LOCUS       XM_017015000            9508 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens regulatory factor X3 (RFX3), transcript
            variant X14, mRNA.
ACCESSION   XM_017015000
VERSION     XM_017015000.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000009.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017015000.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9508
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
     gene            1..9508
                     /gene="RFX3"
                     /note="regulatory factor X3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 10 ESTs, 613 long SRA reads, 7 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:5991"
                     /db_xref="HGNC:HGNC:9984"
                     /db_xref="MIM:601337"
     CDS             451..2763
                     /gene="RFX3"
                     /codon_start=1
                     /product="transcription factor RFX3 isoform X6"
                     /protein_id="XP_016870489.1"
                     /db_xref="GeneID:5991"
                     /db_xref="HGNC:HGNC:9984"
                     /db_xref="MIM:601337"
                     /translation="MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQ
                     TVQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQ
                     VTTVVSSHSMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIE
                     MAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLD
                     PVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQ
                     QPMQQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFG
                     EVEISSLPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPT
                     DGTTITESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRP
                     IPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQA
                     ARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTL
                     EQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFH
                     LIRLLYDEYMFYLVEHRVAQATGETPIAVMGETNLVDEKNTPIMELFISKLLNFGDLN
                     AVSPGNLDKDEGSEVESEMDEELDDSSEPQAKREKTELSQAFPVGCMQPVLETGVQPS
                     LLNPIHSEHIVTSTQTIRQCSATGNTYTAV"
ORIGIN      
        1 ccctccccca cccctccccg tgcgagtgtc tccctctccc tctcgctctc tctctctctc
       61 cctctctctc tctcttttgt gagttatagc aaccgttgcc ttgtgaatca agcgccatag
      121 tcaccgtagt cctggcgact gttacccatc aacaacaact actcctctcc tcctcctcct
      181 cctcttcctc ctcctcctcc ccaccaccac catctccatc acccaccaac aacaccacaa
      241 taatccacag ccaaggccac ttggtcattc tggcatttta tggtagagaa tacgttgagt
      301 ttggctctgg aaggaatatg agcagccatg gaggatactc tagtttcttt gggaagataa
      361 acactcaatc tgctagttaa gagacaaagc tcaagagaaa taagctgaag ctgtaacctc
      421 catttcaaac ttgtggttct gcagaccatc atgcagacat cagagactgg gtcggacaca
