LOCUS       XM_011532845            6907 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens RANBP2 like and GRIP domain containing 1
            (RGPD1), transcript variant X1, mRNA.
ACCESSION   XM_011532845
VERSION     XM_011532845.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000002.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011532845.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6907
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
     gene            1..6907
                     /gene="RGPD1"
                     /gene_synonym="RanBP2L2; ranBP2L6; RGP1; RGPD2"
                     /note="RANBP2 like and GRIP domain containing 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 42 ESTs, 389 long SRA reads, 11 Proteins, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:400966"
                     /db_xref="HGNC:HGNC:32414"
                     /db_xref="MIM:612704"
     CDS             73..5478
                     /gene="RGPD1"
                     /gene_synonym="RanBP2L2; ranBP2L6; RGP1; RGPD2"
                     /codon_start=1
                     /product="RANBP2-like and GRIP domain-containing protein 1
                     isoform X1"
                     /protein_id="XP_011531147.1"
                     /db_xref="GeneID:400966"
                     /db_xref="HGNC:HGNC:32414"
                     /db_xref="MIM:612704"
                     /translation="MLVKWYNVHSAPGGPSYHSEWNLFVTCLMNVMGFNTDRLAWTRN
                     FDFEGSLSPVIAPKKARPSETGSDDKLRGFYFAKLYYEAKEYDLAKKYVCTYLSVQER
                     DPRAHRFLGLLYELEENTEKAVECYRRSLELNPPQKDLVLKIAELLCKNDVTDGRAKY
                     WVERAAKLFPGSPAIYKLKEHLLDCEGEDGWNKLFDWIQSELYVRPDDVHMNIRLVEL
                     YRSNKRLKDAVARCHEAERNIALRSSLEWNSCVVQTLKEYLESLQCLESDKSDWRATN
                     TDLLLAYANLMLLTLSTRDVQESRELLESFDSALQSAKSSLGGNDELSATFLEMKGHF
                     YMHAGSLLLKMGQHGNNVQWQALSELAALCYVIAFQVPRPKIKLIKGEAGQNLLEMMA
                     CDRLSQSGHMLLNLSRGKQDFLKEVVETFANKSGQSVLYNALFSSQSSKDTSFLGSDD
                     IGNIDVQEPELEDLARYDVGAIQAHNGSLQHLTWLGLQWNSLPALPGIRKWLKQLFHH
                     LPQETSRLETNAPESICILDLEVFLLGVVYTSHLQLKEKCNSHHSSYQPLCLPLPVCK
                     RLCTERQKSWWDAVCTLIHRKAVPGNSAELRLVVQHEINTLRAQEKHGLQPALLVHWA
                     KCLQKMGRGLNSSYDQQEYIGRSVHYWKKVLPLLKIIKKNSIPEPIDPLFKHFHSVDI
                     QASEIVEYEEDAHITFAILDAVHGNIEDAVTAFESIKSVVSYWNLALIFHRKAEDIEN
                     DAVFPEEQEECKNYLRKTRDYLIKIIDDSDSNLSVVKKLPVPLESVKEMLKSVMQELE
                     DYSEGGPLYKNGSLRNADSEIKHSTPSPTKYSLSPSKSYKYSPKTPPRWAEDQNSLRK
                     MICQEVKAITKLNSSKSASRHRWPTENYGPDSVPDGYQGSQTFHGAPLTVATTGPSVY
                     YSQSPAYNSQYLLRPAANVTPTKGSSNTEFKSTKEGFSIAVSADGFKFGISEPGNQEK
                     KSEKPLENDTGFQAQDISGQKNGRGVIFGQTSSTFTFADVAKSTSGEGFQFGKKDPNF
                     KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELV
                     TGEEGEKVLYSQGVKLFRFDAEISQWKERGLGNLKILKNEVNGKPRMLMRRDQVLKVC
                     ANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFKQKFEEC
                     QRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVTEEENKGSG
                     TGAAGASDTTIKPNPENTGPTLEWDNYDLREDALDDNVSSSSVHDSPLASSPVRKNIF
                     RFDESTTGFNFSFKSALSLSKSPAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPL
                     PDLVEVSSGEENEQVVFSHRAELYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRR
                     DQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDVADSF
                     KKIFDEAKTAQEKDSLITPHVSRSSTPRESPCGKIAVAVLEETTRERTDVIQGDDVAD
                     AASEVEVSSTSETTTKAVVSPPKFVFGSESVKRIFSSEKSNPFAFGNSSATGSLFGFS
                     FNAPLKSNDSETSSVAQSGSESKVEPKKCELSKNSDIEQSSDSKVKNLSASFPMEESS
                     INYTFKTPEKEPPLWHAEFTKEELVQKLSSTTKSADQLNGLLRETEATSAVLMEQIKL
                     LKSEIRRLERNQEESAANVEHLKNVLLQFIFLKPGSERESLLPVINTMLQLSPEEKGK
                     LAAVAQGLQETSIPKKK"
ORIGIN      
        1 ggcggcctgg cctaagtaca aacgtgtttg caaacaatta agtttatcct gccaaaagaa
       61 atagcagttc agatgcttgt caagtggtac aatgtccaca gtgctccagg aggacccagt
      121 tatcactcag agtggaattt atttgtgact tgtctcatga acgtgatggg ttttaacaca
      181 gaccgcttag catggactag aaattttgac tttgaaggat cactttcccc tgtcattgca
      241 cccaaaaaag caaggccttc tgagactgga tctgatgata agttgagagg attctatttt
      301 gcaaagctgt attatgaagc taaagaatat gatcttgcta aaaaatacgt atgtacttac
      361 cttagtgtgc aagagaggga tcccagagct cacagatttc tgggtcttct ttatgaattg
      421 gaagaaaaca cagagaaagc cgttgaatgt tacaggcgtt cactggaatt aaacccacca
      481 caaaaagatc ttgtgttgaa gattgcagaa ttgctttgta aaaatgatgt tactgatgga
      541 agagcaaaat actgggttga aagggcagcg aaacttttcc caggaagtcc tgcaatttat
      601 aaactaaagg aacatcttct agattgtgaa ggtgaagatg gatggaataa actttttgac
      661 tggattcagt cagaacttta tgtaagacct gatgacgtcc atatgaacat ccggctagtg
      721 gagttgtatc gctcaaataa aagattgaag gatgctgtgg cccgctgcca tgaggcagag
      781 aggaacatag ctttgcgttc aagtttagag tggaattcgt gtgttgtaca gacccttaag
      841 gaatatctgg agtctttaca gtgtttggag tctgataaaa gtgactggcg agcaaccaat
      901 acagacttac tgctggccta tgctaatctt atgcttctta cgctttccac tagagatgtg
      961 caggaaagta gagaattact ggaaagtttt gatagtgctc ttcagtctgc aaaatcttct
     1021 ttgggtggaa atgatgaact gtcagctact ttcttagaaa tgaaaggaca tttctacatg
     1081 catgctggtt ctctgctctt gaagatgggt cagcatggta ataatgttca atggcaagct
     1141 ctttctgagc tggctgcatt gtgctatgtc atagcatttc aggttccaag accaaagatt
     1201 aaattaataa aaggtgaagc tggacaaaat ctgctggaaa tgatggcctg tgaccgactg
     1261 agccaatcag ggcatatgtt gctaaactta agtcgtggca agcaagattt tttaaaagag
     1321 gttgttgaaa cttttgccaa caaaagcggg cagtctgtgt tatataatgc tctgttttct
     1381 agtcagtcat ctaaggatac atcttttctt ggtagcgatg atattggaaa cattgatgta
     1441 caagaaccag agcttgaaga tttggctaga tacgatgttg gtgctattca agcacataat
     1501 ggtagtcttc agcaccttac ttggcttggc ttacagtgga attcattgcc tgctttacct
     1561 ggaatccgaa aatggctaaa acagcttttc catcatttgc cccaggaaac ctcaaggctt
     1621 gaaacaaatg cacctgaatc aatatgtatt ttagatcttg aagtatttct ccttggagta
     1681 gtatatacca gccacttaca attaaaggag aaatgtaatt ctcaccacag ctcctatcag
     1741 ccgttatgcc tgccccttcc tgtgtgtaaa cggctttgta cagagagaca aaaatcttgg
     1801 tgggatgcgg tttgtactct gattcacaga aaagcagtac ctggaaactc agcagaattg
