LOCUS       XM_011515468            1146 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens RP9 pre-mRNA splicing factor (RP9),
            transcript variant X1, mRNA.
ACCESSION   XM_011515468
VERSION     XM_011515468.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000007.14) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011515468.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
     gene            1..1146
                     /gene="RP9"
                     /gene_synonym="PAP-1; PAP1"
                     /note="RP9 pre-mRNA splicing factor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 27
                     ESTs, 124 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     13 samples with support for all annotated introns"
                     /db_xref="GeneID:6100"
                     /db_xref="HGNC:HGNC:10288"
                     /db_xref="MIM:607331"
     CDS             146..709
                     /gene="RP9"
                     /gene_synonym="PAP-1; PAP1"
                     /codon_start=1
                     /product="retinitis pigmentosa 9 protein isoform X1"
                     /protein_id="XP_011513770.1"
                     /db_xref="GeneID:6100"
                     /db_xref="HGNC:HGNC:10288"
                     /db_xref="MIM:607331"
                     /translation="MAGAAQHREEKHSALLSYEKPPPGLIKEDETKPEDCIPDVPGNE
                     HAREFLAHAPTKGLWMPLGKEVKVMQCWRCKRYGHRTGDKECPFFIKGNQKLEQFRVA
                     HEDPMYDIIRDNKRHEKDVRIQQLKQLLEDSTSDEDRSSSSSSEGKEKHKKKKKKEKH
                     KKRKKEKKKKKKRKHKSSKSNEGSDSE"
ORIGIN      
        1 ctctttgagt gcacaaacac ctcgccttca gaatttcctt cccatcttgc tgcctgtccc
       61 atctggagac ttgcgtgctc agcattctgg gtctcctctg ggttcagtcc ctggatggaa
      121 ataaggaagg cctggccagt cttagatggc aggtgccgct cagcacaggg aggagaagca
      181 ttctgctctt ctcagttacg aaaaacctcc tcctgggctt atcaaggaag atgagactaa
      241 gccagaagat tgcataccag atgtaccagg caatgaacac gccagggaat ttctggctca
      301 tgcaccaact aaaggacttt ggatgccact ggggaaagaa gtcaaagtta tgcagtgttg
      361 gcgttgcaaa cgctatggtc accgaacggg tgacaaagaa tgccctttct ttatcaaagg
      421 caaccaaaag ttagagcagt tcagagtggc acatgaagat cccatgtatg acatcatacg
      481 agacaataaa cgacatgaaa aggacgtaag gatacagcag ttaaaacagt tactggagga
      541 ttctacctca gatgaagata ggagcagctc cagttcctct gaaggtaaag agaaacacaa
      601 gaaaaagaag aagaaagaaa agcataagaa aaggaagaaa gaaaagaaaa agaagaaaaa
      661 acggaagcac aaatcttcca agtcaaatga gggttctgac tcagagtgac aaggatgtga
      721 cttgttcaac attctcttct caaacactga ccaaggaaca gaggaagatg cagtcagaga
      781 aagcagcagg atagagacgc cgagagagga gtatatgtgg gtcacagcag tgagctccca
      841 cccgccttgc agtgaagatg tgaccccagg agagggagtg tctccttcca ggtgctagct
      901 ctggacagca gctgatttta ggcaggaaag tttcttcatc gttgtcctcc ctgctggtca
      961 catgagttta cgattccttt gaagtgtctc ccacagggtg gcaggactgg gagaatctct
     1021 gaggcgtgtc ttccaggccc tcccacagct tgtgccctcc acagtgtgga ctcaggtccc
     1081 atagacatca ggctggagtc ttctctgttg ttgagaataa taaaagctca ttatttattt
     1141 tttaaa
//
