LOCUS       XM_047441259            6770 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens RNA binding fox-1 homolog 2 (RBFOX2),
            transcript variant X30, mRNA.
ACCESSION   XM_047441259
VERSION     XM_047441259.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000022.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6770
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="22"
     gene            1..6770
                     /gene="RBFOX2"
                     /gene_synonym="dJ106I20.3; Fox-2; FOX2; fxh; HNRBP2;
                     HRNBP2; RBM9; RTA"
                     /note="RNA binding fox-1 homolog 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 52 ESTs, 2253 long SRA reads, 2 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 104 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:23543"
                     /db_xref="HGNC:HGNC:9906"
                     /db_xref="MIM:612149"
     CDS             220..1311
                     /gene="RBFOX2"
                     /gene_synonym="dJ106I20.3; Fox-2; FOX2; fxh; HNRBP2;
                     HRNBP2; RBM9; RTA"
                     /codon_start=1
                     /product="RNA binding protein fox-1 homolog 2 isoform X30"
                     /protein_id="XP_047297215.1"
                     /db_xref="GeneID:23543"
                     /db_xref="HGNC:HGNC:9906"
                     /db_xref="MIM:612149"
                     /translation="MMYLWGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ
                     DYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSE
                     SKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADA
                     DRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAAS
                     SFQADVSLGNDAAVPLSGRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVY
                     GAVRAVPPTAIPAYPGVDMQPTDMHSLLLQPQPPLLQPLQPLTVTVMAGCTQPTPTMP
                     LPLPLAMELALWRVYTEVATADLPPTEVT"
ORIGIN      
        1 agagaacaac agaacagtca gctggagcgg aggggggagg agaccagtct tttctttttt
       61 ttttttttag gattttttaa ctcaagtgat tttggggggt ttctccccac ctcaaactct
      121 tgccccccag ttttggcatc ttctttcctg tggttcactg aagtgccttt ttgcagtcca
      181 ggatccactg accgctgagt ttgagcagcc cgatctgaca tgatgtacct ctggggtaac
      241 caggagccga caacaactcc tgacgcaatg gttcagcctt ttactaccat cccatttcca
      301 ccacctccgc agaatggaat tcccacagag tatggggtgc cacacactca agactatgcc
      361 ggccagaccg gtgagcataa cctgacactc tacggaagta cgcaagccca cggggagcag
      421 agcagcaact cacccagcac acaaaatgga tctcttacgc agacagaagg tggagcacag
      481 acagacggcc agcagtcaca gacacaaagt agtgaaaatt cagagagtaa atctaccccg
      541 aaacggctgc atgtctctaa tattcctttc cgcttccggg accctgacct ccggcagatg
      601 tttgggcagt ttggcaaaat cctagatgta gaaataatct ttaatgaacg tggctctaag
      661 ggattcgggt tcgtaacttt cgagaatagt gctgatgcag acagggccag ggagaaatta
      721 cacggcaccg tggtagaggg ccgtaaaatc gaggtgaata atgctacagc acgtgtaatg
      781 accaataaga agatggtcac accatatgca aatggttgga aattaagccc agtagttgga
      841 gctgtatatg gtccggagtt atatgcagca tccagctttc aagcagatgt gtccctaggc
      901 aatgatgcag cagtgcccct atcaggaaga gggggtatca acacttacat tcctttaatc
      961 attcctggct tcccttaccc tactgcagcc accacggcag ccgctttcag aggagcccat
     1021 ttgaggggca gagggcggac agtatatggt gcagtccgag cggtacctcc aacagccatc
     1081 cccgcctatc caggggtgga tatgcagcct acagatatgc acagcctgct actgcaaccg
     1141 cagccaccgc tgctgcagcc gctgcagccg cttacagtga cggttatggc agggtgtaca
