LOCUS       XM_005261429            7241 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens RNA binding fox-1 homolog 2 (RBFOX2),
            transcript variant X4, mRNA.
ACCESSION   XM_005261429
VERSION     XM_005261429.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000022.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_005261429.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7241
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="22"
     gene            1..7241
                     /gene="RBFOX2"
                     /gene_synonym="dJ106I20.3; Fox-2; FOX2; fxh; HNRBP2;
                     HRNBP2; RBM9; RTA"
                     /note="RNA binding fox-1 homolog 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     mRNAs, 53 ESTs, 2299 long SRA reads, 5 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 43 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:23543"
                     /db_xref="HGNC:HGNC:9906"
                     /db_xref="MIM:612149"
     CDS             400..1782
                     /gene="RBFOX2"
                     /gene_synonym="dJ106I20.3; Fox-2; FOX2; fxh; HNRBP2;
                     HRNBP2; RBM9; RTA"
                     /codon_start=1
                     /product="RNA binding protein fox-1 homolog 2 isoform X4"
                     /protein_id="XP_005261486.1"
                     /db_xref="GeneID:23543"
                     /db_xref="HGNC:HGNC:9906"
                     /db_xref="MIM:612149"
                     /translation="MAEGAQPHQPPQLGPGAAARGMKRESELELPVPGAGGDGADPGL
                     SKRPRTEEAAADGGGGMQNEPLTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIPFPP
                     PPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLTTEGGAQ
                     TDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG
                     SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLS
                     PVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTYIPLIIPGFPYPTAATTAA
                     AFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGFYGADLYIESANCFRSNRVDM
                     QPTDMHSLLLQPQPPLLQPLQPLTVTVMAGCTQPTPTMPLPLPLAMELALWRVYTEVA
                     TADLPPTEVT"
ORIGIN      
        1 ggaccgcccc cttcctccct cggccggcgt gctgtgaggg agagtgtgag ccagcgcggc
       61 cggtgggcga gctccgggag tgcgagaggc ggggcggcgc ggcgggccgg gccgggtttc
      121 gcgtgtgcgt gcgggggcgc gagcgagtgc tcatcacgac ccgccagtgg ccccgcgccg
      181 acaacccggc gggcgggcgg gcggggagca agcggtcagg caaggagcgg cggccgcgag
      241 gcgcggaggg gcgcggagtc cgctcgcgcg cacgcacgca cgcacgcggg ggcgggggca
      301 ggcgcgcgcc cgcctgtcgc gacagtcggg gccgaggccc agggggaggt ggcctgtcgc
      361 gggtcgcccg gctcccggag gcgagggggg cgcgggcgga tggcggaggg cgcccagccg
      421 catcagccgc ctcagctcgg gcccggcgcc gccgcccggg gcatgaagcg ggagtcggag
