LOCUS       XM_011532851            5837 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens RANBP2 like and GRIP domain containing 1
            (RGPD1), transcript variant X6, mRNA.
ACCESSION   XM_011532851
VERSION     XM_011532851.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000002.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011532851.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5837
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
     gene            1..5837
                     /gene="RGPD1"
                     /gene_synonym="RanBP2L2; ranBP2L6; RGP1; RGPD2"
                     /note="RANBP2 like and GRIP domain containing 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 ESTs, 66 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 10 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:400966"
                     /db_xref="HGNC:HGNC:32414"
                     /db_xref="MIM:612704"
     CDS             17..5029
                     /gene="RGPD1"
                     /gene_synonym="RanBP2L2; ranBP2L6; RGP1; RGPD2"
                     /codon_start=1
                     /product="RANBP2-like and GRIP domain-containing protein 1
                     isoform X4"
                     /protein_id="XP_011531153.2"
                     /db_xref="GeneID:400966"
                     /db_xref="HGNC:HGNC:32414"
                     /db_xref="MIM:612704"
                     /translation="MNVMGFNTDRLAWTRNFDFEGSLSPVIAPKKARPSETGSDDKLR
                     GFYFAKLYYEAKEYDLAKKYVCTYLSVQERDPRAHRFLGLLYELEENTEKAVECYRRS
                     LELNPPQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAIYKLKEHLLDCEGE
                     DGWNKLFDWIQSELYVRPDDVHMNIRLVELYRSNKRLKDAVARCHEAERNIALRSSLE
                     WNSCVVQTLKEYLESLQCLESDKSDWRATNTDLLLAYANLMLLTLSTRDVQESRELLE
                     SFDSALQSAKSSLGGNDELSATFLEMKGHFYMHAGSLLLKMGQHGNNVQWQALSELAA
                     LCYVIAFQVPRPKIKLIKGEAGQNLLEMMACDRLSQSGHMLLNLSRGKQDFLKEVVET
                     FANKSGQSVLYNALFSSQSSKDTSFLGSDDIGNIDVQEPELEDLARYDVGAIQAHNGS
                     LQHLTWLGLQWNSLPALPGIRKWLKQLFHHLPQETSRLETNAPESICILDLEVFLLGV
                     VYTSHLQLKEKCNSHHSSYQPLCLPLPVCKRLCTERQKSWWDAVCTLIHRKAVPGNSA
                     ELRLVVQHEINTLRAQEKHGLQPALLVHWAKCLQKMGRGLNSSYDQQEYIGRSVHYWK
                     KVLPLLKIIKKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDAHITFAILDAVHGNIED
                     AVTAFESIKSVVSYWNLALIFHRKAEDIENDAVFPEEQEECKNYLRKTRDYLIKIIDD
                     SDSNLSVVKKLPVPLESVKEMLKSVMQELEDYSEGGPLYKNGSLRNADSEIKHSTPSP
                     TKYSLSPSKSYKYSPKTPPRWAEDQNSLRKMICQEVKAITKLNSSKSASRHRWPTENY
                     GPDSVPDGYQGSQTFHGAPLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKGSSNT
                     EFKSTKEGFSIAVSADGFKFGISEPGNQEKKSEKPLENDTGFQAQDISGQKNGRGVIF
                     GQTSSTFTFADVAKSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQCGKMANKANTSGDF
                     EKDDDACKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEISQWKE
                     RGLGNLKILKNEVNGKPRMLMRRDQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDF
                     SDGDAKLERLAAQFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRA
                     EEMKSGLKDFKTFLTNDQTKVTEEENKGSGTGAAGASDTTIKPNPENTGPTLEWDNYD
                     LREDALDDNVSSSSVHDSPLASSPVRKNIFRFDESTTGFNFSFKSALSLSKSPAKLNQ
                     SGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAELYRYDK
                     DVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVW
                     VWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEKDSLITPHVSRSSTPR
                     ESPCGKIAVAVLEETTRERTDVIQGDDVADAASEVEVSSTSETTTKAVVSPPKFVFGS
                     ESVKRIFSSEKSNPFAFGNSSATGSLFGFSFNAPLKSNDSETSSVAQSGSESKVEPKK
                     CELSKNSDIEQSSDSKVKNLSASFPMEESSINYTFKTPEKAKEKKKPEDSPSDSLGLL
                     TS"
ORIGIN      
        1 atttgtgact tgtctcatga acgtgatggg ttttaacaca gaccgcttag catggactag
       61 aaattttgac tttgaaggat cactttcccc tgtcattgca cccaaaaaag caaggccttc
      121 tgagactgga tctgatgata agttgagagg attctatttt gcaaagctgt attatgaagc
      181 taaagaatat gatcttgcta aaaaatacgt atgtacttac cttagtgtgc aagagaggga
      241 tcccagagct cacagatttc tgggtcttct ttatgaattg gaagaaaaca cagagaaagc
      301 cgttgaatgt tacaggcgtt cactggaatt aaacccacca caaaaagatc ttgtgttgaa
      361 gattgcagaa ttgctttgta aaaatgatgt tactgatgga agagcaaaat actgggttga
      421 aagggcagcg aaacttttcc caggaagtcc tgcaatttat aaactaaagg aacatcttct
      481 agattgtgaa ggtgaagatg gatggaataa actttttgac tggattcagt cagaacttta
      541 tgtaagacct gatgacgtcc atatgaacat ccggctagtg gagttgtatc gctcaaataa
      601 aagattgaag gatgctgtgg cccgctgcca tgaggcagag aggaacatag ctttgcgttc
      661 aagtttagag tggaattcgt gtgttgtaca gacccttaag gaatatctgg agtctttaca
      721 gtgtttggag tctgataaaa gtgactggcg agcaaccaat acagacttac tgctggccta
      781 tgctaatctt atgcttctta cgctttccac tagagatgtg caggaaagta gagaattact
      841 ggaaagtttt gatagtgctc ttcagtctgc aaaatcttct ttgggtggaa atgatgaact
      901 gtcagctact ttcttagaaa tgaaaggaca tttctacatg catgctggtt ctctgctctt
      961 gaagatgggt cagcatggta ataatgttca atggcaagct ctttctgagc tggctgcatt
     1021 gtgctatgtc atagcatttc aggttccaag accaaagatt aaattaataa aaggtgaagc
     1081 tggacaaaat ctgctggaaa tgatggcctg tgaccgactg agccaatcag ggcatatgtt
     1141 gctaaactta agtcgtggca agcaagattt tttaaaagag gttgttgaaa cttttgccaa
     1201 caaaagcggg cagtctgtgt tatataatgc tctgttttct agtcagtcat ctaaggatac
     1261 atcttttctt ggtagcgatg atattggaaa cattgatgta caagaaccag agcttgaaga
     1321 tttggctaga tacgatgttg gtgctattca agcacataat ggtagtcttc agcaccttac