      481 ggctcgacag tgaccttaca aacatctgtg gctagtcaag cagcagtgcc tacgcaggtg
      541 gtacagcaag taccagtaca acaacaggta cagcaggtac agactgtgca gcaggtacaa
      601 catgtctatc ccgctcaggt gcagtatgtg gaaggaagcg atactgtcta taccaatgga
      661 gcaatccgaa caacaacgta tccttacaca gagacacaga tgtacagcca aaatactgga
      721 gggaattact ttgatactca agggagttcc gcccaggtga ctaccgtggt ctcatcccac
      781 agtatggtgg gcactggtgg gattcagatg ggcgtcacag gaggacaact catcagcagc
      841 tctggaggaa cctatctgat cggcaactca atggagaatt ctggtcactc agtgacacac
      901 acaactcggg cctccccagc gacaattgaa atggcgattg agacgctgca aaagtctgac
      961 ggtctgtcca ctcacagaag ctctcttctc aacagccatc tccagtggct gttggacaat
     1021 tatgagacag cagaaggagt gagccttccc agaagcactc tgtacaacca ctaccttcga
     1081 cactgtcagg aacacaaact ggacccagtc aatgctgcct cttttggaaa attaataaga
     1141 tcaattttta tggggctacg aaccaggaga ttgggcacta gaggaaactc caaataccac
     1201 tactatggga ttcgtgtcaa gccagattcc cctcttaatc gtctgcaaga agacatgcag
     1261 tatatggcta tgagacaaca acccatgcaa cagaaacaaa ggtacaagcc tatgcagaaa
     1321 gtggatgggg ttgcagatgg tttcacagga agtggtcaac agacaggcac atctgttgag
     1381 caaactgtaa ttgcccaaag ccaacatcat caacagtttt tagatgcatc tcgagcactt
     1441 ccagagtttg gagaagttga aatctcttct ctgccagatg gtactacctt tgaggatatc
     1501 aagtcactgc agagtcttta tagagagcac tgtgaggcaa tattggacgt tgttgtgaat
     1561 cttcaattta gcctgataga aaaattgtgg caaacattct ggcgctattc tccctctact
     1621 ccaactgatg gcactaccat taccgaatcg agcaatctga gtgaaataga aagtcgactt
     1681 ccgaaagcaa agctgataac tctgtgcaaa catgagtcta tcctgaaatg gatgtgtaac
     1741 tgtgaccatg ggatgtacca ggctttggtg gagattctca tccccgacgt ccttagacct
     1801 attcctagtg ccttgaccca agccattcga aattttgcaa aaagccttga aggttggctt
     1861 tccaatgcca tgaacaatat tccacagaga atgatacaaa ccaaggttgc cgctgtaagt
     1921 gcctttgccc agactctgcg aagatacacg tcgcttaatc acctggccca ggcagctcgt
     1981 gcagtgcttc agaacacttc ccaaatcaac cagatgctta gtgacctcaa ccgtgtcgac
     2041 tttgccaatg tccaggagca ggcttcctgg gtgtgccagt gtgatgacaa catggttcag
     2101 agactagaaa cagacttcaa gatgactctt cagcagcaga gcaccctgga gcagtgggct
     2161 gcgtggcttg acaatgtgat gatgcaagca ctgaaaccct atgaaggaag acccagtttt
     2221 cctaaagccg ccaggcagtt tctgctaaaa tggtctttct acagctcaat ggttattcgg
     2281 gacttaacct tacgcagtgc tgctagcttt ggctccttcc acctgatccg tctactctac
     2341 gacgaatata tgttttactt agtagaacat cgtgttgctc aggcaacagg agagactcct
     2401 atagcagtca tgggcgagac aaaccttgta gatgaaaaaa atactcctat catggaactc
     2461 tttataagca aacttctgaa ttttggtgat ttaaatgccg tgtctcctgg aaatctggat
     2521 aaagatgaag gcagtgaagt agaaagtgaa atggatgaag aactggatga ctcttcagag
     2581 cctcaagcca aaagagagaa aacagagctg agccaggcat ttccagtggg ctgcatgcag
     2641 cctgttctcg agactggcgt gcaaccaagc ctcctgaatc caattcacag cgagcacatt