     1861 agacttgtag ttcagcatga aataaacact ctaagagccc aggaaaaaca tggccttcaa
     1921 cctgctctgc ttgtacattg ggcaaaatgc cttcagaaaa tgggcagggg tcttaattct
     1981 tcttatgatc aacaagaata catagggaga agtgttcatt attggaagaa agttttgcca
     2041 ttgttgaaga taataaagaa gaacagtatt cctgaaccta ttgatcctct gtttaaacat
     2101 tttcatagtg tagacattca ggcatcagaa attgttgagt atgaagaaga tgcacacata
     2161 acttttgcta tattggatgc agtacatgga aatatagaag atgctgtgac tgcttttgaa
     2221 tctataaaaa gtgttgtttc ttattggaat cttgcactga tttttcacag gaaagcagaa
     2281 gacattgaaa atgatgccgt ttttcctgaa gaacaagaag aatgcaaaaa ttatctgaga
     2341 aagaccaggg actacctaat aaagattata gatgacagtg attcaaatct ttcagtggtc
     2401 aagaaattgc ctgtgcccct ggagtctgta aaagagatgc ttaagtcagt catgcaggaa
     2461 ctcgaagact atagtgaagg aggtcctctc tataaaaatg gttctttgcg aaatgcagat
     2521 tcagaaataa aacattctac accatctcct accaaatatt cactatcacc aagtaaaagt
     2581 tacaagtatt ctcccaaaac accacctcga tgggcagaag atcagaattc tttacggaaa
     2641 atgatttgcc aagaagtaaa ggccattacg aaactaaata gcagtaagtc agcatcccgt
     2701 catcgttggc ccacagagaa ttatggacca gactcggtgc ctgatggata tcaggggtca
     2761 cagacatttc atggggctcc actaacagtt gcaactactg gcccttcagt atattatagt
     2821 cagtcaccag catataattc ccagtatctt ctcagaccag cagctaatgt tactcccaca
     2881 aagggttctt ctaatacaga atttaagtca accaaagaag gattttccat cgctgtgtct
     2941 gctgatggat ttaaatttgg catttcggaa ccaggaaatc aagaaaagaa aagtgaaaag
     3001 cctcttgaaa atgatactgg cttccaggct caggatatta gtggccagaa gaatggccgt
     3061 ggtgtgattt ttggccaaac aagtagcact tttacatttg cagatgttgc aaaatcaact
     3121 tcaggagaag gatttcagtt tggcaaaaaa gaccccaatt tcaagggatt ttcaggtgct
     3181 ggagaaaaat tattctcatc acaatgcggt aaaatggcca ataaagcaaa cacttccggt
     3241 gactttgaga aagatgatga tgcctgtaag actgaggaca gcgatgacat ccattttgaa
     3301 ccagtagttc aaatgcctga aaaagtagaa cttgtaacag gagaagaagg tgaaaaagtt
     3361 ctgtattcac agggggtaaa actatttaga tttgatgctg agataagtca gtggaaagaa
     3421 aggggcttgg ggaacttaaa aattctcaaa aatgaggtca atggcaaacc aagaatgctg
     3481 atgcgaagag accaagtact aaaagtgtgt gctaatcatt ggataacaac tacaatgaac
     3541 ctgaagcccc tctctggatc agatagagca tggatgtggt tagccagtga tttctctgat
     3601 ggtgatgcca aactagagcg gttggcagca caatttaaaa caccagagct ggctgaagaa
     3661 ttcaagcaga aatttgagga atgccagcgg cttctgttag acataccact tcaaactccc
     3721 cataaacttg tagatactgg cagagctgcc aagctaatac agagagctga agaaatgaag
     3781 agtggactga aagatttcaa aacgtttttg acaaatgatc aaacaaaagt cactgaggaa
     3841 gaaaataagg gttcaggtac aggtgcagcc ggtgcctcag acacaacaat aaaacccaat
     3901 cctgaaaaca ctgggcccac attagaatgg gataactatg atttaaggga agatgctttg
     3961 gatgataatg ttagtagtag ctcagtacat gattctccgt tggcaagtag ccctgtgaga
     4021 aaaaatattt tccgctttga tgagtcaaca acaggattta acttcagttt taaatctgct
     4081 ttgagtctat ctaagtctcc tgccaagttg aatcagagtg ggacttcagt tggcactgat
     4141 gaagaatctg atgttactca agaagaagag agagatggac agtactttga acctgttgtt
     4201 cctttacctg atctagttga agtatccagt ggtgaggaaa atgaacaagt tgtttttagt
     4261 cacagggcag aactctacag atatgataaa gatgttggtc aatggaaaga aaggggcatt
     4321 ggtgatataa agattttaca gaattatgat aataagcaag ttcgtatagt gatgagaagg