     1381 ttggcttggc ttacagtgga attcattgcc tgctttacct ggaatccgaa aatggctaaa
     1441 acagcttttc catcatttgc cccaggaaac ctcaaggctt gaaacaaatg cacctgaatc
     1501 aatatgtatt ttagatcttg aagtatttct ccttggagta gtatatacca gccacttaca
     1561 attaaaggag aaatgtaatt ctcaccacag ctcctatcag ccgttatgcc tgccccttcc
     1621 tgtgtgtaaa cggctttgta cagagagaca aaaatcttgg tgggatgcgg tttgtactct
     1681 gattcacaga aaagcagtac ctggaaactc agcagaattg agacttgtag ttcagcatga
     1741 aataaacact ctaagagccc aggaaaaaca tggccttcaa cctgctctgc ttgtacattg
     1801 ggcaaaatgc cttcagaaaa tgggcagggg tcttaattct tcttatgatc aacaagaata
     1861 catagggaga agtgttcatt attggaagaa agttttgcca ttgttgaaga taataaagaa
     1921 gaacagtatt cctgaaccta ttgatcctct gtttaaacat tttcatagtg tagacattca
     1981 ggcatcagaa attgttgagt atgaagaaga tgcacacata acttttgcta tattggatgc
     2041 agtacatgga aatatagaag atgctgtgac tgcttttgaa tctataaaaa gtgttgtttc
     2101 ttattggaat cttgcactga tttttcacag gaaagcagaa gacattgaaa atgatgccgt
     2161 ttttcctgaa gaacaagaag aatgcaaaaa ttatctgaga aagaccaggg actacctaat
     2221 aaagattata gatgacagtg attcaaatct ttcagtggtc aagaaattgc ctgtgcccct
     2281 ggagtctgta aaagagatgc ttaagtcagt catgcaggaa ctcgaagact atagtgaagg
     2341 aggtcctctc tataaaaatg gttctttgcg aaatgcagat tcagaaataa aacattctac
     2401 accatctcct accaaatatt cactatcacc aagtaaaagt tacaagtatt ctcccaaaac
     2461 accacctcga tgggcagaag atcagaattc tttacggaaa atgatttgcc aagaagtaaa
     2521 ggccattacg aaactaaata gcagtaagtc agcatcccgt catcgttggc ccacagagaa
     2581 ttatggacca gactcggtgc ctgatggata tcaggggtca cagacatttc atggggctcc
     2641 actaacagtt gcaactactg gcccttcagt atattatagt cagtcaccag catataattc
     2701 ccagtatctt ctcagaccag cagctaatgt tactcccaca aagggttctt ctaatacaga
     2761 atttaagtca accaaagaag gattttccat cgctgtgtct gctgatggat ttaaatttgg
     2821 catttcggaa ccaggaaatc aagaaaagaa aagtgaaaag cctcttgaaa atgatactgg
     2881 cttccaggct caggatatta gtggccagaa gaatggccgt ggtgtgattt ttggccaaac
     2941 aagtagcact tttacatttg cagatgttgc aaaatcaact tcaggagaag gatttcagtt
     3001 tggcaaaaaa gaccccaatt tcaagggatt ttcaggtgct ggagaaaaat tattctcatc
     3061 acaatgcggt aaaatggcca ataaagcaaa cacttccggt gactttgaga aagatgatga
     3121 tgcctgtaag actgaggaca gcgatgacat ccattttgaa ccagtagttc aaatgcctga
     3181 aaaagtagaa cttgtaacag gagaagaagg tgaaaaagtt ctgtattcac agggggtaaa
     3241 actatttaga tttgatgctg agataagtca gtggaaagaa aggggcttgg ggaacttaaa
     3301 aattctcaaa aatgaggtca atggcaaacc aagaatgctg atgcgaagag accaagtact
     3361 aaaagtgtgt gctaatcatt ggataacaac tacaatgaac ctgaagcccc tctctggatc
     3421 agatagagca tggatgtggt tagccagtga tttctctgat ggtgatgcca aactagagcg
     3481 gttggcagca caatttaaaa caccagagct ggctgaagaa ttcaagcaga aatttgagga
     3541 atgccagcgg cttctgttag acataccact tcaaactccc cataaacttg tagatactgg
