LOCUS       XM_047439162            6063 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens protein tyrosine phosphatase receptor type
            S (PTPRS), transcript variant X21, mRNA.
ACCESSION   XM_047439162
VERSION     XM_047439162.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000019.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6063
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
     gene            1..6063
                     /gene="PTPRS"
                     /gene_synonym="PTPSIGMA; R-PTP-S; R-PTP-sigma"
                     /note="protein tyrosine phosphatase receptor type S;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 59 ESTs, 666 long SRA reads, 11
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 12 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:5802"
                     /db_xref="HGNC:HGNC:9681"
                     /db_xref="MIM:601576"
     CDS             244..4797
                     /gene="PTPRS"
                     /gene_synonym="PTPSIGMA; R-PTP-S; R-PTP-sigma"
                     /codon_start=1
                     /product="receptor-type tyrosine-protein phosphatase S
                     isoform X16"
                     /protein_id="XP_047295118.1"
                     /db_xref="GeneID:5802"
                     /db_xref="HGNC:HGNC:9681"
                     /db_xref="MIM:601576"
                     /translation="MAPTWGPGMVSVVGPMGLLVVLLVGGCAAEEPPRFIKEPKDQIG
                     VSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDE
                     NVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASG
                     NPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYS
                     SPANLYVRVRRVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPED
                     DMPVGRNVLELTDVKDSANYTCVAMSSLGVIEAVAQITVKSLPKAPGTPMVTENTATS
                     ITITWDSGNPDPVSYYVIEYKSKSQDGPYQIKEDITTTRYSIGGLSPNSEYEIWVSAV
                     NSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIVQWEEPVEPNGLIRGYRVY
                     YTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQ
                     QGVPGQPMNLRAEARSETSITLSWSPPRQESIIKYELLFREGDHGREVGRTFDPTTSY
                     VVEDLKPNTEYAFRLAARSPQGLGAFTPVVRQRTLQSISPKNFKVKMIMKTSVLLSWE
                     FPDNYNSPTPYKIQYNGLTLDVDGRTTKKLITHLKPHTFYNFVLTNRGSSLGGLQQTV
                     TAWTAFNLLNGKPSVAPKPDADGFIMVYLPDGQSPVPVQSYFIVMVPLRKSRGGQFLT
                     PLGSPEDMDLEELIQDISRLQRRSLRHSRQLEVPRPYIAARFSVLPPTFHPGDQKQYG
                     GFDNRGLEPGHRYVLFVLAVLQKSEPTFAASPFSDPFQLDNPDPQPIVDGEEGLIWVI
                     GPVLAVVFIICIVIAILLYKNKPDSKRKDSEPRTKCLLNNADLAPHHPKDPVEMRRIN
                     FQTPDSGLRSPLREPGFHFESMLSHPPIPIADMAEHTERLKANDSLKLSQEYESIDPG
                     QQFTWEHSNLEVNKPKNRYANVIAYDHSRVILQPIEGIMGSDYINANYVDGYRCQNAY
                     IATQGPLPETFGDFWRMVWEQRSATIVMMTRLEEKSRIKCDQYWPNRGTETYGFIQVT
                     LLDTIELATFCVRTFSLHKNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFLRRVKTC
                     NPPDAGPIVVHCSAGVGRTGCFIVIDAMLERIKPEKTVDVYGHVTLMRSQRNYMVQTE
                     DQYSFIHEALLEAVGCGNTEVPARSLYAYIQKLAQVEPGEHVTGMELEFKRLANSKAH
                     TSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYI
                     ATQGPLAETTEDFWRMLWENNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDP
                     MAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTK
                     EQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQT
                     EDEYQFCYQAALEYLGSFDHYAT"
ORIGIN      
        1 agtgagtgtc ctcgcgccgc ccgcccggca gcccggccgg cgcgcgcacg ccgcgagccg
       61 ctggcgctcg ggctccgctc ggatcccatg caacagccac gatgtgaagc ggggcagagc
