LOCUS       XM_017027074            6031 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens protein tyrosine phosphatase receptor type
            S (PTPRS), transcript variant X19, mRNA.
ACCESSION   XM_017027074
VERSION     XM_017027074.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000019.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017027074.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6031
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
     gene            1..6031
                     /gene="PTPRS"
                     /gene_synonym="PTPSIGMA; R-PTP-S; R-PTP-sigma"
                     /note="protein tyrosine phosphatase receptor type S;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 58 ESTs, 636 long SRA reads, 11
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:5802"
                     /db_xref="HGNC:HGNC:9681"
                     /db_xref="MIM:601576"
     CDS             200..4765
                     /gene="PTPRS"
                     /gene_synonym="PTPSIGMA; R-PTP-S; R-PTP-sigma"
                     /codon_start=1
                     /product="receptor-type tyrosine-protein phosphatase S
                     isoform X14"
                     /protein_id="XP_016882563.1"
                     /db_xref="GeneID:5802"
                     /db_xref="HGNC:HGNC:9681"
                     /db_xref="MIM:601576"
                     /translation="MAPTWGPGMVSVVGPMGLLVVLLVGGCAAEEPPRFIKEPKDQIG
                     VSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDE
                     NVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASG
                     NPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYS
                     SPANLYVRELREVRRVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDL
                     TPEDDMPVGRNVLELTDVKDSANYTCVAMSSLGVIEAVAQITVKSLPKAPGTPMVTEN
                     TATSITITWDSGNPDPVSYYVIEYKSKSQDGPYQIKEDITTTRYSIGGLSPNSEYEIW
                     VSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIVQWEEPVEPNGLIRG
                     YRVYYTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQ
                     VKTQQGVPGQPMNLRAEARSETSITLSWSPPRQESIIKYELLFREGDHGREVGRTFDP
                     TTSYVVEDLKPNTEYAFRLAARSPQGLGAFTPVVRQRTLQSISPKNFKVKMIMKTSVL
                     LSWEFPDNYNSPTPYKIQYNGLTLDVDGRTTKKLITHLKPHTFYNFVLTNRGSSLGGL
                     QQTVTAWTAFNLLNGKPSVAPKPDADGFIMVYLPDGQSPVPVQSYFIVMVPLRKSRGG
                     QFLTPLGSPEDMDLEELIQDISRLQRRSLRHSRQLEVPRPYIAARFSVLPPTFHPGDQ
                     KQYGGFDNRGLEPGHRYVLFVLAVLQKSEPTFAASPFSDPFQLDNPDPQPIVDGEEGL
                     IWVIGPVLAVVFIICIVIAILLYKNKPDSKRKDSEPRTKCLLNNADLAPHHPKDPVEM
                     RRINFQTPDSGLRSPLREPGFHFESMLSHPPIPIADMAEHTERLKANDSLKLSQEYES
                     IDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILQPIEGIMGSDYINANYVDGYRC
                     QNAYIATQGPLPETFGDFWRMVWEQRSATIVMMTRLEEKSRIKCDQYWPNRGTETYGF
                     IQVTLLDTIELATFCVRTFSLHKNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFLRR
                     VKTCNPPDAGPIVVHCSAGVGRTGCFIVIDAMLERIKPEKTVDVYGHVTLMRSQRNYM
                     VQTEDQYSFIHEALLEAVGCGNTEVPARSLYAYIQKLAQVEPGEHVTGMELEFKRLAN
                     SKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQ
                     KAYIATQGPLAETTEDFWRMLWENNSTIVVMLTKLREMGREKCHQYWPAERSARYQYF
                     VVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQV
                     HKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPA
                     MVQTEDEYQFCYQAALEYLGSFDHYAT"
ORIGIN      
        1 cttcgctgcg cgccgcgctc cgggcggacc gagggacgcg gggagcggct gcggcgggcc
       61 ctgtggaggc ctcgcggggc ctgggcccga tctccgagcc gcgggacgtt gccccatctg