     3601 cagagctgcc aagctaatac agagagctga agaaatgaag agtggactga aagatttcaa
     3661 aacgtttttg acaaatgatc aaacaaaagt cactgaggaa gaaaataagg gttcaggtac
     3721 aggtgcagcc ggtgcctcag acacaacaat aaaacccaat cctgaaaaca ctgggcccac
     3781 attagaatgg gataactatg atttaaggga agatgctttg gatgataatg ttagtagtag
     3841 ctcagtacat gattctccgt tggcaagtag ccctgtgaga aaaaatattt tccgctttga
     3901 tgagtcaaca acaggattta acttcagttt taaatctgct ttgagtctat ctaagtctcc
     3961 tgccaagttg aatcagagtg ggacttcagt tggcactgat gaagaatctg atgttactca
     4021 agaagaagag agagatggac agtactttga acctgttgtt cctttacctg atctagttga
     4081 agtatccagt ggtgaggaaa atgaacaagt tgtttttagt cacagggcag aactctacag
     4141 atatgataaa gatgttggtc aatggaaaga aaggggcatt ggtgatataa agattttaca
     4201 gaattatgat aataagcaag ttcgtatagt gatgagaagg gaccaagtat taaaactttg
     4261 tgccaatcac agaataactc cagacatgag tttgcaaaat atgaaaggga cagaaagagt
     4321 atgggtgtgg actgcatgtg attttgcaga tggagaaaga aaagtagagc atttagctgt
     4381 tcgttttaaa ctacaggatg ttgcagactc atttaagaaa atttttgatg aagcaaaaac
     4441 agcccaggaa aaagattctt tgataacacc tcatgtttct cggtcaagca ctcccagaga
     4501 gtcaccatgt ggcaaaattg ctgtagctgt attagaagaa accacaagag agaggacaga
     4561 tgttattcag ggtgatgatg tagcagatgc agcttcagaa gttgaagtgt ctagcacatc
     4621 tgaaacaaca acaaaagcag tggtttctcc tccaaagttt gtatttggtt cagagtctgt
     4681 taaaagaatt tttagtagtg aaaaatcaaa cccatttgca tttggcaaca gttctgccac
     4741 tgggtctttg tttggattta gttttaatgc acctttgaaa agtaacgata gtgaaactag
     4801 ttcagtagcc cagagtggat ctgaaagcaa agtggaacct aaaaaatgtg aactgtcaaa
     4861 gaactctgat atcgaacagt cttcagatag caaagtcaaa aatctctctg cttcctttcc
     4921 aatggaagaa tcttcaatca actacacatt taaaacacca gaaaaggcaa aagagaagaa
     4981 aaaacctgaa gattctccct cagatagtct cggtctcctg acctcgtgat ccacccgcct
     5041 cggcctccca aagtgctggg attacaggca tgagccactg cgcctggctg acacatgtct
     5101 taattctggt attcaccaga tttgtttcgt gttctccgtt gttagtcatc aaatttgtct
     5161 actttttaaa tagaaacatt agctagagca aggaacttag aaacactcaa gcagcactga
     5221 atgtgtagaa ttgcataacc aatatagctt ctttgctttc atatttacaa ttagttggag
     5281 ttttagttca gccgtaccca gtatcttcca ttctgcttcc aggaagaaat ggaaaaatgt
     5341 cagccatgat gatgcagtat tttagtagca agttgatggt gttttggttt cccatgggaa
     5401 atattgtcac tggagcatta gcagctatcg gtcacttatt agggtaaaaa agcaacttca
     5461 gaagaattta acatatgcca aagaatcaac aaaggaagta atcagccagg gcaaaggtcg
     5521 cacaagagat tgtaatctag caatcagcag tggaataagc agtcagctta ccagaaaccc
     5581 aggaaaatgc tttagaaagg gcagtcagga ctaaggcaat ttaatgaaat gcaaaataaa
     5641 tgaaatctga agtttaaaaa tctagattac aattctggtt tctaactcag ttatgagacc
     5701 ttgggcaaag tcattaaatt tctctgaact tcagattttt gggagtcaat aaaccaatac
     5761 atgtcaaagg gcccgataaa ctttacagtt tagaccaggc gtggtgtctc acccctgcaa
     5821 tctcagcact ttgggag
//