      481 ctggagctgc cggtgcccgg agcgggagga gacggagccg atcccggcct gagcaagcgg
      541 ccgcgcactg aggaggcggc ggccgacggt ggcggcggga tgcagaacga gcctctgact
      601 ccaggttatc atggattccc agcgcgggac agccagggta accaggagcc gacaacaact
      661 cctgacgcaa tggttcagcc ttttactacc atcccatttc caccacctcc gcagaatgga
      721 attcccacag agtatggggt gccacacact caagactatg ccggccagac cggtgagcat
      781 aacctgacac tctacggaag tacgcaagcc cacggggagc agagcagcaa ctcacccagc
      841 acacaaaatg gatctcttac gacagaaggt ggagcacaga cagacggcca gcagtcacag
      901 acacaaagta gtgaaaattc agagagtaaa tctaccccga aacggctgca tgtctctaat
      961 attcctttcc gcttccggga ccctgacctc cggcagatgt ttgggcagtt tggcaaaatc
     1021 ctagatgtag aaataatctt taatgaacgt ggctctaagg gattcgggtt cgtaactttc
     1081 gagaatagtg ctgatgcaga cagggccagg gagaaattac acggcaccgt ggtagagggc
     1141 cgtaaaatcg aggtgaataa tgctacagca cgtgtaatga ccaataagaa gatggtcaca
     1201 ccatatgcaa atggttggaa attaagccca gtagttggag ctgtatatgg tccggagtta
     1261 tatgcagcat ccagctttca agcagatgtg tccctaggca atgatgcagc agtgccccta
     1321 tcaggaagag ggggtatcaa cacttacatt cctttaatca ttcctggctt cccttaccct
     1381 actgcagcca ccacggcagc cgctttcaga ggagcccatt tgaggggcag agggcggaca
     1441 gtatatggtg cagtccgagc ggtacctcca acagccatcc ccgcctatcc aggtgtggtt
     1501 taccaggacg gattttacgg tgctgacctc tatatagaat ctgcaaactg cttcagatca
     1561 aacagggtgg atatgcagcc tacagatatg cacagcctgc tactgcaacc gcagccaccg
     1621 ctgctgcagc cgctgcagcc gcttacagtg acggttatgg cagggtgtac acagccgacc
     1681 cctaccatgc ccttgcccct gccgctagct atggagttgg cgctgtggcg agtttatacc
     1741 gaggtggcta cagccgattt gccccctact gaagtgacgt gagacccctg caaatgggac
     1801 agccccccag ttcatgaggc ctggctattg caatatttac tagtagagga actctatagc
     1861 aagatgaaga ggaaaaacaa acaaacaaac aaaaaaaaac acaaaaaaag aaagaatact
     1921 tttttatacc tcactatgtt ctttgaatat gtatttttcc tttaaatttc tgcctttaat
     1981 tcttttgttc caaagattgt gcattttttt cttttttttt ttaaactgtg gtaaaaaaaa
     2041 aaaaaataat gcatttccat gtctgtatgt ccgtgcttag cttattctat caatcacgga
     2101 agaggcagtc aaggaggaag gagagacatt aggagccgat aaatgcatct gatcagaaat
     2161 cagcagacag aattaccaaa gtgtatctgg tgctgaatga ctgggggaca agcagaagtg
     2221 gaagagatct ttctgcaaca ggatattctt ctagtcttct gagtttctgg tctttgacag
     2281 gcaattctgg ttggctgtgg ctggaatcca catgctgata gataggaatt tgtgcttaca
     2341 aagcaggaga attaaaaaga cgctttcctc tcctcttccc tcctgtcttc tccgttcttt
     2401 ttacaatcat cttacacgca cagcctgaga cagctggcat agtttttgga attatagtat
     2461 tgatatttcc aaacgtgctc tcagacagtg gataataaac acctcattag gaaaccgatc
     2521 tcagaatgaa ctctggagta tgaaaaagat catttctttt tgttcctgta acctagcatt
     2581 ccttctaggc ttcttctcct ttaattgaac cacagcttag ctcatgtatt cttttattaa
     2641 caccctgctc tcatgtccat aagattcagg aatttaggac ccagggacag aaaagtgaat
     2701 aagccagtga ccagatttcc cccagatgtc ttgaggatta gaagtacaaa ttgttgacag
