LOCUS       XM_047422071            5882 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens RP1 axonemal microtubule associated (RP1),
            transcript variant X3, mRNA.
ACCESSION   XM_047422071
VERSION     XM_047422071.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000008.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5882
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="8"
     gene            1..5882
                     /gene="RP1"
                     /gene_synonym="DCDC4A; ORP1"
                     /note="RP1 axonemal microtubule associated; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 5 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:6101"
                     /db_xref="HGNC:HGNC:10263"
                     /db_xref="MIM:603937"
     CDS             322..4590
                     /gene="RP1"
                     /gene_synonym="DCDC4A; ORP1"
                     /codon_start=1
                     /product="oxygen-regulated protein 1 isoform X3"
                     /protein_id="XP_047278027.1"
                     /db_xref="GeneID:6101"
                     /db_xref="HGNC:HGNC:10263"
                     /db_xref="MIM:603937"
                     /translation="MVQVSAKMSDTPSTGFSIIHPTSSEGQVPPPRHLSLTHPVVAKR
                     ISFYKSGDPQFGGVRVVVNPRSFKSFDALLDNLSRKVPLPFGVRNISTPRGRHSITRL
                     EELEDGESYLCSHGRKVQPVDLDKARRRPRPWLSSRAISAHSPPHPVAVAAPGMPRPP
                     RSLVVFRNGDPKTRRAVLLSRRVTQSFEAFLQHLTEVMQRPVVKLYATDGRRVPSLQA
                     VILSSGAVVAAGREPFKPGNYDIQKYLLPARLPGISQRVYPKGNAKSESRKSSNWKVF
                     IITSDLPDAGTSSQIYIILYGQHRSSAPIYLYGTDGARFQVGHEDIFTITVGDIGALF
                     KIRIGHTNSGSSPSWHCKEIQLHNMNSGKQFYVPVQRWLARDQEDGEICREFPLLSKG
                     QPVLPVTIYEVNVATGELWNAGTVANVYISIHGEKGDTGSRQLFRSKSSFNFLRGQTD
                     TFFLEAVHLGDLCKIVIGHDGLGPGNGWFLDDVVIKDPTTNYEYAFFCHRWLDQGEDD
                     CKIVRELYARDNSIFSASRYHVYTFPGKLFYDDWRKHDTSEINCPLFIFSGQKLELKR
                     KETWTAESWKFTKGNTLQFYNKLTGGFVRLHPDGTVDAIGEKTDKYGVFDVIFNKRNI
                     CIFQSHEMRHLSLALDNGIVTGMVSGEATTELRVLYQPNRCALLESALVPGHTVVFDR
                     HGKIADASSAGYANLSKEFVIFVKGVFLNSAVVLLATSLCQALCLQPDGSCTGVGSQS
                     EKSYWKVHKISSGICMFESVKNAQMYLRIKDGRCDGTGTGDVDCHFKIKKNLKNASIS
                     LESTKSPGLFVGLQSDGQAKPMIYTKDENVCFYPQVIQFGRENPMGMSATPSQEEEKI
                     HESKKQKKIPPESEARSPLPSSTAKIRHFQSSETLLSEDEWKVLVLTGNTGTQANVTL
                     WVYGDKGVTGPISLRKDSSEQLFLPGHEDEFQVEIRNTGNIYKIRIGHDGTSEQPEWN
                     LQRVTMQHMKSKKILDFAANVWLSRIQADGDVVCELPVVKGGQAIFPLVRYQVDVYTG