     2701 gtcacaagta ctcagactat cagacagtgc agcgctacag gaaataccta cactgcagtc
     2761 taaagaatat taaagcgtat ttttccagct tacattaacc ctgttgatat tgggcttaag
     2821 ttgaaaattt aataagcctg aaggtcgact gttgtcaaat tctatctgtg ctgaacatta
     2881 actttttgga gttgtgaaat ggaatgggtg tatgtatttt gccagatctt tttttttaac
     2941 gtaaacaaat tatttgcttc ttaataatga attttttccc ttagtttcag gtgtcaagaa
     3001 ggatttttac aacacttaat gtcaatgttt tgttttctta taattaaaaa gtaatttaca
     3061 ttttttgtag cttaaaatat tttattgttg attgttagtc ttggtgtatg atttcatgtg
     3121 taagtttttt aattagatgc acttctgtga aatatcaaaa gaaatgattt ttttgattta
     3181 cactggaggc atgcccattt ggcagcagat gcatcaaatt tgcttttgaa aggtgctttt
     3241 cattggacag aaccataaga cactattttg ataacatttt gagtatggag agagaataca
     3301 gagcattttt attatagtgc tagagggttt ggaaggtcat ctatttttct ctgaggaaaa
     3361 aatgagctgt acatttatca gttcagagta aatgacagaa ttgcaagaga ttatgctaat
     3421 atgtacataa tttgtgtaca taattattaa accatgttaa caatgcaagc ttccgttaaa
     3481 cattgaattt taactattat ttgcatacca attcctctgt ttaaagacta ctgattctgt
     3541 atttgggacc actgcacaga tgcattctgc tgttaagtgg gggctgttat agttagatac
     3601 tgaagcagaa aaaaaagact tgactttttt tttttaagtg tacatgctac ttatgctgag
     3661 ctggacatac aggaaaccat tccatttgga tgactttctt ttattccagg tctttttcct
     3721 aatagtagtt caatatgctg ctattataaa cgagaattta tagaatgcaa ggaatgtagc
     3781 aacctacata acgttatttc cttcaaaact atttcctggt ttctaaagta tgtggattta
     3841 aattgtaaac agaacctgaa ggcagtgtaa ctggcacacc tcactgttac ttatccccaa
     3901 ttctgtagga tttggatagg tggctggatg gaccattgcc attgaagaat gtacatcagg
     3961 gatcatcgta cctcggctat tacatggtgc cttaaaacag aactgaagct aaggtttagt
     4021 aaggtttatt ttgttcatgt gactaactct tcaatccatt tgacaaagtg tgcctgtcat
     4081 tttcagattc ctgaagtaag gacaggtgac atgttcttca aaggaaattt agggaaaaca
     4141 aaggaaaaca aaaagacaaa aatcagtttc cctctttgag tgaccgtgga tctatttttt
     4201 attcttagag ctgaatatta cttgattaca aatcagattg cttaagggtg tggaatagca
     4261 ggctagtttt aataccaact tgttaacata aaatcatata tgttttagac cattcttatt
     4321 tagttacaat tttagaaagt taacaaagta agcaggtact tatcgaagtg catcttttca
     4381 gtctaaatgt ttgtctgtgt gtctaggtgc tggtgagtcc acatggacac atgagtgccc
     4441 atggggcagg agtctgctat aaagtcagaa ggtgagatcc tagagagtta cacccagccc
     4501 cattttaatt tgcatgaaaa gccaaggttc ttttaagcac tcaaattatt taatgattaa
     4561 aacacaagaa aggcacatct gttcatttaa atagttgtaa aaaactaatc agcaaaaata
     4621 aatagataat aaagccaaaa aaaaggaaag cacaaaatga ttgacagatt atcaaatgag
     4681 gcctatatta aacccaagat gtttatcttt ccagtggtat tggggtaagg ggggtggggg
     4741 gttggaaaga cgaggtgagc cagtctgtaa agttagaaat accaaatggc ttatcgggta
     4801 atacacagtg tatttaagct gttgttgctt aattgcctca gactactcaa ataacatcaa
     4861 caacatttct taagtaaaat ttaaatattt tagatgtaat tttaaaaact gatccaaatt
     4921 ttttattata caactcactc atatatttga aagtcttcac tagcatagta gcatcacctt