      121 acgctcggct cgaggcctct ctgtgaggga ccggggggcc atccccctcc agggcggaga
      181 tcggaggtcg ctgccaagca tggcgcccac ctggggccct ggcatggtgt ctgtggttgg
      241 tcccatgggc ctccttgtgg tcctgctcgt tggaggctgt gcagcagaag agccccccag
      301 gtttatcaaa gaacccaagg accagatcgg cgtgtcgggg ggtgtggcct ctttcgtgtg
      361 tcaggccacg ggtgacccca agccacgagt gacctggaac aagaagggca agaaggtcaa
      421 ctctcagcgc tttgagacga ttgagtttga tgagagtgca ggggcagtgc tgaggatcca
      481 gccgctgagg acaccgcggg atgaaaacgt gtacgagtgt gtggcccaga actcggttgg
      541 ggagatcaca gtccatgcca agcttactgt cctccgagag gaccagctgc cctctggctt
      601 ccccaacatc gacatgggcc cacagttgaa ggtggtggag cggacacgga cagccaccat
      661 gctctgtgca gccagcggca accctgaccc tgagatcacc tggttcaagg acttcctgcc
      721 tgtggatcct agtgccagca atggacgcat caaacagctg cgatcaggag ccctgcagat
      781 tgaaagcagt gaggaaaccg accagggcaa atatgagtgt gtggccacca acagcgccgg
      841 cgtgcgctac tcctcacctg ccaacctcta cgtgcgagag cttcgagaag tccgccgcgt
      901 ggccccgcgc ttctccatcc tgcccatgag ccacgagatc atgccagggg gcaacgtgaa
      961 catcacctgc gtggccgtgg gctcgcccat gccatacgtg aagtggatgc agggggccga
     1021 ggacctgacc cccgaggatg acatgcccgt gggtcggaac gtgctggaac tcacagatgt
     1081 caaggactcg gccaactaca cctgcgtggc catgtccagc ctgggcgtca ttgaggcggt
     1141 tgctcagatc acggtgaaat ctctccccaa agctcccggg actcccatgg tgactgagaa
     1201 cacagccacc agcatcacca tcacgtggga ctcgggcaac ccagatcctg tgtcctatta
     1261 cgtcatcgaa tataaatcca agagccaaga cgggccgtat cagattaaag aggacatcac
     1321 caccacacgt tacagcatcg gcggcctgag ccccaactcg gagtacgaga tctgggtgtc
     1381 ggccgtcaac tccatcggcc aggggccccc cagcgagtcc gtggtcaccc gcacaggcga
     1441 gcaggccccg gccagcgcgc cgcggaacgt gcaagcccgg atgctcagcg cgaccaccat
     1501 gattgtgcag tgggaggagc cggtggagcc caacggcctg atccgcggct accgcgtcta
     1561 ctacaccatg gaaccggagc accccgtggg caactggcag aagcacaacg tggacgacag
     1621 cctgctgacc accgtgggca gcctgctgga ggacgagacc tacaccgtgc gggtgctcgc
     1681 cttcacctcc gtcggcgacg ggcccctctc ggaccccatc caggtcaaga cgcagcaggg
     1741 agtgccgggc cagcccatga acctgcgggc cgaggccagg tcggagacca gcatcacgct
     1801 gtcctggagc cccccgcggc aggagagtat catcaagtac gagctcctct tccgggaagg
     1861 cgaccatggc cgggaggtgg gaaggacctt cgacccgacg acttcctacg tggtggagga
     1921 cctgaagccc aacacggagt acgccttccg cctggcggcc cgctcgccgc agggcctggg
     1981 cgccttcacc cccgtggtgc ggcagcgcac gctgcagtcc atctcgccca agaacttcaa
     2041 ggtgaaaatg atcatgaaga catcagttct gctcagctgg gagttccctg acaactacaa
     2101 ctcacccaca ccctacaaga tccagtacaa tgggctcaca ctggatgtgg atggccgtac
     2161 caccaagaag ctcatcacgc acctcaagcc ccacaccttc tacaactttg tgctgaccaa
     2221 tcgcggcagc agcctgggcg gcctccagca gacggtcacc gcctggactg ccttcaacct
     2281 gctcaacggc aagcccagcg tcgcccccaa gcctgatgct gacggcttca tcatggtgta
     2341 tcttcctgac ggccagagcc ccgtgcctgt ccagagctat ttcattgtga tggtgccact
     2401 gcgcaagtct cgtggaggcc aattcctgac cccgctgggt agcccagagg acatggatct
     2461 ggaagagctc atccaggaca tctcacggct acagaggcgc agcctgcggc actcgcgtca
     2521 gctggaggtg ccccggccct atattgcagc tcgcttctct gtgctgccac ccacgttcca
     2581 tcccggcgac cagaagcagt atggcggctt cgataaccgg ggcctggagc ccggccaccg
     2641 ctatgtcctc ttcgtgcttg ccgtgcttca gaagagcgag cctacctttg cagccagtcc
     2701 cttctcagac cccttccagc tggataaccc ggacccccag cccatcgtgg atggcgagga
     2761 ggggcttatc tgggtgatcg ggcctgtgct ggccgtggtc ttcataatct gcattgtcat
     2821 tgctatcctg ctctacaaga acaaacccga cagtaaacgc aaggactcag aaccccgcac
     2881 caaatgcctc ctgaacaatg ccgacctcgc ccctcaccac cccaaggacc ctgtggaaat
     2941 gagacgcatt aacttccaga ctccagattc aggcctcagg agccccctca gggagccggg
     3001 gtttcacttt gaaagcatgc ttagccaccc gccaattccc atcgcagaca tggcggagca
