LOCUS       XM_047422069            5885 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens RP1 axonemal microtubule associated (RP1),
            transcript variant X1, mRNA.
ACCESSION   XM_047422069
VERSION     XM_047422069.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000008.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5885
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="8"
     gene            1..5885
                     /gene="RP1"
                     /gene_synonym="DCDC4A; ORP1"
                     /note="RP1 axonemal microtubule associated; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 ESTs, 5 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:6101"
                     /db_xref="HGNC:HGNC:10263"
                     /db_xref="MIM:603937"
     CDS             322..4593
                     /gene="RP1"
                     /gene_synonym="DCDC4A; ORP1"
                     /codon_start=1
                     /product="oxygen-regulated protein 1 isoform X1"
                     /protein_id="XP_047278025.1"
                     /db_xref="GeneID:6101"
                     /db_xref="HGNC:HGNC:10263"
                     /db_xref="MIM:603937"
                     /translation="MVQVSAKMSDTPSTGFSIIHPTSSEGQVPPPRHLSLTHPVVAKR
                     ISFYKSGDPQFGGVRVVVNPRSFKSFDALLDNLSRKVPLPFGVRNISTPRGRHSITRL
                     EELEDGESYLCSHGRKVQPVDLDKARRRPRPWLSSRAISAHSPPHPVAVAAPGMPRPP
                     RSLVVFRNGDPKTRRAVLLSRRVTQSFEAFLQHLTEVMQRPVVKLYATDGRRVPSLQA
                     VILSSGAVVAAGREPFKPGNYDIQKYLLPARLPGISQRVYPKGNAKSESRKSSNWKVF
                     IITSDLPDAGTSSQIYIILYGQHRSSAPIYLYGTDGARFQVGHEDIFTITVGDIGALF
                     KIRIGHTNSGSSPSWHCKEIQLHNMNSGKQFYVPVQRWLARDQEDGEICREFPLLSKG
                     QPVLPVTIYEVNVATGELWNAGTVANVYISIHGEKGDTGSRQLFRSKSSFNFLRGQTD
                     TFFLEAVHLGDLCKIVIGHDGLGPGNGWFLDDVVIKDPTTNYEYAFFCHRWLDQGEDD
                     CKIVRELYARDNSIFSASRYHVYTFPGKLFYDDWRKHDTSEINCPLFIFSGQKLELKR
                     KETWTAESWKFTKGNTLQFYNKLTGGFVRLHPDGTVDAIGEKTDKYGVFDVIFNKRNI
                     CIFQSHEMRHLSLALDNGIVTGMVSGEATTELRVLYQPNRCALLESALVPGHTVVFDR
                     HGKIADASSAGYANLSKEFVIFVKGVFLNSAVVLLATSLCQALCLQPDGSCTGVGSQS
                     EKSYWKVHKISSGICMFESVKNAQMYLRIKDGRCDGTGTGDVDCHFKIKKNLKNASIS
                     LESTKSPGLFVGLQSDGQAKPMIYTKDENVCFYPQVIQFGRENPMGMSATPSQEEEKI
                     HESKKQKKIPPESEARSPLPSSTAKEIRHFQSSETLLSEDEWKVLVLTGNTGTQANVT
                     LWVYGDKGVTGPISLRKDSSEQLFLPGHEDEFQVEIRNTGNIYKIRIGHDGTSEQPEW
                     NLQRVTMQHMKSKKILDFAANVWLSRIQADGDVVCELPVVKGGQAIFPLVRYQVDVYT
