LOCUS       XM_047429246            3738 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens paxillin (PXN), transcript variant X16,
            mRNA.
ACCESSION   XM_047429246
VERSION     XM_047429246.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000012.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3738
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
     gene            1..3738
                     /gene="PXN"
                     /note="paxillin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 74 ESTs, 1608 long SRA
                     reads, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 26 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:5829"
                     /db_xref="HGNC:HGNC:9718"
                     /db_xref="MIM:602505"
     CDS             102..1871
                     /gene="PXN"
                     /codon_start=1
                     /product="paxillin isoform X15"
                     /protein_id="XP_047285202.1"
                     /db_xref="GeneID:5829"
                     /db_xref="HGNC:HGNC:9718"
                     /db_xref="MIM:602505"
                     /translation="MDDLDALLADLESTTSHISKRPVFLSEETPYSYPTGNHTYQEIA
                     VPPPVPPPPSSEALNGTILDPLDQWQPSSSRFIHQQPQSSSPVYGSSAKTSSVSNPQD
                     SVGSPCSRVGEEEHVYSFPNKQKSAEPSPTVMSTSLGSNLSELDRLLLELNAVQHNPP
                     GFPADEANSSPPLPGALSPLYGVPETNSPLGGKAGPLTKEKPKRNGGRGLEDVRPSVE
                     SLLDELESSVPSPVPAITVNQGEMSSPQRVTSTQQQTRISASSATRELDELMASLSDF
                     KGLEQRADGERCWAAGWPRDGGRSSPGGQDEGGFMAQGKTGSSSPPGGPPKPGSQLDS
                     MLGSLQSDLNKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSR
                     NFFERDGQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGP
                     EGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTLWHPECFVCRECFTPFV
                     NGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQL
                     NKGTFKEQNDKPYCQNCFLKLFC"
ORIGIN      
        1 gttccgggcc gaggctcgcg gcggaaaagt tgcggggcat agacgagcgg ccccgggacg
       61 ggcagctagc gcgaccctga gccggcgccc gtggtccggc catggacgac ctcgacgccc
      121 tgctggcgga cttggagtct accacctccc acatctccaa acggcctgtg ttcttgtcgg
      181 aggagacccc ctactcatac ccaactggaa accacacata ccaggagatt gccgtgccac
      241 cccccgtccc cccacccccg tccagcgagg ccctcaatgg cacaatcctt gaccccttag
      301 accagtggca gcccagcagc tcccgattca tccaccagca gcctcagtcc tcatcacctg
      361 tgtacggctc cagtgccaaa acttccagtg tctccaaccc tcaggacagt gttggctctc
      421 cgtgctcccg agtgggtgag gaggagcacg tctacagctt ccccaacaag cagaaatcag
      481 ctgagccttc acccaccgta atgagcacgt ccctgggcag caacctttct gaactcgacc
      541 gcctgctgct ggaactgaac gctgtacagc ataacccgcc aggcttccct gcagatgagg
      601 ccaactcaag ccccccgctt cctggggccc tgagccccct ctatggtgtc ccagagacta
      661 acagcccctt gggaggcaaa gctgggcccc tgacgaaaga gaagcctaag cggaatgggg
      721 gccggggcct ggaggacgtg cggcccagtg tggagagtct cttggatgaa ctggagagct
      781 ccgtgcccag ccccgtccct gccatcactg tgaaccaggg cgagatgagc agcccgcagc
      841 gcgtcacctc cacccaacag cagacacgca tctcggcctc ctctgccacc agggagctgg
      901 acgagctgat ggcttcgctg tcggatttca agggcctgga gcaaagagcg gatggggagc
      961 ggtgctgggc ggccggctgg cctcgggacg gcgggcggag cagccccgga gggcaggacg
     1021 agggagggtt catggcccag gggaagacag ggagcagctc accccctggg gggcccccga