                     QLKHAETESEVFLCLFGERGDSGLRQLYKSNMQVKFQRGQIDKFQVAAVSLGKLQKVL
                     LRCEASDKSQYWYCEQVIVREPGTTSESIFTCQRWLPFMSQGIIHSEIELYLQEMQIN
                     HQPKIQEEANDGDWKVTIVTGDLENAGTTATVFLYVYGETKCSGPIILGSGKHQLFNP
                     NTADIFKINLKDIGEIYKIRIGHDNTGKNPRWYLEEVRLENIATYELFCLPVDSWIAE
                     NENDGDLWKEIPIMGPKKAPLPVVLYEIRIYTGTMTGAETESNVFINLIGTRGDSGKR
                     RLHQSKNNEIKFQRGQVDIFSIKAVSLGKLKKVLISHDGTGPGNGWFLGSIVVKSEDE
                     DSSEEVLFLCNRWLDEYQDDGKTQRELLAESSPSAVGETGSTIS"
ORIGIN      
        1 actcgtaggc agcatctgag caacaggctc accagacttc agcctcttca ctccgactct
       61 tccacgctcc agctctcttc attaagatat tctagaagca actgaggagt ttctacaaac
      121 attttggaaa ttacagcagg tcaagtggaa gtttgttttc atttcagtta aggtacgagt
      181 tgttctgact gctgtgcaga cattcacacg cccgctgcta gaaagctgga gctggaagga
      241 gcattggggc ccgctgagtc ctcctttctc atgtatggat gcggatgtgg aggcaggccc
      301 taagtcttag tgtaggtgcc gatggtgcag gtctcagcca aaatgagtga taccccttct
      361 actggttttt ccatcattca tcctacgtct tctgaaggtc aagttccacc ccctcgccat
      421 ttgagcctca ctcatcctgt tgtggccaag cgaatcagtt tctacaagag cggagacccc
      481 caattcggcg gggtcagggt ggtggtcaac cctcgctcct ttaagtcctt tgatgctctg
      541 ctggataact tgtccaggaa ggtgcccctc ccttttggag tgaggaacat cagcacccct
      601 cggggcaggc acagcatcac gcgcctggag gagctggagg acggcgagtc ctacctatgt
      661 tcccacggca ggaaggtgca gcctgtagac ctggacaaag cccgtcggcg cccgcggccc
      721 tggctcagca gccgggccat tagcgcgcac tcaccgcccc accccgtagc cgtcgctgct
      781 cccggcatgc cccgcccccc acggagccta gtggtcttca ggaatggcga cccgaagacg
      841 aggcgtgcgg ttcttctgag caggagggtc acccagagct tcgaggcatt tctacagcac
      901 ctgacagagg tcatgcagcg ccctgtggtc aagctgtacg ctacggacgg aaggagggtt
      961 cccagcctcc aggcagtgat cctgagctct ggagctgtgg tggcggcagg aagggagcca
     1021 tttaaaccag gaaattatga catccaaaaa tacttgcttc ctgctagatt accagggatc
     1081 tctcagcgtg tgtaccccaa gggaaatgca aagtcagaaa gcagaaagag tagtaactgg
     1141 aaagttttta taatcaccag tgacttgcca gatgcaggga ccagctcaca gatttatatt
     1201 attctgtatg gacaacatag aagttcagcc cccatatatc tttatggaac agatggggct
     1261 cgatttcagg ttggccatga agacatattt actataacag ttggagacat tggagcactc
     1321 tttaagattc gtattggtca taccaactct ggatcctccc cttcctggca ctgcaaggag
     1381 atacagctgc ataatatgaa ttctggaaaa cagttttatg tacctgttca acgatggttg
     1441 gcacgagatc aagaggatgg ggaaatctgt cgagaatttc ctcttttaag taaaggacaa
     1501 cctgtccttc cagtgacaat atatgaagtg aatgtggcaa cgggtgagct atggaatgct
     1561 ggaacagtag caaacgtcta catttctatc catggggaaa agggagatac aggatccaga
     1621 caactattta gatcgaagag ctccttcaat tttttaagag gacaaactga cacctttttc