     4981 catctaaatg tcatttaaat tactgtcccc ctttttcctc ccaaaaagac aatggatttg
     5041 taccaaaaca cacacaaaaa aggcaaacaa aacatgataa tctgcaaaag ttcatgtatc
     5101 tacttcattg tgcataggaa gtgtttacag gtaaaattaa aatcaaaaat tgaaaaaaca
     5161 ctcttcattt tggctctcct ttctgaattt tttcagtttc ctgtctctac ccgccatcct
     5221 ttgagtgata ctatatctgt attggaccaa atgtatttac tggtttcatt ttgtttattg
     5281 aatgacttta aatgtattta ttatcattgt ttaatttaat gttggatata tttgtatcat
     5341 tacaggaatc tggtaataat gggcaaattt agattgatga ggcttaggga tcggggatgc
     5401 tccaggattc aacatttctt ccaattgttc atggtttgtt ctaaattagg acagattaag
     5461 aactaataaa acattattac atttgaactt gactcaataa aaatattctg atctccttta
     5521 tgaatattag gaatattctt tgtgattagt gtaagtagtt tggatcaaaa cataaaaaga
     5581 agacctatgg tttatgctac ttctagttat ttgtagttca cagtaaaaca tgcacagaca
     5641 tacacacaaa cattttcatc aatttcgaat ttgaattgtg aaaaatatat aagaaaataa
     5701 aaacaattta tacatttgag caaattgagc aatcacattt attgcattta tttccctttt
     5761 tccctttttt cactcattga aagtgtgggt tttctaaata atattagaca ctaacactca
     5821 acagatttat tcacaaatga cacaagtaca cattttaaga cttctttgta tttcttgcaa
     5881 ttataaccaa tcactagtca tgaaatatac ctacataaac caagtcctac actttcagtg
     5941 aggaagaatg taaggaaggt atgttgactg ttttcaagtt tcagaaaaga tattttcata
     6001 tgataggatt gagtatcatg ggtatagttt gatcttgaca tatagtttga aaatcatact
     6061 caaaagattt gcattcatga aaccagtgaa caatagggtg gaatggatga accatctcct
     6121 tggaagacag ggcccaattt tcaatttttt ctttggctat caagttgcta gtcacttatt
     6181 caggattttc atccaaactg tgtttggact gactgtataa gtcttactgc cttttcagaa
     6241 atctgctttc ctttgtgtga tttttcttgt actgtatagc acggtttatg cacctctctt
     6301 tagatggtgt actttaaaaa caaaagtaaa atttagaaaa tggttttaac actgcatacc
     6361 taaaattagt agtgtgcagc attgactgcc tttgatttgt agtagacaag taaaaatgaa
     6421 tacgttcttg tagaatgctg taaaagttat tcaggaatga atacggtttt agtgccgtaa
     6481 tcatgaatct ttttatatga atgcactgtc taaaagtgct aaatgcattt tcaaattttt
     6541 aaaaattcct cagatgatat atttgaaatg tctaaaataa tgctgtgctt gaaacattag
     6601 tgtaaaagga aaaaaaaaat agtgtcactg tgatgttggt cctccctgtg tggacacaag
     6661 tagaaagaaa aaacttggca agtcaccttt gtgtacaatt tgaggcagtg gttatataca
     6721 ataaattgac ctttattata tcccccagac acacacattc ttggtgagaa aagaacaacc
     6781 atccagaaat tgagatgaga acttttgtga tctgtatgaa tcacagcaga tcatggggga
     6841 ggaggattgg catgcagtgc tgttgaaaat tgggcttgtt gttagatcag aacaacctcc
     6901 atgtatatgg ttagaacgaa tcaattaatg gaatcctagt atttctgcaa gtttggtgat
     6961 ttttaaaaac tggaatagaa gcattaattc agtgcttagt tctagtatta gaaaacccct
     7021 ttgatgtaat gccttgtatt aaccctttga gcattgtaag atatacaatg ggggacaaaa
     7081 gcctttcaga tcatttattt agacttagac cggtaaagta tactctatat ccaaatgtct
     7141 aattatgctg tttttttaaa ggggggggta ggaagagaaa gtgtttccac gccgaacact
     7201 tgcattttat atacaactct taatttttct tcaagagggc ttgatatatt tattcccaaa
