LOCUS       NM_001204513             817 bp    mRNA    linear   PRI 14-FEB-2024
DEFINITION  Homo sapiens RBAK-RBAKDN readthrough (RBAK-RBAKDN), mRNA.
ACCESSION   NM_001204513
VERSION     NM_001204513.3
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 817)
  CONSRTM   Sanger Center; Genome Sequencing Center
  TITLE     Toward a complete human genome sequence
  JOURNAL   Genome Res 8 (11), 1097-1108 (1998)
   PUBMED   9847074
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Bonaldo,M.F., Lennon,G. and Soares,M.B.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC092032.5 and BM929719.1.
            
            On Jun 2, 2019 this sequence version replaced NM_001204513.2.
            
            Summary: This locus represents naturally occurring read-through
            transcription between the neighboring RBAK (RB-associated KRAB zinc
            finger) and LOC389458 (hypothetical LOC389458) genes on chromosome
            7. The read-through transcript encodes a protein that shares
            sequence identity with the upstream gene product but its C-terminal
            region is distinct due to frameshifts relative to the downstream
            gene. [provided by RefSeq, Mar 2011].
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BM929719.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1965299,
                                           SAMEA1966682 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            readthrough transcript :: includes exons from GeneID 57786, 389458
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-51                AC092032.5         118761-118811
            52-186              BM929719.1         1-135
            187-195             AC092032.5         130224-130232
            196-423             BM929719.1         145-372
            424-501             AC092032.5         145305-145382
            502-537             BM929719.1         451-486
            538-817             AC092032.5         145843-146122
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /map="7p22.1"
     gene            1..817
                     /gene="RBAK-RBAKDN"
                     /gene_synonym="hRBaK; RBAK; RBAK-LOC389458; ZNF769"
                     /note="RBAK-RBAKDN readthrough"
                     /db_xref="GeneID:100533952"
                     /db_xref="HGNC:HGNC:42971"
     exon            1..99
                     /gene="RBAK-RBAKDN"
                     /gene_synonym="hRBaK; RBAK; RBAK-LOC389458; ZNF769"
                     /inference="alignment:Splign:2.1.0"
     exon            100..158
                     /gene="RBAK-RBAKDN"
                     /gene_synonym="hRBaK; RBAK; RBAK-LOC389458; ZNF769"
                     /inference="alignment:Splign:2.1.0"
     CDS             144..485
                     /gene="RBAK-RBAKDN"
                     /gene_synonym="hRBaK; RBAK; RBAK-LOC389458; ZNF769"
                     /note="RBAK-LOC389458 readthrough; RB-associated KRAB zinc
                     finger protein; RB-associated KRAB repressor; Zinc finger
                     protein 769"
                     /codon_start=1
                     /product="RBAK-RBAKDN readthrough"
                     /protein_id="NP_001191442.1"
                     /db_xref="GeneID:100533952"
                     /db_xref="HGNC:HGNC:42971"
                     /translation="MNTLQGPVSFKDVAVDFTQEEWQQLDPDEKITYRDVMLENYSHL
                     VSVGYDTTKPNVIIKLEQGEEPWIMGGEFPCQHSPAALPAGHVAPAVAAAAAAPGRPG
                     PHRQSRSPPGC"
     exon            159..285
                     /gene="RBAK-RBAKDN"
                     /gene_synonym="hRBaK; RBAK; RBAK-LOC389458; ZNF769"
                     /inference="alignment:Splign:2.1.0"
     exon            286..381
                     /gene="RBAK-RBAKDN"
                     /gene_synonym="hRBaK; RBAK; RBAK-LOC389458; ZNF769"
                     /inference="alignment:Splign:2.1.0"
     exon            382..517
                     /gene="RBAK-RBAKDN"
                     /gene_synonym="hRBaK; RBAK; RBAK-LOC389458; ZNF769"
                     /inference="alignment:Splign:2.1.0"
     exon            518..817
                     /gene="RBAK-RBAKDN"
                     /gene_synonym="hRBaK; RBAK; RBAK-LOC389458; ZNF769"
                     /inference="alignment:Splign:2.1.0"
     regulatory      797..802
                     /regulatory_class="polyA_signal_sequence"
                     /gene="RBAK-RBAKDN"
                     /gene_synonym="hRBaK; RBAK; RBAK-LOC389458; ZNF769"
                     /note="hexamer: AATAAA"
     polyA_site      817
                     /gene="RBAK-RBAKDN"
                     /gene_synonym="hRBaK; RBAK; RBAK-LOC389458; ZNF769"
                     /note="major polyA site"
ORIGIN      
        1 actgccctcg cttcctgtgc gtcctcaggt caccgcttgc tctagttccc aggctttggc
       61 ctccagtgga cgagaatcgc ggagcctgcg gggctggagg tctaccagcc acagtctctg
      121 cacgtttcca agagcagcag aaaatgaaca cattgcaggg gccagtgtca ttcaaagatg
      181 tggctgtgga tttcacccag gaggagtggc agcagctgga ccctgatgag aagataactt
      241 acagggatgt gatgttggag aactatagcc atctagtttc tgtgggatat gataccacca
      301 agccaaacgt catcattaag ttggagcagg gagaggagcc gtggataatg ggaggtgaat
      361 ttccatgtca acatagtcca gccgccctgc ccgcaggcca tgtggccccc gctgttgctg
      421 ctgctgctgc tgctcccggc cgccccggtc cccaccgcca aagccgctcc ccacccggat
      481 gctaacaccc aggaaggcct tcagaacctg ctccaaggag tcggggctgg cggagacgga
      541 gagctgcggg cagactcaca cctggccccg ggctctggct gtattgatgg ggctgtggtg
      601 gccacgcgac cagaaagccg gggaggaaga cctgcggttc cgtgagaggc gtccagggct
      661 gcaggccacg gcgacaggct ccggggaaca tggggctttc cctgtccact cccaaggagt
      721 gtgggcctca acgcattggc aggggacggc cgtgtgccct ctccagaccc cacccccaga
      781 tgcatttatt agaaataata aagttctttc ttagcta
//