     1681 ctggaggctg tgcaccttgg agatttgtgt aagattgtga taggccatga tggacttggc
     1741 ccaggaaatg gttggtttct tgatgatgtt gttatcaagg atcccacaac aaattacgaa
     1801 tatgccttct tctgtcacag atggctagat cagggggaag atgattgtaa aattgtcaga
     1861 gaactgtatg ccagggataa cagtatcttc tctgcgagta ggtatcatgt atacacattt
     1921 cctggaaaac tcttttatga tgactggaga aagcatgaca cttctgaaat taattgccct
     1981 ctctttatct tctcagggca gaaattggaa cttaagagaa aagaaacatg gactgcagaa
     2041 agctggaagt ttacaaaagg aaatactctt cagttctata acaagctgac tggagggttt
     2101 gtccgtttgc atccagatgg cacagttgac gccattggag agaagacaga caaatatggt
     2161 gtctttgatg ttattttcaa caaaagaaat atatgcattt tccaaagtca tgagatgagg
     2221 catctttctc ttgctcttga caatggcatt gtcactggaa tggttagtgg tgaagccacc
     2281 actgagctgc gggtgcttta tcagcctaac cgctgtgcac ttcttgagtc ggcactggtt
     2341 cctggtcaca cagttgtttt tgatcgtcat ggcaaaatag ctgatgcatc atcagcaggc
     2401 tatgcaaatc tttcaaaaga atttgtgatt tttgtcaagg gggtgttcct caacagtgct
     2461 gtggttctgc ttgctacaag cctgtgtcag gccctgtgtc tccagcctga tggaagctgc
     2521 actggagtgg gaagccagtc tgaaaaatcc tactggaaag tgcataaaat cagctctggg
     2581 atttgcatgt ttgaaagtgt gaaaaatgca caaatgtatc taagaatcaa ggatggccga
     2641 tgcgatggaa caggtacagg agatgttgac tgtcatttta aaattaagaa gaacttgaag
     2701 aatgcatcca taagcctgga atctacgaag agcccaggat tgtttgttgg acttcagtca
     2761 gatgggcagg caaaaccaat gatttatacc aaggatgaga atgtttgctt ctatccacaa
     2821 gtcatccaat ttggcagaga aaacccaatg ggaatgtctg caacacccag ccaagaagaa
     2881 gaaaagatcc atgagtcaaa aaaacagaaa aaaatacccc cagaatctga ggctaggagt
     2941 cccttacctt cttcaactgc aaaaatcaga catttccaaa gtagtgagac tcttctgtca
     3001 gaagatgaat ggaaggtgtt agtgctgaca ggaaatacag gaactcaagc caatgtcact
     3061 ctctgggtgt atggagataa aggagtcact gggccaataa gtcttcgcaa ggacagctca
     3121 gagcagctct tccttccagg acacgaggat gagtttcagg ttgaaataag aaacactgga
     3181 aacatatata agataaggat aggacatgat ggaaccagtg agcaacccga gtggaacttg
     3241 cagagggtga ccatgcaaca tatgaaaagc aagaagatcc tagattttgc agcaaacgta
     3301 tggctgtctc ggattcaggc agatggggat gttgtctgtg agcttcctgt agtaaaagga
     3361 ggacaagcta tttttccatt agtgagatac caggttgacg tctacactgg gcagctgaag
     3421 catgcagaga cggagtctga ggttttcctc tgtctctttg gggagagggg agactctggc
     3481 ctcagacagc tgtacaaatc taacatgcaa gtaaaatttc aaagaggaca gattgataaa
     3541 tttcaagtag cagcagtgtc gcttggaaaa ctgcagaagg tgctgttgcg ctgtgaggcc
     3601 agtgacaaat cacagtactg gtactgtgaa caagtcatag tcagagagcc cggcaccaca
     3661 tccgagtcca tctttacctg tcaaagatgg cttcctttca tgtctcaggg cataattcat
     3721 tcagaaattg aactttatct tcaagaaatg caaataaatc atcaacctaa aatacaagag
