LOCUS       XM_047439196            4102 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens regulatory factor X2 (RFX2), transcript
            variant X1, mRNA.
ACCESSION   XM_047439196
VERSION     XM_047439196.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000019.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4102
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
     gene            1..4102
                     /gene="RFX2"
                     /note="regulatory factor X2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 33 ESTs, 191 long SRA reads, 9 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:5990"
                     /db_xref="HGNC:HGNC:9983"
                     /db_xref="MIM:142765"
     CDS             260..2431
                     /gene="RFX2"
                     /codon_start=1
                     /product="DNA-binding protein RFX2 isoform X1"
                     /protein_id="XP_047295152.1"
                     /db_xref="GeneID:5990"
                     /db_xref="HGNC:HGNC:9983"
                     /db_xref="MIM:142765"
                     /translation="MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGA
                     QMQPISLPRVQQVPQQVQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAP
                     SSTASYFEAPGGAQVTVAASSPPAVPSHSMVGITMDVGGSPIVSSAGAYLIHGGMDST
                     RHSLAHTSRSSPATLEMAIENLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRS
                     SLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDS
                     PLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGLHSTPEQTMAVQSQHH
                     QQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYI
                     EKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHIL
                     YQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFA
                     QTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCEESVVQR
                     LEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHAGSPSFPKAARQFLLKWSFYSSMVI
                     RDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEATGETPIAVMGEFNDLASLSLTL
                     LDKDDMGDEQRGSEAGPDARSLGEPLVKRERSDPNHSLQGI"
     polyA_site      4102
                     /gene="RFX2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atagagactg tagccgtgga gactgttact taccaacggg gaccaacacg cagcagccgc
       61 tgccgccgcc gcgggagccg ctgcccgaac tcccggcccg aactccaggc ggagttagaa
      121 cattccattt ttttatccaa aattatcttt tgctcggatt tgggaactga cttaatacgg
      181 agctgggaat ggagacacca aaaacagaac cagacaaagc tgagggtttg ttctcgcccc
      241 tcctggacag cacctgagca tgcagaattc cgagggtgga gcggattcgc cagcgtccgt
      301 ggctctgcgt ccctcggcgg cagccccgcc tgtgccagcc tccccgcaga gggtgttggt
      361 ccaggcagcc agctccaatc ccaaaggggc ccagatgcag ccgatctccc tccccagagt
      421 tcagcaggta ccccagcagg tgcagccggt gcagcacgtg tatcctgccc aggtgcagta
      481 cgtggaaggg ggagacgccg tctacaccaa tggagccata cgaacagcct acacctacaa
      541 ccccgagcct cagatgtacg cccccagcag cacggcttct tacttcgagg ccccaggcgg
      601 tgcccaggtg accgtggcag cctcgtcccc gccagcggtc ccctcccaca gcatggtggg
      661 catcaccatg gatgtcgggg ggagccccat cgtctccagc gcgggagcct atctcatcca
      721 cggggggatg gacagcacca gacactccct ggcccacacc tcccgctcat cgcccgccac
      781 gcttgaaatg gcgattgaaa acctccaaaa aagcgaagga atcacatcac acaaaagcgg
      841 tttactcaac agccatctcc agtggctgtt ggataattat gaaacagcgg aaggtgtgag
      901 tctccccaga agttctcttt acaaccacta ccttcggcac tgccaggagc acaagctaga
      961 cccagtgaac gccgcctcct tcgggaaact gatccgttct gtgtttatgg ggctgagaac
     1021 gcggcggctg ggcaccaggg gcaactcgaa gtaccattac tatgggattc gtctgaagcc
     1081 ggactcacca ctgaaccggc tgcaggagga cacgcagtac atggccatgc ggcagcagcc