     1081 agcccgggag ccagctggac agcatgctgg ggagcctgca gtctgacctg aacaagctgg
     1141 gggtcgccac agtcgccaaa ggagtctgcg gggcctgcaa gaagcccatc gccgggcagg
     1201 ttgtgaccgc catggggaag acgtggcacc ccgagcactt cgtctgcacc cactgccagg
     1261 aggagatcgg atcccggaac ttcttcgagc gggatggaca gccctactgt gaaaaggact
     1321 accacaacct cttctccccg cgctgctact actgcaacgg ccccatcctg gataaagtgg
     1381 tgacagccct tgaccggacg tggcaccctg aacacttctt ctgtgcacag tgtggagcct
     1441 tctttggtcc cgaagggttc cacgagaagg acggcaaggc ctactgtcgc aaggactact
     1501 tcgacatgtt cgcacccaag tgtggcggct gcgcccgggc catcctggag aactatatct
     1561 cagccctcaa cacgctgtgg catcctgagt gctttgtgtg ccgggaatgc ttcacgccat
     1621 tcgtgaacgg cagcttcttc gagcacgacg ggcagcccta ctgtgaggtg cactaccacg
     1681 agcggcgcgg ctcgctgtgt tctggctgcc agaagcccat caccggccgc tgcatcaccg
     1741 ccatggccaa gaagttccac cccgagcact tcgtctgtgc cttctgcctc aagcagctca
     1801 acaagggcac cttcaaggag cagaacgaca agccttactg tcagaactgc ttcctcaagc
     1861 tcttctgcta ggtgccctgc ccctgtctct gccccccttc cccagccagc atccccaact
     1921 gcgactgtga cctagagact tcacccgggg gtgaaggggt aaacccgact gaaactggaa
     1981 cccttgtcct ccgctggtgc gggatggaca gagggccgtg aggggtcccc ctgcttgtct
     2041 tcacccctgc cagagcctct gggccccctc ctccctcctg tagctctccc taggctgccc
     2101 actctccatc ctccccaggg gtagaggctg ggggctccac cccagcccat gtacgtcccc
     2161 acgaactggc ctggccagca ccccacactg gagccatctc ttcctcatat ttcagcagtg
     2221 cagccggggg gcagggaagg gcaggcaggg tctgttgggg tctcttttta tccttattcc
     2281 tcccccgacc taattgtctt tgttctgtga ttattggggg acacccggct ccctccagac
     2341 aatgccagca taaatccatc catccaaagg cagagaacca aaggggccat ggaaggttct
     2401 ctgtgctcct cctacccttc cagtgcccta ggcctggcga ctgcccctgc cttttagacc
     2461 cgccctcccc ttttatacct gctcttgttc tactgagaaa agcctctcca gcaataatgt
     2521 tttctagtca cttcctccgt ctccgggacg gcgtgcctgg acactgtacc gactttgata
     2581 gatttctaca ctgaggtttg aattcatatc gcctgagttg cttttacttc tctatacaaa
     2641 atgattttga agagatttta aagacgttcc cttttgtatt ctcttcctca tccaccgcca
     2701 ctgggcctgt cactgatggt ggctctggtg tgaagtttgc tttgtactga gggttggggt
     2761 ggggaagcaa tttgtatttt attgtttctt agcacaagca ggtgaactgg gagcagctct
     2821 gtgactcccc ctctttcact tcatagctca ccaggactgt tttataaact gctgtatttg
     2881 gaaacccctt ctttacttcc caggccagca agctcttcac tgaaactggt tgaagggtgt
     2941 tgcacccttt tgggcctaga attctgaact ttatctgttc tgtttctgtg ggaggagaag
     3001 gggaagtatg ttttgggggg ctgcttcctg tctgagtaag ccctcaggag cctctgctcc
     3061 cctgtgaacc cactgaacct tctgagcccc cactgcttct atggggctct ctcttctgcc
     3121 ttctcaggaa agctggtgtc tgattttggc catcaggact ctgacgtctc tttggtcttg
     3181 ttgatttcct ctgggcatat cccttcccca gatctgctcc tcccctttca caggtgggat
     3241 cggcactcag ggggtctgga aagaaggtca taagggagca tgataggatt tggggcagag
     3301 ggacaggctc ctctggggaa accccccaga gctctttacc aaggatgaaa gaggagccag
     3361 gccttgggct cctgatgagg agaaaggggc cccaccgggg tctaatggtg acagtccaaa
     3421 ccactccact ggcctcctgg cagaagccga gtgtgctggg gtctccgaag agggtccctc
     3481 ctttttgggg gaaggtcagc ccagcccctc caaaggtctg atgtctccac tttcacccgc
     3541 aggccttacc gctctgttta tagtgaccca ccctagatct tccccaagag ggactggggt
     3601 ttctggggtc cattctctga gtcagtggtt atttgaaaat ttgattttga ttttattttt
     3661 tctctgtaaa cttccaagct ggcttttccc atttcaattc ctgtgattta tgccaataaa
     3721 gtttgcccat gattttca
//