     3781 gaagcaaatg atggagactg gaaggtgacc attgtcactg gggatcttga aaatgccggc
     3841 accacggcaa cagtgttcct ttatgtctat ggagaaacaa aatgttcagg tcctattatt
     3901 ttgggatctg ggaaacacca gctgtttaac cctaacactg cagatatatt caagattaat
     3961 ctcaaagata ttggtgaaat ctataaaata cgtattggac atgacaacac tggaaagaat
     4021 cccaggtggt atctggaaga agttagactt gaaaatatag ccacatatga gctattttgt
     4081 ttacctgttg attcctggat agctgagaat gaaaatgatg gcgatctatg gaaggaaata
     4141 cccatcatgg gaccaaagaa agcacctttg ccagtggtgc tttatgagat tcgcatatac
     4201 acaggcacaa tgacaggtgc agaaacagag tctaatgtat ttatcaacct catcggtacc
     4261 agaggtgatt caggaaaacg aagacttcat cagtccaaaa acaatgaaat caagtttcag
     4321 cgtggacagg ttgatatttt ttccattaag gctgtatctc tcggaaaatt gaagaaagtt
     4381 ctgattagtc atgatggaac aggtccaggt aatggatggt ttcttgggag tattgttgtt
     4441 aagtctgaag atgaagacag cagtgaagag gtgctgtttc tatgcaacag atggctagat
     4501 gagtaccaag atgatggcaa gacccagcgg gaattgctcg cagaaagtag tcccagtgca
     4561 gtaggagaga ctgggtctac catctcctga aagggcccac ttgggcctgt cgctccaata
     4621 tgcttcaaaa ggctattgat ctgattgtga tagtgcattt gtcttttgct tgggctggag
     4681 caaacacctg gggagggtca gtttgtgttg gacccactca ttgtttctga gaacttccaa
     4741 aattgggagg atgcactgac agcctccgcc aacagctgac caagatcagc ccctggtatc
     4801 tggggtaccc atactgctgc tgctcacctc ctccccctcc tcttccttca ccttttcttt
     4861 cccttcctcc ccactcttcc cctccctcct ctcccttctt tcttttcctt tttctttcag
     4921 aaaatctgac ttactgctaa ggttactgaa atgtctaaat aagtattctt tgtagaaaat
     4981 aactgaagag gtacctaata acatttgatg catgaaaaac acttttatgc aacctatgtt
     5041 aattttaaag tggaagtttt attgttagac aatggtatgt ctctctcaga attagtggta
     5101 aaatcaataa gaaaatgtag aaagaaccca accaattggg ttactgtgtg ttcccagtgc
     5161 acgtcctgtg ggtccacttg cagtttgagc ttcgagctgg tgacagagtc ctgcaggcag
     5221 agagcagcag agcgcagggc agatatctca catccatcgg tcactttttc tcatgaagcc
     5281 tcaaatactt gtcaacttgg tgccacaggt gccttcttct aatccgttaa tttggcacat
     5341 aagctaaaac tcatttgcca gccccggaga ggtcaggatg tagcttttga tatcaaagac
     5401 acctgtcttt gaatctctat tttgccccgt gaggtagatg ctatcatcac ccacattttg
     5461 cagatgagga aaccgacaca tggaaaagcc aagtgacctg cccaagctta gagagtggaa
     5521 caagcaggag agccgggatg tgaccctaga agtctgactt cagagcccgt gcgcgtccac
     5581 actgtgacct tggccctcct gccttccctg cttgttttta gtatcccatg aaatcaggca
     5641 gaggggccaa ggaggcaaat cttgcatacc accttcatga tttttgtcgt ctgcaatagt
     5701 acctgtacta gtatatgctt gatattttct tccttgaact gtgtctaaat cagtgtattt
     5761 agaggtgaag agagcttggc ctcatcctaa atcatattcc aaatatccat gaaatcactg
     5821 atttaatatg tcattacatt ttttcctaaa acacattaaa ataaatctat gtctaacaaa
     5881 aa
//
