LOCUS       XM_047442331            2277 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens retinitis pigmentosa GTPase regulator
            (RPGR), transcript variant X3, mRNA.
ACCESSION   XM_047442331
VERSION     XM_047442331.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000023.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
     gene            1..2277
                     /gene="RPGR"
                     /gene_synonym="COD1; CORDX1; CRD; orf15; PCDX; RP15; RP3;
                     XLRP3"
                     /note="retinitis pigmentosa GTPase regulator; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 162 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 25 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:6103"
                     /db_xref="HGNC:HGNC:10295"
                     /db_xref="MIM:312610"
     CDS             147..1814
                     /gene="RPGR"
                     /gene_synonym="COD1; CORDX1; CRD; orf15; PCDX; RP15; RP3;
                     XLRP3"
                     /codon_start=1
                     /product="X-linked retinitis pigmentosa GTPase regulator
                     isoform X3"
                     /protein_id="XP_047298287.1"
                     /db_xref="GeneID:6103"
                     /db_xref="HGNC:HGNC:10295"
                     /db_xref="MIM:312610"
                     /translation="MQPEEPDYLLDEMTKEAEIDNSSTVESLGETTDILNMTHIMSLN
                     SNEKSLKLSPVQKQKKQQTIGELTQDTALTENDDSDEYEEMSEMKEGKACKQHVSQGI
                     FMTQPATTIEAFSDEEVGNDTGQVGPQADTDGEGLQKEVYRHENNNGVDQLDAKEIEK
                     ESDGGHSQKESEAEEIDSEKETKLAEIAGMKDLREREKSTKKMSPFFGNLPDRGMNTE
                     SEENKDFVKKRESCKQDVIFDSERESVEKPDSYMEGASESQQGIADGFQQPEAIEFSS
                     GEKEDDEVETDQNIRYGRKLIEQGNEKETKPIISKSMAKYDFKCDRLSEIPEEKEGAE
                     DSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEDHEFSKTEELKLEDVDE
                     EINAENVESKKKTVGDDESVPTGYHSKTEGAERTNDDSSAETIEKKEKANLEERAICE
                     YNENPKGYMLDDADSSSLEILENSETTPSKDMKKTKKIFLFKRVPSINQKIVKNNNEP
                     LPEIKSIGDQIILKSDNKDADQNHMSQNHQNIPPTNTERRSKSCTIL"
ORIGIN      
        1 gtggcgactt ttctgccgta tagcagttta acctcaggaa atgtactgca gaggactcta
       61 tcagcacgta tgcggcgaag agagaggtct ttccacgatg ttctgagaga aacctccaag
      121 agagtgtctt atctgaacag gacctcatgc agccagagga accagattat ttgctagatg
      181 aaatgaccaa agaagcagag atagataatt cttcaactgt agaaagcctt ggagaaacta
      241 ctgatatctt aaacatgaca cacatcatga gcctgaattc caatgaaaag tcattaaaat
      301 tatcaccagt tcagaaacaa aagaaacaac aaacaattgg ggaactgacg caggatacag
      361 ctcttactga aaacgatgat agtgatgaat atgaagaaat gtcagaaatg aaagaaggga
      421 aagcatgtaa acaacatgtg tcacaaggga ttttcatgac gcagccagct acgactatcg
      481 aagcattttc agatgaggaa gtaggtaatg acacaggcca ggtgggacct caggctgaca
      541 ctgatggaga gggtttacaa aaagaggtat atagacatga aaataataat ggtgttgatc
      601 aacttgatgc taaggaaata gaaaaggaaa gtgatggagg acacagtcag aaggaatcag
      661 aagcagaaga aatagacagt gagaaggaaa ctaaactggc agaaatagca ggtatgaagg
      721 atttaagaga aagggaaaag agtacaaaaa agatgagtcc tttctttggc aacttaccag
      781 atagaggtat gaatactgag agtgaagaaa ataaagattt tgttaagaaa agggaaagtt
      841 gcaagcaaga tgtgatcttt gacagtgaaa gagaatcagt agaaaagcca gacagttaca
      901 tggaaggtgc aagtgagagt caacagggta tagctgatgg attccagcag cctgaggcaa
      961 tagaatttag tagtggagag aaagaggatg atgaagtgga aactgaccaa aacatacggt
     1021 atggcaggaa attgattgaa caaggaaatg aaaaagagac taaacccata atatccaaat
     1081 ccatggcaaa gtatgatttt aaatgtgatc gcttgtcaga gatcccagag gagaaggaag
     1141 gagcagagga ttcaaaagga aatggaatag aggagcaaga ggtagaagca aatgaggaaa
     1201 atgtgaaggt gcatggagga agaaaggaga aaacagagat cctatcagat gaccttacag
     1261 acaaagcaga ggatcatgaa ttttctaaaa ctgaggaact aaaactagaa gatgtggatg
     1321 aggaaattaa tgctgaaaat gtggaaagca agaagaaaac tgtgggagat gatgaaagtg
     1381 ttcctacagg ttatcacagt aaaacagaag gagcagaaag aaccaatgat gatagctcag
     1441 ctgaaactat tgaaaagaaa gaaaaagcca acctagagga acgggccatt tgtgagtaca
     1501 atgaaaaccc aaaaggatac atgcttgatg atgcagatag cagttcatta gaaatcctag
     1561 aaaacagtga aacaacacca agcaaagaca tgaaaaaaac aaagaagatt tttctgttca
     1621 aaagagtccc ctcaataaat caaaagattg tcaagaataa caatgagccg ctcccagaga
     1681 taaaatccat aggagaccag atcattttaa aaagtgataa taaagatgcc gaccagaacc
     1741 acatgagtca gaatcatcag aatatcccac caacaaatac agagagaaga tcaaaatcct
     1801 gtacaatact ataaatatat atttatgttt tcacagtcac caagtgtatt gtaatgtata
     1861 cttgaaaaat gttataactt atgaagtaaa gtttctgata gtagtcttta aaagatataa
     1921 gacttaatat gttttattca gcttctataa gtgtgaccag ttttgatatt tatttatgct
     1981 aatattttta acaagtcatt tcaaaatatg tgtatctcaa attctcccta aagtgttgtg
     2041 gccttaactg ttcagtattg caataaaaaa tatattttta tatgtggaaa attgaaataa
     2101 gatatttcct agtttttact aaacaatttt acttctttat aattttataa ggcaatattt
     2161 gcaatcttac gacactgtaa cagtttttga tgtatttaca atttttacaa aactgaggta
     2221 aaattgttta taatgaacat attttaataa actatatctg gtcagttcca ctgttaa
//