      121 cgggggagcc cagcccagcc agcctccaga cgttgcccca tctgacgctc ggctcgaggc
      181 ctctctgtga gggaccgggg ggccatcccc ctccagggcg gagatcggag gtcgctgcca
      241 agcatggcgc ccacctgggg ccctggcatg gtgtctgtgg ttggtcccat gggcctcctt
      301 gtggtcctgc tcgttggagg ctgtgcagca gaagagcccc ccaggtttat caaagaaccc
      361 aaggaccaga tcggcgtgtc ggggggtgtg gcctctttcg tgtgtcaggc cacgggtgac
      421 cccaagccac gagtgacctg gaacaagaag ggcaagaagg tcaactctca gcgctttgag
      481 acgattgagt ttgatgagag tgcaggggca gtgctgagga tccagccgct gaggacaccg
      541 cgggatgaaa acgtgtacga gtgtgtggcc cagaactcgg ttggggagat cacagtccat
      601 gccaagctta ctgtcctccg agaggaccag ctgccctctg gcttccccaa catcgacatg
      661 ggcccacagt tgaaggtggt ggagcggaca cggacagcca ccatgctctg tgcagccagc
      721 ggcaaccctg accctgagat cacctggttc aaggacttcc tgcctgtgga tcctagtgcc
      781 agcaatggac gcatcaaaca gctgcgatca ggagccctgc agattgaaag cagtgaggaa
      841 accgaccagg gcaaatatga gtgtgtggcc accaacagcg ccggcgtgcg ctactcctca
      901 cctgccaacc tctacgtgcg agtccgccgc gtggccccgc gcttctccat cctgcccatg
      961 agccacgaga tcatgccagg gggcaacgtg aacatcacct gcgtggccgt gggctcgccc
     1021 atgccatacg tgaagtggat gcagggggcc gaggacctga cccccgagga tgacatgccc
     1081 gtgggtcgga acgtgctgga actcacagat gtcaaggact cggccaacta cacctgcgtg
     1141 gccatgtcca gcctgggcgt cattgaggcg gttgctcaga tcacggtgaa atctctcccc
     1201 aaagctcccg ggactcccat ggtgactgag aacacagcca ccagcatcac catcacgtgg
     1261 gactcgggca acccagatcc tgtgtcctat tacgtcatcg aatataaatc caagagccaa
     1321 gacgggccgt atcagattaa agaggacatc accaccacac gttacagcat cggcggcctg
     1381 agccccaact cggagtacga gatctgggtg tcggccgtca actccatcgg ccaggggccc
     1441 cccagcgagt ccgtggtcac ccgcacaggc gagcaggccc cggccagcgc gccgcggaac
     1501 gtgcaagccc ggatgctcag cgcgaccacc atgattgtgc agtgggagga gccggtggag
     1561 cccaacggcc tgatccgcgg ctaccgcgtc tactacacca tggaaccgga gcaccccgtg
     1621 ggcaactggc agaagcacaa cgtggacgac agcctgctga ccaccgtggg cagcctgctg
     1681 gaggacgaga cctacaccgt gcgggtgctc gccttcacct ccgtcggcga cgggcccctc
     1741 tcggacccca tccaggtcaa gacgcagcag ggagtgccgg gccagcccat gaacctgcgg
     1801 gccgaggcca ggtcggagac cagcatcacg ctgtcctgga gccccccgcg gcaggagagt
     1861 atcatcaagt acgagctcct cttccgggaa ggcgaccatg gccgggaggt gggaaggacc
     1921 ttcgacccga cgacttccta cgtggtggag gacctgaagc ccaacacgga gtacgccttc
     1981 cgcctggcgg cccgctcgcc gcagggcctg ggcgccttca cccccgtggt gcggcagcgc
     2041 acgctgcagt ccatctcgcc caagaacttc aaggtgaaaa tgatcatgaa gacatcagtt
     2101 ctgctcagct gggagttccc tgacaactac aactcaccca caccctacaa gatccagtac
     2161 aatgggctca cactggatgt ggatggccgt accaccaaga agctcatcac gcacctcaag
     2221 ccccacacct tctacaactt tgtgctgacc aatcgcggca gcagcctggg cggcctccag
     2281 cagacggtca ccgcctggac tgccttcaac ctgctcaacg gcaagcccag cgtcgccccc
     2341 aagcctgatg ctgacggctt catcatggtg tatcttcctg acggccagag ccccgtgcct
     2401 gtccagagct atttcattgt gatggtgcca ctgcgcaagt ctcgtggagg ccaattcctg
     2461 accccgctgg gtagcccaga ggacatggat ctggaagagc tcatccagga catctcacgg
     2521 ctacagaggc gcagcctgcg gcactcgcgt cagctggagg tgccccggcc ctatattgca
     2581 gctcgcttct ctgtgctgcc acccacgttc catcccggcg accagaagca gtatggcggc
     2641 ttcgataacc ggggcctgga gcccggccac cgctatgtcc tcttcgtgct tgccgtgctt
     2701 cagaagagcg agcctacctt tgcagccagt cccttctcag accccttcca gctggataac
     2761 ccggaccccc agcccatcgt ggatggcgag gaggggctta tctgggtgat cgggcctgtg
     2821 ctggccgtgg tcttcataat ctgcattgtc attgctatcc tgctctacaa gaacaaaccc
     2881 gacagtaaac gcaaggactc agaaccccgc accaaatgcc tcctgaacaa tgccgacctc
     2941 gcccctcacc accccaagga ccctgtggaa atgagacgca ttaacttcca gactccagat
     3001 tcaggcctca ggagccccct cagggagccg gggtttcact ttgaaagcat gcttagccac
     3061 ccgccaattc ccatcgcaga catggcggag cacacggagc ggctcaaggc caacgacagc