     4381 gaccaagtat taaaactttg tgccaatcac agaataactc cagacatgag tttgcaaaat
     4441 atgaaaggga cagaaagagt atgggtgtgg actgcatgtg attttgcaga tggagaaaga
     4501 aaagtagagc atttagctgt tcgttttaaa ctacaggatg ttgcagactc atttaagaaa
     4561 atttttgatg aagcaaaaac agcccaggaa aaagattctt tgataacacc tcatgtttct
     4621 cggtcaagca ctcccagaga gtcaccatgt ggcaaaattg ctgtagctgt attagaagaa
     4681 accacaagag agaggacaga tgttattcag ggtgatgatg tagcagatgc agcttcagaa
     4741 gttgaagtgt ctagcacatc tgaaacaaca acaaaagcag tggtttctcc tccaaagttt
     4801 gtatttggtt cagagtctgt taaaagaatt tttagtagtg aaaaatcaaa cccatttgca
     4861 tttggcaaca gttctgccac tgggtctttg tttggattta gttttaatgc acctttgaaa
     4921 agtaacgata gtgaaactag ttcagtagcc cagagtggat ctgaaagcaa agtggaacct
     4981 aaaaaatgtg aactgtcaaa gaactctgat atcgaacagt cttcagatag caaagtcaaa
     5041 aatctctctg cttcctttcc aatggaagaa tcttcaatca actacacatt taaaacacca
     5101 gaaaaggagc ctccattatg gcatgctgaa tttaccaaag aagaattggt tcagaagctc
     5161 agttccacca caaaaagtgc agatcagtta aacggcctgc ttcgggaaac agaggcaacc
     5221 agtgcagtcc ttatggagca aattaagctt ctcaaaagtg aaataagaag attggaaagg
     5281 aatcaagagg agtctgcagc taacgtggaa cacttgaaga acgtcttgct gcagttcatt
     5341 ttcttgaagc caggtagtga gagagagagc cttcttcctg ttataaatac gatgttgcag
     5401 ctcagccctg aagaaaaggg aaaacttgct gcggttgctc aaggtcttca agaaacctcc
     5461 atacccaaga aaaaatagaa agcaaccatg ttctactatg gtgccaaaaa tagttgaaca
     5521 tcgacatcaa aaagattctt tctgtctgct tattcacata ttctggtttg aattaaaagt
     5581 gatgaaatta tcctaaatac agttggccct ctgtatccat gggttccaca tccacaaatt
     5641 caaccaactg tggatggaaa agacttgaaa aagatgagag aaaataacaa tatgacaata
     5701 aaacataata caaataaaaa caatacagta taacaacgat tacatagcat ttacattata
     5761 ttagggattg cacaagagaa ggtatgtagg ttatatgcaa atactgcacc attttacata
     5821 agggacttga gaagcatgga ttttggtagc cacaggggtc ctggaaccaa tccctcacag
     5881 acacagacgg acactttaca gtagatgaac acaaagatga aaggaaaagt ctgacctagg
     5941 tttgcgggga gaagtggaac tccatttttg acaggtgatg ccattttttg ttttggacat
     6001 cgtccctctg tagttctttc cattcccagt cttgcactct gaaagataca ctgaaggaaa
     6061 gtccacacag tggtcaaagt ctttcacaag acaccacgtg aaggtctgca cagcacagtc
     6121 acattgagaa aaagatctca tgcaccagac cccctgtttc tgctttctaa aagatcatct
     6181 tttgcacctg caaaaaggct gcagtaaact gggccattcc atactttgat tcatgtattc
     6241 aaatgctact tatgagctct ctgtgtattg agccccacca ggatgctggg gacacacggg
     6301 gcacagtgca gccagaggct tggccatcat agagctcaca ttctagtgga atcagacagg
     6361 ggggttacag gaaatattca agtaaacaat ataaaatgag atcacttgat gatacatgga
     6421 tacatgttac atacatgatg agacagagta agagaatggg gaaagggttt ttagatgggg
     6481 gaatggcagg cttttccgag gctgaaagag atccaaccca cttctatttc ttcaggctcc
     6541 cagtgatatg aaaaagtgcc aaacaggact ataaaattgt ggtctactgt aaatggtttg
     6601 cagtaaaagt tctcaaccag cttccactca accaactcac cagttagaca atgggccctc
     6661 tcctgtgttt aaaacagtcc ggtgcccacc tgggtccaca tgcagctggc aggtgtttgc
     6721 tagtgtgccc acccatgtct gttcccccca cgtgagttat gtgcttacaa cgagtcgttt
     6781 ctttgcattt tccaactttc ttacatttat atttaattaa agatgatcta aactgagaaa
     6841 tgaatgtgaa aagaaacaaa gctctttttt gtttggtttt taactaaatt aaatgttttt
     6901 aacaagt
//