     1141 catgcaccag aagcccaggt accggccagc ccagaagacg gacagcctcg gggacagcgg
     1201 ctcccacagc ggcctgcaca gcactccgga acagaccatg gccgtgcaga gccagcacca
     1261 ccagcagtac atagatgtct cccacgtctt ccccgagttc ccagcgcccg acctgggcag
     1321 cttcctgctg caggacggcg tcacactgca cgacgtcaag gccctgcagc tggtgtacag
     1381 acggcactgc gaggcaactg tagatgtggt gatgaacctc cagttccact acatcgagaa
     1441 gctgtggctc tccttctgga actctaaggc ctcctccagc gacggcccca cctctcttcc
     1501 tgccagtgac gaagaccccg agggcgccgt cctgcccaag gacaagctta tctccctgtg
     1561 tcagtgcgac cccatcctca ggtggatgag gagctgcgac cacatcctct accaggcgct
     1621 ggtggagatt ctcatccccg acgtgctgag gccggtcccc agtaccttga cacaggccat
     1681 ccgtaacttt gccaagagct tggaaggctg gttgacaaat gccatgagtg acttcccaca
     1741 acaggtcatc cagaccaagg tgggcgtcgt cagtgccttc gcccagacgc tgcggcgcta
     1801 cacgtccctc aaccacctgg cgcaggcggc ccgggcggtg ctgcagaaca cgtcccagat
     1861 caaccagatg ctcagcgacc tcaaccgcgt ggactttgcc aacgtgcagg agcaggcctc
     1921 gtgggtgtgc cagtgcgagg agagtgtggt gcagcggctg gagcaggatt tcaagctgac
     1981 cctgcagcag cagagctccc tggaccagtg ggccagctgg ctggacagtg tggtcaccca
     2041 ggtcctgaag cagcatgccg gcagccccag cttccccaag gccgcccggc agttcttgct
     2101 gaaatggtcc ttttacagct ccatggtgat ccgggacctg accctgcgca gcgctgccag
     2161 cttcggctcc ttccacctca tccgcctgct ctacgacgag tacatgttct acctggtgga
     2221 gcaccgcgtc gcggaggcca ccggagagac gccgatcgct gtgatgggag agttcaacga
     2281 tctcgcctct ctgtcgctga cgctgctcga caaagatgac atgggcgatg agcagcgtgg
     2341 cagcgaggcg ggcccagacg cccgcagcct gggtgagccc ctggtaaagc gggagcgcag
     2401 tgaccccaac cactccctgc agggcatcta gcagccccgg ccggcgcctc ctcgaggttc
     2461 caaaagatgc cgcctggtca ctctgggaac ctggatttca ccggctccac caaattagtg
     2521 cctcttagat gatgtgatgt ttactttgac tcaagcgggg gctcccgggg tcagtgttca
     2581 agaaggaaag cagttgttga agctacagaa gcccaggcca gggctcccac tggctgtagc
     2641 tgtgctctgg gtccccaggt ccctgcgcag ccaccagggc cccaccagac catgggttcc
     2701 ttattctgga caaaccctcc tctgctggaa ccctggactt tggccccagt ccctttaaga
     2761 gctgaaaggg ctgtgctgag agcactggcc tctgcactca actggaacca attttcacca
     2821 tgattttaaa aattaaaaaa acctggcaga gcccgactag aaagggacgg cctctcccct
     2881 cctacctgcc accgctgggg aggcacagag ctcgccagcg tccctggagt cccctcagga
     2941 atggaaagtg gagtgccctt gtctggtagc accatgtggg agggacccag ctgggcgcag
     3001 cgccctgtgg ccttttagat ccagacctcc ctgccggatg ccccgaggcg ggaggccggc
     3061 tgtgctgcag gaacccatct ccagatgcca aaggacttga ggggcagctg acaatcgctg
     3121 tgtcccggca gatccgcagc tcgaaaaaga acaagccaca gaaacgggct cgctcgtgcc
     3181 aggacacagc agtgtctttc aaaaaatcaa aaccagaagt tttatcagca gcaggaagga
     3241 tgtgggactc tgtccaagtt caccgtcacc atcaagccac tggctgtgga aggagtttgt
     3301 ccaacagggt cagtgtcaca gccacaactt cagaaagcag ccatcccgcg tgtcgtccaa
     3361 acagcagtgc ctgcgtcccg ctccacggag tcttccagaa cacctccctc tgaactaatc
     3421 ccggagcacc ccacccccag cgagtcccac ctggacctct tcaaagtcaa aactcttctc
     3481 tcgggacaaa caaatattcg ggactttcga agccctgaac ttgagacacc aagtttgtct
     3541 ccatggaaac acgtagccgc tgcagttgga cagctgcgtg ctggagttct gtccccaaac
     3601 caactgcaga gaagaaagac gagcctcggc ccaggacgcg atttctaacg aaatgcaata
     3661 gttttctctt tttggaaaaa tgtttatacc aatagttttg tgcgctaatt gttattagaa
     3721 cgtttcttat gaatgtgtac attgcagtat attcagtccc aaatgttttg ttctcattca
     3781 cacagaaggt actaatgtca gctcacgtgg cctttaaaaa cctacttccc cgcccgcagg
     3841 agctcagagc atcgctgggc ctgcgccaga gtgaggggtg caggaagaca aagacgcgtg
     3901 ctcactttag aaacgaaaag ctgggaataa tcacactgtt tgtctggtcg tatagcccaa
     3961 accttagttg aaatcagaca gaaagaatgt ctttaaaata tacatctcct ctccttggag
     4021 acactgaagc tcacagttaa cggattgtaa tgcccggctt ttcctcactc ctggtaacca
     4081 atacaagctg gtttctgcct ta
//
