LOCUS       XM_011511018            5248 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens RANBP2 like and GRIP domain containing 4
            (RGPD4), transcript variant X3, mRNA.
ACCESSION   XM_011511018
VERSION     XM_011511018.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000002.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011511018.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5248
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
     gene            1..5248
                     /gene="RGPD4"
                     /gene_synonym="RGP4"
                     /note="RANBP2 like and GRIP domain containing 4; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 5 long SRA reads, 4 Proteins, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:285190"
                     /db_xref="HGNC:HGNC:32417"
                     /db_xref="MIM:612707"
     CDS             123..5186
                     /gene="RGPD4"
                     /gene_synonym="RGP4"
                     /codon_start=1
                     /product="ranBP2-like and GRIP domain-containing protein 4
                     isoform X2"
                     /protein_id="XP_011509320.1"
                     /db_xref="GeneID:285190"
                     /db_xref="HGNC:HGNC:32417"
                     /db_xref="MIM:612707"
                     /translation="MSCSKAYGERYVASVQGSAPSPRKKSTRGFYFAKLYYEAKEYDL
                     AKKYICTYINVREMDPRAHRFLGLLYELEENTEKAVECYRRSVELNPTQKDLVLKIAE
                     LLCKNDVTDGRAKYWVERAAKLFPGSPAIYKLKEQLLDCEGEDGWNKLFDLIQSELYV
                     RPDDVHVNIRLVELYRSTKRLKDAVARCHEAERNIALRSSLEWNSCVVQTLKEYLESL
                     QCLESDKSDWRATNTDLLLAYANLMLLTLSTRDVQESRELLESFDSALQSAKSSLGGN
                     DELSATFLEMKGHFYMHAGSLLLKMGQHGNNVQWRALSELAALCYLIAFQVPRPKIKL
                     IKGEAGQNLLEMMACDRLSQSGHMLLNLSRGKQDFLKVVVETFANKSGQSALYDALFS
                     SQSPKDTSFLGSDDIGNIDVQEPELEDLARYDVGAIRAHNGSLQHLTWLGLQWNSLPA
                     LPGIRKWLKQLFHHLPQETSRLETNAPESICILDLEVFLLGVVYTSHLQLKEKCNSHH
                     SSYQPLCLPLPVCKQLCTERQKSWWDAVCTLIHRKAVPGNSAKLRLLVQHEINTLRAQ
                     EKHGLQPALLVHWAKCLQKMGSGLNSFYDQREYIGRSVHYWKKVLPLLKIIKKKNSIP
                     EPIDPLFKHFHSVDIQASEIVEYEEDAHVTFAILDAVNGNIEDAMTAFESIKSVVSYW
                     NLALIFHRKAEDIANDALSPEEQEECKNYLRKTRGYLIKILDDSDSNLSVVKKLPVPL
                     ESVKEMLKSVMQELENYSEGDPLYKNGSLRNADSEIKHSTPSPTKYSLSPSKSYKYSP
                     KTPPRWAEDQNSLLKMIRQEVKAIKEEMQELKLNSSKSASHHRWPTENYGPDSVPDGY
                     QGSQTFHGAPLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKGSSNTEFKSTKEGF
                     SIPVSADGFKFGISEPGNQEKESEKPLENDTGFQAQDISGQKNGRGVIFGQTSSTFTF
                     ADVAKSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDAYKT
                     EDSDDIHFEPVVQMPEKVELVIGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKIL
                     KNEVNGKPRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLER
                     LAAKFKTPELAEEFKQKFEECQQLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKD
                     FKTFLTNDQTKVTEEENKGSGTGAAGASDTTIKPNPENTGPTLEWDNCDLREDALDDS
                     VSSSSVHASPLASSPVRKNLFHFGESTTGSNFSFKSALSPSKSPAKLNQSGTSVGTDE
                     ESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEKVVFSHRAELYRYDKDVGQWKERG
                     IGDIKILQNYDNKQVRIVMRRDQVLKLCANHTITPDMSLQNMKGTERVWVWTACDFAD
                     GERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEKDSLITPHVSRSSTPRESPCGKIAV