     2761 ccattaaaga gggtgaggaa gggaaaagga atattagaag atctggtatt tcttactttt
     2821 ttcttgcctc agaaagtaca aagtttaaaa aatagaataa agaatctgct ggggaaagat
     2881 agagtaccag gtcctaggtc agtagtccct ggaagttttg gtgatgagga catggaaggg
     2941 caggcagagg cactttgtac ttgctccaaa gccataggaa ttttcatctt ccagagcctt
     3001 tatgagtcac ttctctatcc acagtcttga gcctgtggct atcccgctga gcttctcact
     3061 gtcctccaaa aacaccccgc tgagcacccg gaccactttg tacacattaa cactacagga
     3121 cataaaatgc agaggccctg agattgctgc cctcccatat tggaaggagg gtctgcgatg
     3181 gcaagggtct tctatatcac cagaaagagt cgcgcagtga gtcactgccg ttgccatctg
     3241 gctgtaattt tctatgttat caaggtagga gggagtgttt ctcttctagc tgttagatag
     3301 aactgataaa agcaagtgtc ctacagcatt tcccaaatga aggcattagg aaatagaaaa
     3361 gcacggtctt tttggctccc tggtctagtc acattggtac tagggtgacc tttcacccaa
     3421 gggacagctg ctaaagggag taattcagag acatggagct tctggttatg ggtttgtttt
     3481 gggtttgttt ttaactcctg cctccacaca tgttcttgac tgataactga ctcatgtccc
     3541 tgaattaaaa tgactgacct atgacagcat caagcattct ttgtaagcag agtgatatat
     3601 ctgagagggc gttgacctgt tgtgtagaat acatatcctt tcccccttca gaatcctgtc
     3661 tcgcctcgta actgggagag aggctgtgcc tgaaactagg ggcgatgtca aggaagctag
     3721 aggcctcgat gcaattatta ctgactctgg ggaggaagac agagaataag gggacaccaa
     3781 ctgcccagtc cactggccat ttttaagggt ccccccaccc caagccaaag tttggtttgt
     3841 tgctgttaag acaatttttg ttgtatgtat ataaatattt tagttagagg agcggggaat
     3901 gggatgcggg ctttcacagt tctagggaat gggggcaggg aggattttgc ttttgctttt
     3961 gctttgaggg agaactttag ctgactaaaa aaacagaagt ttggggtcat gatcacaaag
     4021 gggccattcc caaaagatgg caagccacgt attcagtgga gactaggcca aattctaaat
     4081 ggttttatcc atagcagggg agaataggag aatgagttta agagtttttc tcttcttttt
     4141 tcctagaaag aggtaaggat aatgggaaag gtagagaagg cggctcccac agacctttta
     4201 agagaggcag aatcttgagc ttgaggcacc ttgagtgcat ctcagttcag ctggttctgg
     4261 ctgaggcctc caaaggcaag ctctgtgctt tccagtggtt tctgctgcat ttccagggat
     4321 ggtgtttaac accgcttcct ccagctccct tttctaagaa agaataaatg gagttctgct
     4381 ttttatgaaa gggtctttgg ttttcagtgt caacactgag aattggggct cttgcaagca
     4441 tctggatttc acagtatcaa cctccccgtc accttttgaa ctttgagact ccgtacggtc
     4501 aacttcacca gaggcaggtt gctcgaagca gcactgcttg tctgttcctg actctggttc
     4561 tcactgtatt aaaaaagaga gtcagaggag tctggcattt cgtgagtttg ttagaggatg
     4621 ctggctgata attccagaaa acttactgat gctaaatcac agtacatgca tgattctttt
     4681 tcagctttac tatagttcat gacctggact ttctgtactc ttggaagctg ggctccttaa
     4741 aggaggcctc tagtgaacac ctttatctcc atgtccctct tagagcccag agagctgccc
     4801 ataggcattt tccagaattc ctcatgtcac ctagttcaat ttccattaac tcagatcagc
     4861 cattgtgatt caccatttgt caggctctca ggtttaacaa aacctactat caccatcatc
     4921 cttcaacagc cacagtctga attgagccaa catttttttt tctttgagaa agaagtggac
