcaggctgga gatacccaac ctaccacttt ctgcacctat
      961 tccttctatg actttgaaac ccactgtacc ccattatctg tggggccaca gcccctctat
     1021 gacttcacct cccagtatgt gatggagaca gattcgcttt tcttacacta ccttcaagag
     1081 gcttcagccc ggcttgacat acaccaggcc atggccagtg aacacagcac tcttgctgca
     1141 ggatggattt gctttgacag ggtgctagag actgtggaga aagtccatgg cttggccaca
     1201 ctgattggtg attttaacct cactgaccct gcagagaaac ccaacggatc tattcaagtg
     1261 caactggatt ggaagtttcc ctacataccc cctgagagct tcctgaaacc agaagctcag
     1321 actaagggga aggataccaa ggacagttca aagatctcat ctgaagagga aaaggcttca
     1381 tttccttccc aggatcagat ggcatctcct gaggttccca ttgaagctgg ccagtatcga
     1441 tctaagagaa aacctcctca tgggggagaa agaaaggaga aggagcacca ggttgtgagc
     1501 tactcaagaa gaaaacatgg caaaagaata ggtgttcaag gaaagaatag aatggagtat
     1561 cttagcctta acatcttaaa tggaaataca ccagagcagg tgaattacac tgagtggaag
     1621 ttctcagaga ctaacagctt cataggtgat ggctttaaaa atcagcacga ggaagaggaa
     1681 atgacattat cccattcagc actgaaacag aaggaacctc tacatcctgt aaatgcagac
     1741 aaagaatcct ctgaacaagg ttctgaagtc agtgaagcac aaactaccga cagtgatgat
     1801 gtcatagtgc cacccatgtc tcagaaatat cctaaggcag attcagagaa gatgtgcatt
     1861 gaaattgtct ccctggcctt ctacccagag gcagaagtga tgtctgatga gaacataaaa
     1921 caggtgtatg tggagtacaa attctacgac ctacccttgt cggagacaga gactccagtg
     1981 tccctaagga agcctagggc aggagaagaa atccactttc actttagcaa ggtaatagac
     2041 ctggacccac aggagcagca aggccgaagg cggtttctgt tcgacatgct gaatggacaa
     2101 gatcctgatc aaggacattt aaagtttaca gtggtaagtg atcctctgga tgaagaaaag
     2161 aaagaatgtg aagaagtggg atatgcatat cttcaactgt ggcagatcct ggagtcagga
     2221 agagatattc tagagcaaga gctagacatt gttagccctg aagatctggc taccccaata
     2281 ggaaggctga aggtttccct tcaagcagct gctgtcctcc atgctattta caaggagatg
     2341 actgaagatt tgttttcatg aaggaacaag tgctattcca atctaaaagt ctctgaggga
     2401 accatagtaa aaagtctctt ataaagttag cttgctataa catgaa
//