                     GQLKHAETESEVFLCLFGERGDSGLRQLYKSNMQVKFQRGQIDKFQVAAVSLGKLQKV
                     LLRCEASDKSQYWYCEQVIVREPGTTSESIFTCQRWLPFMSQGIIHSEIELYLQEMQI
                     NHQPKIQEEANDGDWKVTIVTGDLENAGTTATVFLYVYGETKCSGPIILGSGKHQLFN
                     PNTADIFKINLKDIGEIYKIRIGHDNTGKNPRWYLEEVRLENIATYELFCLPVDSWIA
                     ENENDGDLWKEIPIMGPKKAPLPVVLYEIRIYTGTMTGAETESNVFINLIGTRGDSGK
                     RRLHQSKNNEIKFQRGQVDIFSIKAVSLGKLKKVLISHDGTGPGNGWFLGSIVVKSED
                     EDSSEEVLFLCNRWLDEYQDDGKTQRELLAESSPSAVGETGSTIS"
ORIGIN      
        1 actcgtaggc agcatctgag caacaggctc accagacttc agcctcttca ctccgactct
       61 tccacgctcc agctctcttc attaagatat tctagaagca actgaggagt ttctacaaac
      121 attttggaaa ttacagcagg tcaagtggaa gtttgttttc atttcagtta aggtacgagt
      181 tgttctgact gctgtgcaga cattcacacg cccgctgcta gaaagctgga gctggaagga
      241 gcattggggc ccgctgagtc ctcctttctc atgtatggat gcggatgtgg aggcaggccc
      301 taagtcttag tgtaggtgcc gatggtgcag gtctcagcca aaatgagtga taccccttct
      361 actggttttt ccatcattca tcctacgtct tctgaaggtc aagttccacc ccctcgccat
      421 ttgagcctca ctcatcctgt tgtggccaag cgaatcagtt tctacaagag cggagacccc
      481 caattcggcg gggtcagggt ggtggtcaac cctcgctcct ttaagtcctt tgatgctctg
      541 ctggataact tgtccaggaa ggtgcccctc ccttttggag tgaggaacat cagcacccct
      601 cggggcaggc acagcatcac gcgcctggag gagctggagg acggcgagtc ctacctatgt
      661 tcccacggca ggaaggtgca gcctgtagac ctggacaaag cccgtcggcg cccgcggccc
      721 tggctcagca gccgggccat tagcgcgcac tcaccgcccc accccgtagc cgtcgctgct
      781 cccggcatgc cccgcccccc acggagccta gtggtcttca ggaatggcga cccgaagacg
      841 aggcgtgcgg ttcttctgag caggagggtc acccagagct tcgaggcatt tctacagcac
      901 ctgacagagg tcatgcagcg ccctgtggtc aagctgtacg ctacggacgg aaggagggtt
      961 cccagcctcc aggcagtgat cctgagctct ggagctgtgg tggcggcagg aagggagcca
     1021 tttaaaccag gaaattatga catccaaaaa tacttgcttc ctgctagatt accagggatc
     1081 tctcagcgtg tgtaccccaa gggaaatgca aagtcagaaa gcagaaagag tagtaactgg
     1141 aaagttttta taatcaccag tgacttgcca gatgcaggga ccagctcaca gatttatatt
     1201 attctgtatg gacaacatag aagttcagcc cccatatatc tttatggaac agatggggct
     1261 cgatttcagg ttggccatga agacatattt actataacag ttggagacat tggagcactc
     1321 tttaagattc gtattggtca taccaactct ggatcctccc cttcctggca ctgcaaggag
     1381 atacagctgc ataatatgaa ttctggaaaa cagttttatg tacctgttca acgatggttg
     1441 gcacgagatc aagaggatgg ggaaatctgt cgagaatttc ctcttttaag taaaggacaa
     1501 cctgtccttc cagtgacaat atatgaagtg aatgtggcaa cgggtgagct atggaatgct
     1561 ggaacagtag caaacgtcta catttctatc catggggaaa agggagatac aggatccaga
     1621 caactattta gatcgaagag ctccttcaat tttttaagag gacaaactga cacctttttc