     3061 cacggagcgg ctcaaggcca acgacagcct caagctctcc caggagtatg agtccatcga
     3121 ccctggacag cagttcacat gggaacattc caacctggaa gtgaacaagc cgaagaaccg
     3181 ctatgccaac gtcatcgcct atgaccactc ccgtgtcatc ctccagccca ttgaaggcat
     3241 catgggcagt gattacatca atgccaacta cgtggacggc taccggtgtc agaacgcgta
     3301 cattgccacg caggggccgc tgcctgagac ctttggggac ttctggcgta tggtgtggga
     3361 gcagcggtcg gcgaccatcg tcatgatgac gcggctggag gagaagtcac ggatcaagtg
     3421 tgatcagtat tggcccaaca gaggcacgga gacctacggc ttcatccagg tcacgttgct
     3481 agataccatc gagctggcca cattctgcgt caggacattc tctctgcaca agaatggctc
     3541 cagtgagaaa cgcgaggtcc gccagttcca gtttacggcg tggccggacc atggcgtgcc
     3601 cgaataccca acgcccttcc tggctttcct gcggagagtc aagacctgca acccgccaga
     3661 tgccggcccc atcgtggttc actgcagtgc cggtgtgggc cgcacaggct gctttatcgt
     3721 catcgacgcc atgcttgagc ggatcaagcc agagaagaca gtcgatgtct atggccacgt
     3781 gacgctcatg aggtcccagc gcaactacat ggtgcagacg gaggaccagt acagcttcat
     3841 ccacgaggcc ctgctggagg ccgtgggctg tggcaacaca gaagtgcccg cacgcagcct
     3901 ctatgcctac atccagaagc tggcccaggt ggagcctggc gaacacgtca ctggcatgga
     3961 actcgagttc aagcggctgg ctaactccaa ggcccacacg tcacgcttca tcagtgccaa
     4021 tctgccttgt aacaagttca agaaccgcct ggtgaacatc atgccctatg agagcacacg
     4081 ggtctgtctg caacccatcc ggggtgtgga gggctctgac tacatcaacg ccagcttcat
     4141 tgatggctac aggcagcaga aggcctacat cgcgacacag gggccgctgg cggagaccac
     4201 ggaagacttc tggcgcatgc tgtgggagaa caattcgacg atcgtggtga tgctgaccaa
     4261 gctgcgggag atgggccggg agaagtgtca ccagtactgg ccggccgagc gctctgcccg
     4321 ctaccagtac tttgtggtag atccgatggc agaatacaac atgcctcagt atatcctgcg
     4381 agagttcaag gtcacagatg cccgggatgg ccagtcccgg actgtccggc agttccagtt
     4441 cacagactgg ccggaacagg gtgtgccaaa gtcgggggag ggcttcatcg acttcattgg
     4501 ccaagtgcat aagactaagg agcagtttgg ccaggacggc cccatctctg tccactgcag
     4561 tgccggcgtg ggcaggacgg gcgtcttcat cacgcttagc atcgtgctgg agcggatgcg
     4621 gtatgaaggc gtggtggaca tctttcagac ggtgaagatg ctacgaaccc agcggccggc
     4681 catggtgcag acagaggatg agtaccagtt ctgttaccag gcggcactgg agtacctcgg
     4741 aagctttgac cactatgcaa cctaaagcca tggttccccc caggcccgac accactggcc
     4801 ccggatgcct ctgcccctcc cgggcggacc tcctgaggcc tggaccccca gtgggcaggg
     4861 caggaggtgg cagcggcagc agctgtgttt ctgcaccatt tccgaggacg acgcagcccc
     4921 tcgagccccc ccaccggccc cggccgcccc agcgacctcc ctggcaccgg ccgccgcctt
     4981 caaatacttg gcacattcct cctttccttc caattccaaa accagattcc ggggtggggg
     5041 gtggggggat ggtgagcaaa taggagtgct ccccagaacc agaggagggt ggggcacaga
     5101 ccatagacgg acccctcgtc ctcccccagc ggtggtaggg ggacccgggg ggctcctccc
     5161 cgctctgcag cctggggaca ctgggctggg accagaatcc agctttcttt taaaactctc
     5221 agtgtaactg tatcccgtga catttcattt tttttaaata gtgtattttt ttttccattt
     5281 ttttttttaa gagaaacaaa caaaagactc gccagtcaat gactttcaaa gagaactaac
     5341 tttggcttat tcatattctg ttcaaagaca gtctattttt tcactgtaga aagcgtcctt
     5401 gtgtgatagt tacgttcgca aacgcgcacg ccaggcccat ggctgtacct tggctttttt
     5461 tttttttttt ttttttttaa tttttcctac catcagaaag tgtgctttgc tcacagaaga
     5521 atgggatgtc cttttttctt tcttggcttt ttttttcccc ctttttgttt catttttata
     5581 aattaaattt tcagacatat caaatacagt tctgagggta aggtcatggg ggagctcgga
     5641 cccagtggcg ttgggtgcgg ttgaggggga cgctgctgta agaggagaga gatgacagtg
     5701 gtcctcctct gagagcctga gctgtctccc cgtctcccgc ccccaaggag acagagagga
     5761 tcctacttct tcggggacag tggctgtatg gctgtgctgc cccacatcag ggaccctttc
     5821 cccctgggac tgtggggcag tttgggagca aaaccagaag gacaggcccc cctctacccg
     5881 cctaccctga gcaagcgagt tgttcctctt tgtacaaggg caggtctgcg gttactttca
     5941 acactgttta ttccagcgga agcagccggg tggttttccc acccccgtgt atgtagatat
     6001 atcgactttg tattaaagga agatcgtctg a
//