     4981 tggggcacaa cttttagtct gaggggagct agtggaaatc tagacaatag aagtcatcga
     5041 tagcagcttt tcctcaaatg tgtgactcct caggggctaa actgctctta gcttagaatt
     5101 atgctttact agagatctag cagataagtg ggttaatcac taccatcctg taactagtta
     5161 tatagcttcc agacatgagg gagacatcaa acagggatgg aagcaacccc aaggatatgc
     5221 aagaagggca tgatgaaccc ccttccctct ggcaggagaa caaggccaac caagggacag
     5281 actggaaagc acttagatgt ttaaggagga gaaaggggaa gctttgacca gtccttgcct
     5341 tttgccaagt tcagccagtt ctccgctgct tgcaacctct agcgcagtaa catttgcaga
     5401 attgcagatt ttcccccaga tactaggagg aaagggactt tggggggtgg ggaaggggtc
     5461 gtggtgtttt aaaagcataa gttacctgtt tgcactgttt taagatagga aaaaaaaata
     5521 gtgggcaagg tgaacatcag acgtaaattt gtgtgttttt attttgtcat gctcttgaaa
     5581 atgtttgacc atttgtagta tacacagtga aacttgattc tctgttgcat aaaacactat
     5641 atttttttgg aaatgttact gtccaaaagc ctcttccctc cctttccttt tcctatgtac
     5701 ttccttcata cttgctttac tgatcagcca ggcaatagcc atccaagagc tagagcatga
     5761 aacagggccc tttccaagta ggctctgggt gtcctaagcc agcgtgtgcc ctctggttta
     5821 gtgagtgtaa tagagtccct ggcacctttc tttgcaaatg aggctaacag accagactgc
     5881 agcaagttat cagattcctc aatcagatgc actaggagtg aggagcccag ggatggaggg
     5941 ggttcctgaa gtattgcagt tggctgtagt agctgagttc ttttccatgt taccgaaact
     6001 gtagccagtt acagtttact caggaaaacg gtagatcaat tcagccatgg tagtgctggt
     6061 tggcagggat tggtaacgga gagaactgct catcagccaa aactcaagcc ttgcctttta
     6121 ggaggccacc agcagaggga cttggtcctc cttgtctggt acttgtgtac atgccggtga
     6181 cctgaggact ccactcacac tggcgagcaa aaagggagca gtgattctct tttctctccc
     6241 caccccctgc cctttgttac caacaccagt ttcccagggg gtacatgagt ttctgaattt
     6301 ttaaaaaatg tttttggttt ggtttttctg gggactgata agtgctttaa gcaatgtcca
     6361 taccccgtca agactcccag cttagtcatt ttcttgtatt tttctgttca cagtatttgt
     6421 gtgtgtgctt gttttggcag ctcattttgg ctgtattata tattgagtga tgaattgatc
     6481 ctcttttttc cctaagggat atgaattgtt tttcttgtgt tatattctgc ttgtgaatag
     6541 ctggagcaaa cctggggctg acacgcgtaa gctagggctg caaagcgaga agagagccgg
     6601 tggagtgtac ttgtccctga caggctgacc tacctgagtc tctgagcttt tcagtccaaa
     6661 tctttgcaag gctcaaaatg ccacagaacc tctcctcttc tccccactcc ccatggcagg
     6721 gaccggacca tccctacatg caacatgctg ttcctccagc ccctcccatt gccatggcaa
     6781 aacaggtacc tttggggcat gggggcatta catgggatgc ttgtgtaatc gaccacctag
     6841 ccttctctct cccctcccgt cctcccccag aatcacttcc taggacaccc gagctgcttg
     6901 cccagggtcc tgtttccctg ctaactccag agaagcatcc cagggctttg tgacagtctc
     6961 taattccctt cccttctcgt taagaatcat attgtatagt agctttcaga ccatacagta
     7021 ttcattgggt tactcctatt attatcaagt agctggaatt gtgaaggtcg gagtagttag
     7081 atctttagct tttattcctt atttttttgt attactctcc atgtgtataa attattgatc
     7141 atgttgctgg cttttataaa ctctaagcga aggaggagca ctgcctcagc ctttgcacat
     7201 ggtaatgaag cactgttttt aaataaaaga gagaaacacc a
//
