LOCUS       XM_047423639            5714 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens protein tyrosine phosphatase non-receptor
            type 3 (PTPN3), transcript variant X11, mRNA.
ACCESSION   XM_047423639
VERSION     XM_047423639.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000009.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5714
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
     gene            1..5714
                     /gene="PTPN3"
                     /gene_synonym="PTP-H1; PTPH1"
                     /note="protein tyrosine phosphatase non-receptor type 3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 mRNAs, 18 ESTs, 575 long SRA reads, 2
                     Proteins, and 95% coverage of the annotated genomic
                     feature by RNAseq alignments, including 26 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:5774"
                     /db_xref="HGNC:HGNC:9655"
                     /db_xref="MIM:176877"
     CDS             323..1858
                     /gene="PTPN3"
                     /gene_synonym="PTP-H1; PTPH1"
                     /codon_start=1
                     /product="tyrosine-protein phosphatase non-receptor type 3
                     isoform X8"
                     /protein_id="XP_047279595.1"
                     /db_xref="GeneID:5774"
                     /db_xref="HGNC:HGNC:9655"
                     /db_xref="MIM:176877"
                     /translation="MTYITETEDVFYTYKGSLAPQDSDSEVSQNRSPHQESLSENNPA
                     QSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDDFHRVTKGGSTEDASQYYCDKNDNG
                     DSYLVLIRITPDEDGKFGFNLKGGVDQKMPLVVSRINPESPADTCIPKLNEGDQIVLI
                     NGRDISEHTHDQVVMFIKASRESHSRELALVIRRRAVRSFADFKSEDELNQLFPEAIF
                     PMCPEGGDTLEGSMAQLKKGLESGTVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKD
                     VLPYDTTRVLLQGNEDYINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQK
                     LSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQ
                     TGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVL
                     VTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSSQYKFVCEAILRVYEEGLVQML
                     DPS"
ORIGIN      
        1 aagagccttt ttacttctgc tttggacaca gcattattga ttatccaggc ccagggggat
       61 tgcaaatcat ggaggccctg acagtcctga ggagaaatgg ctaacaaaga aagggaagat
      121 ggaaaaactg tgagggaaaa tagaacttag aaagcttggc agcttgggat cccccgctgc
      181 aggagctgac gcccaggtgc cacactggat gccctgagaa cacggcctca ttggattcat
      241 tctcaggagc aggcgaagtc ctcggctccg gcacgaaatc cgaaagccac gccactcttc
      301 tgcagataac cttgcaaatg aaatgaccta catcacggaa acggaagatg tattttacac
      361 gtacaagggc tctctggccc ctcaagacag cgattctgaa gtttctcaga accgaagccc
      421 gcaccaagag agtttatccg agaacaatcc ggcacaaagc tacctgaccc agaagtcatc
      481 cagttctgtg tctccatctt caaatgctcc aggctcctgc tcacctgacg gcgttgatca
      541 gcagctctta gatgacttcc acagggtgac caaagggggc tccaccgagg acgccagcca
      601 gtactactgt gacaagaatg ataatggtga cagctactta gtcttgatcc gtatcacacc
      661 agatgaagat ggaaaatttg gatttaatct taagggagga gtggatcaaa agatgcctct