     1201 cagccgaccc ctaccatgcc cttgcccctg ccgctagcta tggagttggc gctgtggcga
     1261 gtttataccg aggtggctac agccgatttg ccccctactg aagtgacgtg agacccctgc
     1321 aaatgggaca gccccccagt tcatgaggcc tggctattgc aatatttact agtagaggaa
     1381 ctctatagca agatgaagag gaaaaacaaa caaacaaaca aaaaaaaaca caaaaaaaga
     1441 aagaatactt ttttatacct cactatgttc tttgaatatg tatttttcct ttaaatttct
     1501 gcctttaatt cttttgttcc aaagattgtg catttttttc tttttttttt taaactgtgg
     1561 taaaaaaaaa aaaaataatg catttccatg tctgtatgtc cgtgcttagc ttattctatc
     1621 aatcacggaa gaggcagtca aggaggaagg agagacatta ggagccgata aatgcatctg
     1681 atcagaaatc agcagacaga attaccaaag tgtatctggt gctgaatgac tgggggacaa
     1741 gcagaagtgg aagagatctt tctgcaacag gatattcttc tagtcttctg agtttctggt
     1801 ctttgacagg caattctggt tggctgtggc tggaatccac atgctgatag ataggaattt
     1861 gtgcttacaa agcaggagaa ttaaaaagac gctttcctct cctcttccct cctgtcttct
     1921 ccgttctttt tacaatcatc ttacacgcac agcctgagac agctggcata gtttttggaa
     1981 ttatagtatt gatatttcca aacgtgctct cagacagtgg ataataaaca cctcattagg
     2041 aaaccgatct cagaatgaac tctggagtat gaaaaagatc atttcttttt gttcctgtaa
     2101 cctagcattc cttctaggct tcttctcctt taattgaacc acagcttagc tcatgtattc
     2161 ttttattaac accctgctct catgtccata agattcagga atttaggacc cagggacaga
     2221 aaagtgaata agccagtgac cagatttccc ccagatgtct tgaggattag aagtacaaat
     2281 tgttgacagc cattaaagag ggtgaggaag ggaaaaggaa tattagaaga tctggtattt
     2341 cttacttttt tcttgcctca gaaagtacaa agtttaaaaa atagaataaa gaatctgctg
     2401 gggaaagata gagtaccagg tcctaggtca gtagtccctg gaagttttgg tgatgaggac
     2461 atggaagggc aggcagaggc actttgtact tgctccaaag ccataggaat tttcatcttc
     2521 cagagccttt atgagtcact tctctatcca cagtcttgag cctgtggcta tcccgctgag
     2581 cttctcactg tcctccaaaa acaccccgct gagcacccgg accactttgt acacattaac
     2641 actacaggac ataaaatgca gaggccctga gattgctgcc ctcccatatt ggaaggaggg
     2701 tctgcgatgg caagggtctt ctatatcacc agaaagagtc gcgcagtgag tcactgccgt
     2761 tgccatctgg ctgtaatttt ctatgttatc aaggtaggag ggagtgtttc tcttctagct
     2821 gttagataga actgataaaa gcaagtgtcc tacagcattt cccaaatgaa ggcattagga
     2881 aatagaaaag cacggtcttt ttggctccct ggtctagtca cattggtact agggtgacct
     2941 ttcacccaag ggacagctgc taaagggagt aattcagaga catggagctt ctggttatgg
     3001 gtttgttttg ggtttgtttt taactcctgc ctccacacat gttcttgact gataactgac
     3061 tcatgtccct gaattaaaat gactgaccta tgacagcatc aagcattctt tgtaagcaga
     3121 gtgatatatc tgagagggcg ttgacctgtt gtgtagaata catatccttt cccccttcag
     3181 aatcctgtct cgcctcgtaa ctgggagaga ggctgtgcct gaaactaggg gcgatgtcaa
     3241 ggaagctaga ggcctcgatg caattattac tgactctggg gaggaagaca gagaataagg
     3301 ggacaccaac tgcccagtcc actggccatt tttaagggtc cccccacccc aagccaaagt
     3361 ttggtttgtt gctgttaaga caatttttgt tgtatgtata taaatatttt agttagagga
     3421 gcggggaatg ggatgcgggc tttcacagtt ctagggaatg ggggcaggga ggattttgct
     3481 tttgcttttg ctttgaggga gaactttagc tgactaaaaa aacagaagtt tggggtcatg
     3541 atcacaaagg ggccattccc aaaagatggc aagccacgta ttcagtggag actaggccaa
     3601 attctaaatg gttttatcca tagcagggga gaataggaga atgagtttaa gagtttttct
     3661 cttctttttt cctagaaaga ggtaaggata atgggaaagg tagagaaggc ggctcccaca
     3721 gaccttttaa gagaggcaga atcttgagct tgaggcacct tgagtgcatc tcagttcagc
     3781 tggttctggc tgaggcctcc aaaggcaagc tctgtgcttt ccagtggttt ctgctgcatt
     3841 tccagggatg gtgtttaaca ccgcttcctc cagctccctt ttctaagaaa gaataaatgg
     3901 agttctgctt tttatgaaag ggtctttggt tttcagtgtc aacactgaga attggggctc
     3961 ttgcaagcat ctggatttca cagtatcaac ctccccgtca ccttttgaac tttgagactc