     3121 ctcaagctct cccaggagta tgagtccatc gaccctggac agcagttcac atgggaacat
     3181 tccaacctgg aagtgaacaa gccgaagaac cgctatgcca acgtcatcgc ctatgaccac
     3241 tcccgtgtca tcctccagcc cattgaaggc atcatgggca gtgattacat caatgccaac
     3301 tacgtggacg gctaccggtg tcagaacgcg tacattgcca cgcaggggcc gctgcctgag
     3361 acctttgggg acttctggcg tatggtgtgg gagcagcggt cggcgaccat cgtcatgatg
     3421 acgcggctgg aggagaagtc acggatcaag tgtgatcagt attggcccaa cagaggcacg
     3481 gagacctacg gcttcatcca ggtcacgttg ctagatacca tcgagctggc cacattctgc
     3541 gtcaggacat tctctctgca caagaatggc tccagtgaga aacgcgaggt ccgccagttc
     3601 cagtttacgg cgtggccgga ccatggcgtg cccgaatacc caacgccctt cctggctttc
     3661 ctgcggagag tcaagacctg caacccgcca gatgccggcc ccatcgtggt tcactgcagt
     3721 gccggtgtgg gccgcacagg ctgctttatc gtcatcgacg ccatgcttga gcggatcaag
     3781 ccagagaaga cagtcgatgt ctatggccac gtgacgctca tgaggtccca gcgcaactac
     3841 atggtgcaga cggaggacca gtacagcttc atccacgagg ccctgctgga ggccgtgggc
     3901 tgtggcaaca cagaagtgcc cgcacgcagc ctctatgcct acatccagaa gctggcccag
     3961 gtggagcctg gcgaacacgt cactggcatg gaactcgagt tcaagcggct ggctaactcc
     4021 aaggcccaca cgtcacgctt catcagtgcc aatctgcctt gtaacaagtt caagaaccgc
     4081 ctggtgaaca tcatgcccta tgagagcaca cgggtctgtc tgcaacccat ccggggtgtg
     4141 gagggctctg actacatcaa cgccagcttc attgatggct acaggcagca gaaggcctac
     4201 atcgcgacac aggggccgct ggcggagacc acggaagact tctggcgcat gctgtgggag
     4261 aacaattcga cgatcgtggt gatgctgacc aagctgcggg agatgggccg ggagaagtgt
     4321 caccagtact ggccggccga gcgctctgcc cgctaccagt actttgtggt agatccgatg
     4381 gcagaataca acatgcctca gtatatcctg cgagagttca aggtcacaga tgcccgggat
     4441 ggccagtccc ggactgtccg gcagttccag ttcacagact ggccggaaca gggtgtgcca
     4501 aagtcggggg agggcttcat cgacttcatt ggccaagtgc ataagactaa ggagcagttt
     4561 ggccaggacg gccccatctc tgtccactgc agtgccggcg tgggcaggac gggcgtcttc
     4621 atcacgctta gcatcgtgct ggagcggatg cggtatgaag gcgtggtgga catctttcag
     4681 acggtgaaga tgctacgaac ccagcggccg gccatggtgc agacagagga tgagtaccag
     4741 ttctgttacc aggcggcact ggagtacctc ggaagctttg accactatgc aacctaaagc
     4801 catggttccc cccaggcccg acaccactgg ccccggatgc ctctgcccct cccgggcgga
     4861 cctcctgagg cctggacccc cagtgggcag ggcaggaggt ggcagcggca gcagctgtgt
     4921 ttctgcacca tttccgagga cgacgcagcc cctcgagccc ccccaccggc cccggccgcc
     4981 ccagcgacct ccctggcacc ggccgccgcc ttcaaatact tggcacattc ctcctttcct
     5041 tccaattcca aaaccagatt ccggggtggg gggtgggggg atggtgagca aataggagtg
     5101 ctccccagaa ccagaggagg gtggggcaca gaccatagac ggacccctcg tcctccccca
     5161 gcggtggtag ggggacccgg ggggctcctc cccgctctgc agcctgggga cactgggctg
     5221 ggaccagaat ccagctttct tttaaaactc tcagtgtaac tgtatcccgt gacatttcat
     5281 tttttttaaa tagtgtattt ttttttccat tttttttttt aagagaaaca aacaaaagac
     5341 tcgccagtca atgactttca aagagaacta actttggctt attcatattc tgttcaaaga
     5401 cagtctattt tttcactgta gaaagcgtcc ttgtgtgata gttacgttcg caaacgcgca
     5461 cgccaggccc atggctgtac cttggctttt tttttttttt tttttttttt aatttttcct
     5521 accatcagaa agtgtgcttt gctcacagaa gaatgggatg tccttttttc tttcttggct
     5581 ttttttttcc ccctttttgt ttcattttta taaattaaat tttcagacat atcaaataca
     5641 gttctgaggg taaggtcatg ggggagctcg gacccagtgg cgttgggtgc ggttgagggg
     5701 gacgctgctg taagaggaga gagatgacag tggtcctcct ctgagagcct gagctgtctc
     5761 cccgtctccc gcccccaagg agacagagag gatcctactt cttcggggac agtggctgta
     5821 tggctgtgct gccccacatc agggaccctt tccccctggg actgtggggc agtttgggag
     5881 caaaaccaga aggacaggcc cccctctacc cgcctaccct gagcaagcga gttgttcctc
     5941 tttgtacaag ggcaggtctg cggttacttt caacactgtt tattccagcg gaagcagccg
     6001 ggtggttttc ccacccccgt gtatgtagat atatcgactt tgtattaaag gaagatcgtc
     6061 tga
//