     7261 tattcactgc catctaagta agtgtactgt ttacagaaaa aaaaaatcaa cttttctagt
     7321 atcacaccat agtctctaga aaaggaggac aaatacatgg gcctggatag acctatgtca
     7381 taactgattt ctgcacattg aaggtaccta gattgccttt aaaaggtata aagaaagggt
     7441 taagtttctt ttttttttgt cttttttttc ccaaaatgaa tcaaaagatc tcatttattt
     7501 agctttagaa agtacaagtg taagtaaagc cttaggaaga aaggagttcg agtggattaa
     7561 gagaatctga actctttggg ggcagttagg ctatttggag ttagatcgct cataaaatat
     7621 tgtttgcgaa tttcacacag ggcataattt tatctatgct ccaaaacttt aatacgttgt
     7681 caaaaaatta tatatagata gaatggagag caaagcactt gattttaagc tcatctgtca
     7741 ggagatgcta tgactactgc ttctgatatc tctaaatgtc agtctgctta caccattgct
     7801 gattttgttc aagggaatct cttcgtgcac ttgattccct ctgttccctg cgtgatcgaa
     7861 catgaaagca gtgttgtctg cagatgtgct tgcgctgccc tagctgggtg caaataagag
     7921 tgtaacctat tctgatgtct ggtgaaagga catccatagc atagtgcaag tatgccgtaa
     7981 acgttgcttt ttaggcagtt taggaagtca gaccatgcaa attactcatg tgttaacatg
     8041 caatactcaa agggttttaa tttaactctc ttcttttgaa ttcttcatga tgatttactg
     8101 taaatgcttc tcagtttgca tgccttgatc attgctgcta gtgattttat gtgccagtag
     8161 acctgagttt agtttaccaa ttttacttaa atagtaaaag ccacttacaa agtgactgcc
     8221 taggattttt ttttcctttc atttgaaata attgataata tgttttttta aaaagaaaaa
     8281 tgtgttttgt ctcttctttt atttggttct ggtttgattc tttttctccc ctctttcctt
     8341 tgtttttttt ttttaaataa attatgatgt tgggattgga agccctgagt aatgaaaatc
     8401 tttggtaaga attgtttatg tagctcaata acgaggacaa caaatattct ttagaagaat
     8461 tttgattctg gggaggaaag aaaatataaa aactcccatt gactgttgat aaccaagtaa
     8521 atttttcctt cagtaaatta gtatttttga agaaacgatc gccttgtttt aacttgctaa
     8581 acaacaattt taaatgaccc aataaagaat ctattgaact ttattcgttt aaaaagcatc
     8641 ttttgtacca aagcaaattt ttttctctac tcatttccat catcaatttg gacctatggt
     8701 ggtgaccaat gcattggtta cagaaacttt aagtgagtgc cttgagaaaa cttggaaatt
     8761 tgtgcctgag gtggtaaact tttaattagg ttaattgtag tgcttaccaa tcagtaactt
     8821 cactatcact cagggctttc gtaccttcta ggtaaaactt ctttcattgt gtttttttaa
     8881 gatactgtat ttttttttaa gtgccatcat ttaaatttca cttagtaagt ggcagattac
     8941 attattcagt cccacaagca cagaaacata gtaacactag gagatatttg aacatttatt
     9001 ttacaatcga ctgaatatat tatgtaaatg aggtaagcaa cttttgtaga gattgtatgt
     9061 gtgagataat gtaatgttct tttccagttt ttggactaca gttgaataaa ctttttaatt
     9121 atttaaaaac atctttaccg aataacatgt gatggttttt tgtataatgt atttgatttt
     9181 gtaaatacgt atttcctgat gtgatttttg tgagaaatgc taaatctttt agtatatcat
     9241 gtcctctcaa aattggcagg agctaaataa tagtttgtgg gcgatttgta ttgtgtactg
     9301 tacaataact ggggaacttt tataattata aaaatatata ttaactttta gtgtgttgtt
     9361 taaacaaatg actggaacat actaaagata ttagtaggat ttttctgaat atttcagact
     9421 tgaactcagg ctagctttct tgtgtttttc aaaacaaaat ggtgtcttgt cttttaaaat
     9481 caataaattt gtttccttgt tacaaata
//