                     AVLEETTRERTDVIQGDDVADAASEVEVSSTSETTTKAVVSPPKFVFGSESVKRIFSS
                     EKSKPFAFGNSSATGSLFGFSFNASLKSNNSETSSVAQSGSESKVEPKKCELSKNSDI
                     EQSSDSKVKNLSASFPMEESSINYTFKTPEKGFNFSLFKSNPMAFWTSTPSSQPESKA
                     KEKKKPEDSPSDSLGLLTS"
ORIGIN      
        1 acagtggtcc tccgccggct acgcggagtc agtggctttc aggcgctttc ctgttggaat
       61 tggcgactgc tgcggggctg agcgctggtt tcacgcgtct cgggagccag gttggtggcg
      121 cgatgagttg cagcaaggcc tacggggagc ggtacgtcgc ctccgtgcag ggctccgccc
      181 cgtcgcctcg aaagaagtca acgagaggat tctattttgc aaagctgtat tatgaagcta
      241 aagaatatga tcttgctaaa aaatacatat gtacttacat taatgtgcga gagatggatc
      301 ccagagctca cagatttctg ggtcttcttt atgaattgga agaaaacaca gagaaagccg
      361 ttgaatgtta caggcgttca gtggaattaa acccaacaca aaaagatctg gtgttgaaga
      421 ttgcagaatt gctttgtaaa aatgatgtta ctgatggaag agcaaaatac tgggtggaaa
      481 gagcagcaaa acttttccca ggaagtcctg caatttataa actaaaggaa cagcttctag
      541 attgtgaagg tgaagatgga tggaataaac tttttgactt gattcagtca gaactttatg
      601 taagacctga tgacgtccat gtgaacatcc ggctagtgga gttgtatcgc tcaactaaaa
      661 gattgaagga tgctgtggcc cgctgccatg aggcagagag gaacatagct ttgcgttcaa
      721 gtttagagtg gaattcgtgt gttgtacaga cccttaagga atatctggag tctttacagt
      781 gtttggagtc tgataaaagt gactggcgag caaccaatac agacttactg ctggcctatg
      841 ctaatcttat gcttcttacg ctttccacta gagatgtgca ggaaagtaga gaattactgg
      901 aaagttttga tagtgctctt cagtctgcga aatcttcttt gggtggaaat gatgaactgt
      961 cagctacttt cttagaaatg aaaggacatt tctacatgca tgctggttct ctgctcttga
     1021 agatgggtca gcatggtaat aatgttcaat ggcgagctct ttctgagctg gctgcattgt
     1081 gctatctcat agcatttcag gttccaagac caaagattaa attaataaaa ggtgaagctg
     1141 gacaaaatct gctggaaatg atggcctgtg accgactgag ccaatcaggg cacatgttgc
     1201 taaacttaag tcgtggcaag caagattttt taaaagtggt tgttgaaact tttgccaaca
     1261 aaagcgggca gtctgcatta tatgatgctc tgttttctag tcagtcacct aaggatacat
     1321 cttttcttgg tagcgatgat attggaaaca ttgatgtaca agaaccagag cttgaagatt
     1381 tggctagata cgatgttggt gctattcgag cacataatgg tagtcttcag caccttactt
     1441 ggcttggctt acagtggaat tcattgcctg ctttacctgg aatccgaaaa tggctaaaac
     1501 agcttttcca tcatttgccc caggaaacct caaggcttga aacaaatgca cctgaatcaa
     1561 tatgtatttt agatcttgaa gtatttctcc ttggagtagt atataccagc cacttacaat
     1621 taaaggagaa atgtaattct caccacagct cctatcagcc gttatgcctg ccccttcctg
     1681 tatgtaaaca gctttgtaca gaaagacaaa aatcttggtg ggatgcggtt tgtactctga
     1741 ttcacagaaa agcagtacct ggaaactcag caaaattgag acttttagtt cagcatgaaa
     1801 taaacactct aagagcccag gaaaaacatg gccttcaacc tgctctgctt gtacattggg
     1861 caaaatgcct tcagaaaatg ggcagtggtc ttaattcttt ttatgatcaa cgagaataca
     1921 tagggagaag tgttcattat tggaagaaag ttttgccatt gttgaagata ataaaaaaga
     1981 agaacagtat tcctgaacct attgatcctc tgtttaaaca ttttcatagt gtagacattc
     2041 aggcatcaga aattgttgaa tatgaagaag acgcacacgt aacttttgct atattggatg
     2101 cagtaaatgg aaatatagaa gatgctatga ctgcttttga atctataaaa agtgttgttt
     2161 cttattggaa tcttgcactg atttttcaca ggaaggcaga agacattgca aatgatgccc
     2221 tttctcctga agaacaagaa gaatgcaaaa attatctgag aaagaccagg ggctacctaa
     2281 taaagatttt agatgacagt gattcaaatc tttcagtggt caagaaattg cctgtgcccc
     2341 tggagtctgt aaaagagatg cttaagtcag tcatgcagga actcgaaaac tatagtgaag
     2401 gagatcctct ctataaaaat ggttctttgc gaaatgcgga ttcagaaata aaacattcta
     2461 caccatctcc taccaaatat tcactatcac caagtaaaag ttacaagtat tctcccaaaa