     1681 ctggaggctg tgcaccttgg agatttgtgt aagattgtga taggccatga tggacttggc
     1741 ccaggaaatg gttggtttct tgatgatgtt gttatcaagg atcccacaac aaattacgaa
     1801 tatgccttct tctgtcacag atggctagat cagggggaag atgattgtaa aattgtcaga
     1861 gaactgtatg ccagggataa cagtatcttc tctgcgagta ggtatcatgt atacacattt
     1921 cctggaaaac tcttttatga tgactggaga aagcatgaca cttctgaaat taattgccct
     1981 ctctttatct tctcagggca gaaattggaa cttaagagaa aagaaacatg gactgcagaa
     2041 agctggaagt ttacaaaagg aaatactctt cagttctata acaagctgac tggagggttt
     2101 gtccgtttgc atccagatgg cacagttgac gccattggag agaagacaga caaatatggt
     2161 gtctttgatg ttattttcaa caaaagaaat atatgcattt tccaaagtca tgagatgagg
     2221 catctttctc ttgctcttga caatggcatt gtcactggaa tggttagtgg tgaagccacc
     2281 actgagctgc gggtgcttta tcagcctaac cgctgtgcac ttcttgagtc ggcactggtt
     2341 cctggtcaca cagttgtttt tgatcgtcat ggcaaaatag ctgatgcatc atcagcaggc
     2401 tatgcaaatc tttcaaaaga atttgtgatt tttgtcaagg gggtgttcct caacagtgct
     2461 gtggttctgc ttgctacaag cctgtgtcag gccctgtgtc tccagcctga tggaagctgc
     2521 actggagtgg gaagccagtc tgaaaaatcc tactggaaag tgcataaaat cagctctggg
     2581 atttgcatgt ttgaaagtgt gaaaaatgca caaatgtatc taagaatcaa ggatggccga
     2641 tgcgatggaa caggtacagg agatgttgac tgtcatttta aaattaagaa gaacttgaag
     2701 aatgcatcca taagcctgga atctacgaag agcccaggat tgtttgttgg acttcagtca
     2761 gatgggcagg caaaaccaat gatttatacc aaggatgaga atgtttgctt ctatccacaa
     2821 gtcatccaat ttggcagaga aaacccaatg ggaatgtctg caacacccag ccaagaagaa
     2881 gaaaagatcc atgagtcaaa aaaacagaaa aaaatacccc cagaatctga ggctaggagt
     2941 cccttacctt cttcaactgc aaaagaaatc agacatttcc aaagtagtga gactcttctg
     3001 tcagaagatg aatggaaggt gttagtgctg acaggaaata caggaactca agccaatgtc
     3061 actctctggg tgtatggaga taaaggagtc actgggccaa taagtcttcg caaggacagc
     3121 tcagagcagc tcttccttcc aggacacgag gatgagtttc aggttgaaat aagaaacact
     3181 ggaaacatat ataagataag gataggacat gatggaacca gtgagcaacc cgagtggaac
     3241 ttgcagaggg tgaccatgca acatatgaaa agcaagaaga tcctagattt tgcagcaaac
     3301 gtatggctgt ctcggattca ggcagatggg gatgttgtct gtgagcttcc tgtagtaaaa
     3361 ggaggacaag ctatttttcc attagtgaga taccaggttg acgtctacac tgggcagctg
     3421 aagcatgcag agacggagtc tgaggttttc ctctgtctct ttggggagag gggagactct
     3481 ggcctcagac agctgtacaa atctaacatg caagtaaaat ttcaaagagg acagattgat
     3541 aaatttcaag tagcagcagt gtcgcttgga aaactgcaga aggtgctgtt gcgctgtgag
     3601 gccagtgaca aatcacagta ctggtactgt gaacaagtca tagtcagaga gcccggcacc
     3661 acatccgagt ccatctttac ctgtcaaaga tggcttcctt tcatgtctca gggcataatt
     3721 cattcagaaa ttgaacttta tcttcaagaa atgcaaataa atcatcaacc taaaatacaa