     4021 cgtacggtca acttcaccag aggcaggttg ctcgaagcag cactgcttgt ctgttcctga
     4081 ctctggttct cactgtatta aaaaagagag tcagaggagt ctggcatttc gtgagtttgt
     4141 tagaggatgc tggctgataa ttccagaaaa cttactgatg ctaaatcaca gtacatgcat
     4201 gattcttttt cagctttact atagttcatg acctggactt tctgtactct tggaagctgg
     4261 gctccttaaa ggaggcctct agtgaacacc tttatctcca tgtccctctt agagcccaga
     4321 gagctgccca taggcatttt ccagaattcc tcatgtcacc tagttcaatt tccattaact
     4381 cagatcagcc attgtgattc accatttgtc aggctctcag gtttaacaaa acctactatc
     4441 accatcatcc ttcaacagcc acagtctgaa ttgagccaac attttttttt ctttgagaaa
     4501 gaagtggact ggggcacaac ttttagtctg aggggagcta gtggaaatct agacaataga
     4561 agtcatcgat agcagctttt cctcaaatgt gtgactcctc aggggctaaa ctgctcttag
     4621 cttagaatta tgctttacta gagatctagc agataagtgg gttaatcact accatcctgt
     4681 aactagttat atagcttcca gacatgaggg agacatcaaa cagggatgga agcaacccca
     4741 aggatatgca agaagggcat gatgaacccc cttccctctg gcaggagaac aaggccaacc
     4801 aagggacaga ctggaaagca cttagatgtt taaggaggag aaaggggaag ctttgaccag
     4861 tccttgcctt ttgccaagtt cagccagttc tccgctgctt gcaacctcta gcgcagtaac
     4921 atttgcagaa ttgcagattt tcccccagat actaggagga aagggacttt ggggggtggg
     4981 gaaggggtcg tggtgtttta aaagcataag ttacctgttt gcactgtttt aagataggaa
     5041 aaaaaaatag tgggcaaggt gaacatcaga cgtaaatttg tgtgttttta ttttgtcatg
     5101 ctcttgaaaa tgtttgacca tttgtagtat acacagtgaa acttgattct ctgttgcata
     5161 aaacactata tttttttgga aatgttactg tccaaaagcc tcttccctcc ctttcctttt
     5221 cctatgtact tccttcatac ttgctttact gatcagccag gcaatagcca tccaagagct
     5281 agagcatgaa acagggccct ttccaagtag gctctgggtg tcctaagcca gcgtgtgccc
     5341 tctggtttag tgagtgtaat agagtccctg gcacctttct ttgcaaatga ggctaacaga
     5401 ccagactgca gcaagttatc agattcctca atcagatgca ctaggagtga ggagcccagg
     5461 gatggagggg gttcctgaag tattgcagtt ggctgtagta gctgagttct tttccatgtt
     5521 accgaaactg tagccagtta cagtttactc aggaaaacgg tagatcaatt cagccatggt
     5581 agtgctggtt ggcagggatt ggtaacggag agaactgctc atcagccaaa actcaagcct
     5641 tgccttttag gaggccacca gcagagggac ttggtcctcc ttgtctggta cttgtgtaca
     5701 tgccggtgac ctgaggactc cactcacact ggcgagcaaa aagggagcag tgattctctt
     5761 ttctctcccc accccctgcc ctttgttacc aacaccagtt tcccaggggg tacatgagtt
     5821 tctgaatttt taaaaaatgt ttttggtttg gtttttctgg ggactgataa gtgctttaag
     5881 caatgtccat accccgtcaa gactcccagc ttagtcattt tcttgtattt ttctgttcac
     5941 agtatttgtg tgtgtgcttg ttttggcagc tcattttggc tgtattatat attgagtgat
     6001 gaattgatcc tcttttttcc ctaagggata tgaattgttt ttcttgtgtt atattctgct
     6061 tgtgaatagc tggagcaaac ctggggctga cacgcgtaag ctagggctgc aaagcgagaa
     6121 gagagccggt ggagtgtact tgtccctgac aggctgacct acctgagtct ctgagctttt
     6181 cagtccaaat ctttgcaagg ctcaaaatgc cacagaacct ctcctcttct ccccactccc
     6241 catggcaggg accggaccat ccctacatgc aacatgctgt tcctccagcc cctcccattg
     6301 ccatggcaaa acaggtacct ttggggcatg ggggcattac atgggatgct tgtgtaatcg
     6361 accacctagc cttctctctc ccctcccgtc ctcccccaga atcacttcct aggacacccg
     6421 agctgcttgc ccagggtcct gtttccctgc taactccaga gaagcatccc agggctttgt
     6481 gacagtctct aattcccttc ccttctcgtt aagaatcata ttgtatagta gctttcagac
     6541 catacagtat tcattgggtt actcctatta ttatcaagta gctggaattg tgaaggtcgg
     6601 agtagttaga tctttagctt ttattcctta tttttttgta ttactctcca tgtgtataaa
     6661 ttattgatca tgttgctggc ttttataaac tctaagcgaa ggaggagcac tgcctcagcc
     6721 tttgcacatg gtaatgaagc actgttttta aataaaagag agaaacacca
//