     2521 caccacctcg atgggcagaa gatcagaatt ctttactgaa aatgattcgc caagaagtaa
     2581 aggccattaa ggaagaaatg caggagttga aactaaatag cagtaagtca gcatcccatc
     2641 atcgttggcc cacagagaat tatggaccag actcggtgcc tgatggatat caggggtcac
     2701 agacatttca tggggctcca ctaacagttg caactactgg cccttcagta tattatagtc
     2761 agtcaccagc atataattcc cagtatcttc tcagaccagc agctaatgtt actcccacaa
     2821 agggttcttc taatacagaa tttaagtcaa ccaaagaagg attttccatc cctgtgtctg
     2881 ctgatggatt taaatttggc atttcggaac caggaaatca agaaaaggaa agtgaaaagc
     2941 ctcttgaaaa tgatactggc ttccaggctc aggatattag tggccagaag aatggccgtg
     3001 gtgtgatttt tggccaaaca agtagcactt ttacatttgc agatgttgca aaatcaactt
     3061 caggagaagg atttcagttt ggcaaaaaag accccaattt caagggattt tcaggtgctg
     3121 gagaaaaatt attctcatca caatgcggta aaatggccaa taaagcaaac acttccggtg
     3181 actttgagaa agatgatgat gcctataaga ctgaggacag cgatgacatc cattttgaac
     3241 cagtagttca aatgcctgaa aaagtagaac ttgtaatagg agaagaaggt gaaaaagttc
     3301 tgtattcaca gggggtaaaa ctatttagat ttgatgctga ggtaaggcag tggaaagaaa
     3361 ggggcttggg gaacttaaaa attctcaaaa acgaggtcaa tggcaaacca agaatgctga
     3421 tgcgaagaga acaagtacta aaagtgtgtg ctaatcattg gataacgact acaatgaacc
     3481 tgaagcccct gtctggatca gatagagcat ggatgtggtc agccagtgat ttctctgatg
     3541 gtgatgccaa actagagcgg ttagcagcaa aatttaaaac accagagctg gctgaagaat
     3601 tcaagcagaa atttgaggaa tgccagcagc ttctgttaga cataccactt caaactcccc
     3661 ataaacttgt agatactggc agagctgcca agttaataca gagagctgaa gaaatgaaga
     3721 gtggactgaa agatttcaaa acatttttga caaatgatca aacaaaagtc actgaggaag
     3781 aaaataaggg ttcaggtaca ggtgcggccg gtgcctcaga cacaacaata aaacccaatc
     3841 ctgaaaacac tgggcccaca ttagaatggg ataactgtga tttaagggaa gatgctttgg
     3901 atgatagtgt cagtagtagc tcagtacatg cttctccatt ggcaagtagc cctgtgagaa
     3961 aaaatctttt ccattttggt gagtcaacaa caggatctaa cttcagtttt aaatctgctt
     4021 tgagtccatc taagtctcct gccaagttga atcagagtgg gacttcagtt ggcactgatg
     4081 aagaatctga tgttactcaa gaagaagaga gagatggaca gtactttgaa cctgttgttc
     4141 ctttacctga tctagttgaa gtatccagtg gtgaggaaaa tgaaaaagtt gtttttagtc
     4201 acagggcaga actctacaga tatgataaag atgttggtca atggaaagaa aggggcattg
     4261 gtgatataaa gattttacag aattatgata ataagcaagt tcgtatagtg atgagaaggg
     4321 accaagtatt aaaactttgt gccaatcaca caataactcc agacatgagt ttgcaaaata
     4381 tgaaagggac agaaagagta tgggtgtgga ctgcatgtga ttttgcagat ggagaaagaa
     4441 aagtagagca tttagctgtt cgttttaaac tacaggatgt tgcagactcg tttaagaaaa
     4501 tttttgatga agcaaaaaca gcccaggaaa aagattcttt gataacacct catgtttctc
     4561 ggtcaagcac tcccagagag tcaccatgtg gcaaaattgc tgtagctgta ttagaagaaa
     4621 ccacaagaga gaggacagat gttattcagg gtgatgatgt agcagatgca gcttcagaag
     4681 ttgaagtgtc tagcacatct gaaacaacaa caaaagcagt ggtttctcct ccaaagtttg
     4741 tatttggttc agagtctgtt aaaagaattt ttagtagtga aaaatcaaaa ccatttgcat
     4801 ttggcaacag ttctgccact gggtctttgt ttggatttag ttttaatgca tctttgaaaa
     4861 gtaacaacag tgaaactagt tcagtagccc agagtggatc tgaaagcaaa gtggaaccta
     4921 aaaaatgtga actgtcaaag aactctgata tcgaacagtc ttcagatagc aaagtcaaaa
     4981 atctctctgc ttcctttcca atggaagaat cttcaatcaa ctacacattt aaaacaccag
     5041 aaaagggatt taattttagc ctttttaaat ctaatcccat ggccttttgg actagcaccc
     5101 cttcctcaca gcctgagagc aaagcaaaag agaagaaaaa acctgaagat tctccctcag
     5161 atagtctcgg tctcctgacc tcgtgatcca cccgcctcgg cctcccaaag tgctgggatt
     5221 acaggcatga gccactgcgc ctggctga
//