     3781 gaggaagcaa atgatggaga ctggaaggtg accattgtca ctggggatct tgaaaatgcc
     3841 ggcaccacgg caacagtgtt cctttatgtc tatggagaaa caaaatgttc aggtcctatt
     3901 attttgggat ctgggaaaca ccagctgttt aaccctaaca ctgcagatat attcaagatt
     3961 aatctcaaag atattggtga aatctataaa atacgtattg gacatgacaa cactggaaag
     4021 aatcccaggt ggtatctgga agaagttaga cttgaaaata tagccacata tgagctattt
     4081 tgtttacctg ttgattcctg gatagctgag aatgaaaatg atggcgatct atggaaggaa
     4141 atacccatca tgggaccaaa gaaagcacct ttgccagtgg tgctttatga gattcgcata
     4201 tacacaggca caatgacagg tgcagaaaca gagtctaatg tatttatcaa cctcatcggt
     4261 accagaggtg attcaggaaa acgaagactt catcagtcca aaaacaatga aatcaagttt
     4321 cagcgtggac aggttgatat tttttccatt aaggctgtat ctctcggaaa attgaagaaa
     4381 gttctgatta gtcatgatgg aacaggtcca ggtaatggat ggtttcttgg gagtattgtt
     4441 gttaagtctg aagatgaaga cagcagtgaa gaggtgctgt ttctatgcaa cagatggcta
     4501 gatgagtacc aagatgatgg caagacccag cgggaattgc tcgcagaaag tagtcccagt
     4561 gcagtaggag agactgggtc taccatctcc tgaaagggcc cacttgggcc tgtcgctcca
     4621 atatgcttca aaaggctatt gatctgattg tgatagtgca tttgtctttt gcttgggctg
     4681 gagcaaacac ctggggaggg tcagtttgtg ttggacccac tcattgtttc tgagaacttc
     4741 caaaattggg aggatgcact gacagcctcc gccaacagct gaccaagatc agcccctggt
     4801 atctggggta cccatactgc tgctgctcac ctcctccccc tcctcttcct tcaccttttc
     4861 tttcccttcc tccccactct tcccctccct cctctccctt ctttcttttc ctttttcttt
     4921 cagaaaatct gacttactgc taaggttact gaaatgtcta aataagtatt ctttgtagaa
     4981 aataactgaa gaggtaccta ataacatttg atgcatgaaa aacactttta tgcaacctat
     5041 gttaatttta aagtggaagt tttattgtta gacaatggta tgtctctctc agaattagtg
     5101 gtaaaatcaa taagaaaatg tagaaagaac ccaaccaatt gggttactgt gtgttcccag
     5161 tgcacgtcct gtgggtccac ttgcagtttg agcttcgagc tggtgacaga gtcctgcagg
     5221 cagagagcag cagagcgcag ggcagatatc tcacatccat cggtcacttt ttctcatgaa
     5281 gcctcaaata cttgtcaact tggtgccaca ggtgccttct tctaatccgt taatttggca
     5341 cataagctaa aactcatttg ccagccccgg agaggtcagg atgtagcttt tgatatcaaa
     5401 gacacctgtc tttgaatctc tattttgccc cgtgaggtag atgctatcat cacccacatt
     5461 ttgcagatga ggaaaccgac acatggaaaa gccaagtgac ctgcccaagc ttagagagtg
     5521 gaacaagcag gagagccggg atgtgaccct agaagtctga cttcagagcc cgtgcgcgtc
     5581 cacactgtga ccttggccct cctgccttcc ctgcttgttt ttagtatccc atgaaatcag
     5641 gcagaggggc caaggaggca aatcttgcat accaccttca tgatttttgt cgtctgcaat
     5701 agtacctgta ctagtatatg cttgatattt tcttccttga actgtgtcta aatcagtgta
     5761 tttagaggtg aagagagctt ggcctcatcc taaatcatat tccaaatatc catgaaatca
     5821 ctgatttaat atgtcattac attttttcct aaaacacatt aaaataaatc tatgtctaac
     5881 aaaaa
//