      721 tgtggtatca aggataaacc cagagtcacc tgcggacacc tgcattccta agctgaacga
      781 aggggatcaa atcgtgttaa tcaatggccg ggacatctca gaacacacgc atgaccaagt
      841 ggtgatgttc atcaaagcca gccgggagtc ccactcacgg gagctggccc tggtgatcag
      901 gaggagagct gtccgctcat ttgctgactt caagtctgaa gatgaactga accagctttt
      961 ccccgaagcc attttcccca tgtgtccgga gggtggggac actttggagg gatccatggc
     1021 acagctaaag aagggcctcg aaagcgggac ggtgctgatc cagtttgagc aactctacag
     1081 aaaaaagcca ggtttggcca tcacgtttgc aaagctgcct caaaatttgg acaaaaaccg
     1141 atataaagat gtgctgcctt atgacaccac ccgggtatta ttgcagggaa atgaagatta
     1201 tattaatgca agttacgtga acatggaaat tcctgctgct aaccttgtga acaagtacat
     1261 cgccactcag gggcccctgc cgcatacctg tgcacagttt tggcaggttg tctgggatca
     1321 gaagttgtca ctcattgtca tgttgacgac tctcacagaa cgagggcgga ccaaatgtca
     1381 ccagtactgg ccagatcccc ccgacgtcat gaaccacggc ggctttcaca tccagtgtca
     1441 gtcagaggac tgcaccatcg cctatgtgtc ccgagaaatg ctggtcacaa acacccagac
     1501 cggggaagaa cacacagtga cacatctcca gtacgtcgca tggcctgacc acggtgtgcc
     1561 cgatgactcc tccgactttc tggaatttgt aaactatgtg aggtctctga gagtggacag
     1621 cgagcccgtc ctagttcact gcagtgctgg aataggtcga accggtgtgt tggtcactat
     1681 ggaaacagcc atgtgcctaa ctgagaggaa cctgcccatt tacccactgg atattgtccg
     1741 aaaaatgcga gaccagcgcg ccatgatggt gcagacatca agccagtaca agtttgtgtg
     1801 tgaagcgatt cttcgtgtgt atgaagaagg tttagtccaa atgctggatc ctagttaaga
     1861 caactgtgaa aaagttcatt cctctttccc aagggcatcc tccttgaaag aggaggacag
     1921 acctctctgg aagcagcaag aggaaccagt agctgtggga aaggaatggg cacctctgaa
     1981 cccaggcact ttaaacttct atagaaaaga tatcgtgtac ataggaactg gtgtagataa
     2041 gcatgcaatt atggcatcat ttaggcctgt atttctatgg aaagatacaa aaaggatctc
     2101 agtttggggc ctgtcctaat gccttcttcc ctaacatcac cacacacacc cctgtcggca
     2161 tcctggagca attgagaccg gacacccaca gagctgttgt cctcccagca acaagatggt
     2221 gtggttatct tgggtcattt ggatgttttg tttgtttctg tgtgtcagac tgtaagggct
     2281 gagctttctg tgcttctagg tggagctgga acaattcaga ttcacccgcc ctgatgctaa
     2341 ggaaaccctg acgtatgtac tagatggcag ggcactgggg gtcaggctga aggctgagca
     2401 acacctctct gccctccctc cctttgtccc atctcccagc gacttccaat attcatgttt
     2461 ctgagaattg tgtccctctt caggttccct cttggtgcct aacctggatt agtaatgtgc
     2521 attcaggtga attttcagct gaggctctga gaactggtac tctcagtgtg ttctggtcat
     2581 cttgtggctt agttgtagaa gcaggtgtgt ctcttgcctc tgcttgcctc ctactgcaca
     2641 ctcagcaccc aggactggaa tcaccgacta ctgaatctcc tacatgtatt gctgctactt
     2701 caagctcctc cacttgaaac cttatgattt tcccaagggg agatgggaca gtgtcatcta
     2761 aatattccga atgtttggcc ttctgagaaa agagcttcta gtaattgaac catgggaaac
     2821 ccagcttctg gagggttggc cgtggggctg tgtacatgtg tgtgcccagg ggtgagtgtt
     2881 tctcaggatt cctaacgatt caaattaccg ttgagtatat ataaagaatg agtctctgta
     2941 tggaagaaca aatgtgtgca ttcaccccca gtcacaatgg tctccattgc atttcaaagg
     3001 agaggatcag actatctgaa tataaacaca atctgatgtt aatttattct aagaacacca
     3061 tcattttgat tgtcctaaag aattctgcct ttgtgaatac cgtgttaaat ttttttaaat
     3121 ttgtgacagg attgtagcaa attattattt aaggaaaata aattgtgtaa acatttaatg
     3181 tggtattttt gaacagcggt ttttatgtac tcagaagagg aagtaaagcc aggttcttaa
     3241 tggtatttat agaaaagatg ttttcatatt ataatgcaca taaatgaagc cattttgata
     3301 ttcagcaaat tcggtgccaa ttgaatagtt tgctggtagc aagacggatg aagacctata
     3361 tgggagattc tttatctcta gagctagcat atttacttgc atactttgtt tcttttccac
     3421 atggatattt tactgctaaa tggcagaggt gggagggaga tgtcacacag taccataacc
     3481 ccatattgaa aacaagaaac caccagaaag tttgcagcta aggggcaggg gattcagttc
     3541 ctacgcccac tcagcactaa ctacttgcgg gcctggttgc ttagaagctc tacctctctt
     3601 tcattatctg taaaatagaa acaatactta ggactttagt tggaacatga ggattgaata
     3661 agatcacgct attcatgtga ctttttatcg gctagaacag caacagacac tgctgtgggt
     3721 gagttactta gaaaagttta gttatcagtg attagcccaa aaacacatca gtcaaaaata
     3781 gaatccactg gatttttgtc tctcttttta gagacagggt ctcactgtcg cccaggctgg
     3841 agtacagtgg catgatcatt gttcactgca gcctcaaatt cctgggctca agcaatcctc
     3901 gcacctcagc ctcctgagta gccgggacta taggcacatg ccacctcacc tggcttgtgt
     3961 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtag
     4021 agacaggatc ttgatgtgtt gcctaggctg gtctcaaact cctggcctca agtgatcttc
     4081 ccacctcagc ctccaaaact gttgggatta taggcgtgag ccactgtgcc cagcctaact
     4141 gggtttttat gagaggaaaa tagaaaatgc tcttctagaa gagagagaac aagagcacaa
     4201 aataatctgg actcacaaaa attcagcaag ctccaagaaa gggggatgga gggaacgctg
     4261 gcaaaaattt aaatgccatt aggatattta gcaagttatt actgtttggt aaaaatgcat
     4321 catcaccctg tgtgcaaaat gcttgcaaag tagtctaaat gtctttggag atgggtgttt
     4381 tactgctttt ttccaaaaac aaattgttta ttatggttgc agaaatgcag ccattacggt
     4441 cacataaatt tctaaaaagc ctaccaaagg ttgcaagcag tcttctgcca ctgggcaggc
     4501 cagcagttca gacccagcga ggttgccagg aacaaatcca ggaaatactg ggaagaacaa
     4561 gacaagagaa ttacctaaaa gagcaaacaa ttcaagtaaa tcctgtagct attaccactt
     4621 aaaatccgta gctcaagatt cctgtttcac caccttatac acttaagcaa ttatacttaa
     4681 gccttttttt agtcctaagt gaagaactac atcagaatca ggataagtat tttgcctggg
     4741 aaatttggct gcatatgaat ggagaagaca tttacatcct atgttctggc actttctgaa
     4801 agatctaatt aaacatgttg atgtgccaat ttaatcaaga tgagagatcc ctgctggtgt
     4861 caccctctag aacctgcact tggtgttttg actttccaga agaaaaaaat gcaactttgg
     4921 ttagggggca gtggttggat cacacagttg tctttcgttt cctaccacag taattcatat
     4981 ttaaatatgc ttttagatta gtgtggatac tattgctgct gtgttgctac ctgacctttt
     5041 tctggggggg gtacctcaga aatgagcatt tgagggcaag cgaaaaagcc ctcttcatcc
     5101 tccagaggca acaaagaggc agcagaaatg gggaaagatt gtgagaggca gggcttgggt
     5161 ctagacctgg acttaggcaa gatatgttgc cctcaaccct gagttttctt atatgtaaaa
     5221 agggaaggtt gggctggact agatgaggtc aagatttgcc attctgggag gctgatattc
     5281 cagagaatca aaattaatcc taaaccaaag ctttatggct gctacagaga catgtcacat
     5341 ttctgagact tgtcaccaag agtttgtccc tcagactttg gcgctgttga atgcaaagac
     5401 aaggatggcc accttctggt tcttgcctgt tgtcctcagc tgagagcagt ctcggtaaag
     5461 gtggcaaaga ttctgtgacc tcagaccggg gaccaaatgc ttgggagtct gatggccggg
     5521 ctgggccacc attctcatag ctctcattct gtttggagca accaaaggat ttgtgtgaag
     5581 ttatttggaa aaggacctta actgagcagt aatctttttt ctgtatattt ggaatgtttt
     5641 tcattctgac ctgttctgtc agtgattcta ctgaaaaaca atttaatcaa tataaaaatg
     5701 ttcaagctat gcaa
//
