LOCUS       XM_047423637            6684 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens protein tyrosine phosphatase non-receptor
            type 3 (PTPN3), transcript variant X7, mRNA.
ACCESSION   XM_047423637
VERSION     XM_047423637.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000009.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6684
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
     gene            1..6684
                     /gene="PTPN3"
                     /gene_synonym="PTP-H1; PTPH1"
                     /note="protein tyrosine phosphatase non-receptor type 3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 mRNAs, 28 ESTs, 819 long SRA reads, 9
                     Proteins, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments, including 25 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:5774"
                     /db_xref="HGNC:HGNC:9655"
                     /db_xref="MIM:176877"
     CDS             189..2828
                     /gene="PTPN3"
                     /gene_synonym="PTP-H1; PTPH1"
                     /codon_start=1
                     /product="tyrosine-protein phosphatase non-receptor type 3
                     isoform X5"
                     /protein_id="XP_047279593.1"
                     /db_xref="GeneID:5774"
                     /db_xref="HGNC:HGNC:9655"
                     /db_xref="MIM:176877"
                     /translation="MMLRGGYSAIVMTSRLRALGGRINNIRTSELPKEKTRSEVICSI
                     HFLDGVVQTFKVTKQDTGQVLLDMVHNHLGVTEKEYFGLQHDDDSVDSPRWLEASKAI
                     RKQLKGGFPCTLHFRVRFFIPDPNTLQQEQTRHLYFLQLKMDICEGRLTCPLNSAVVL
                     ASYAVQSHFGDYNSSIHHPGYLSDSHFIPDQNEDFLTKVESLHEQHSGLKQSEAESCY
                     INIARTLDFYGVELHSGRDLHNLDLMIGIASAGVAVYRKYICTSFYPWVNILKISFKR
                     KKFFIHQRQKQAESREHIVAFNMLNYRSCKNLWKSCVEHHTFFQAKKLLPQEKNVLSQ
                     YWTMGSRNTKKRSPRLRHEIRKPRHSSADNLANEMTYITETEDVFYTYKGSLAPQDSD
                     SEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDDFHRV
                     TKGGSTEDASQYYCDKNDNGDSYLVLIRITPDEDGKFGFNLKGGVDQKMPLVVSRINP
                     ESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASRESHSRELALVIRRRAVR
                     SFADFKSEDELNQLFPEAIFPMCPEGGDTLEGSMAQLKKGLESGTVLIQFEQLYRKKP
                     GLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNEDYINASYVNMEIPAANLVNKYIA
                     TQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQC
                     QSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLR
                     VDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSSQ
                     YKFVCEAILRVYEEGLVQMLDPS"
ORIGIN      
        1 gggcacactg gcaaccagca gggttaccga acctaatata acctgagatg gccccctgga
       61 ttaaaacctt acaggcagag gattttaaag ctggaaaaag ctttagaggg ctctaacctg
      121 ggaaaccgag ccagagaaaa gtgagttagt gacttcgcga gtcacctggc tgatcagaga
      181 caaataagat gatgcttcgt gggggttatt cagcgatagt tatgacctcc cggttacgtg
      241 cgttgggtgg aagaattaat aatatacgca cctcggagtt acccaaagag aaaactcgat
      301 cagaagtcat ttgcagcatc cactttttag atggcgtggt acagaccttt aaagttacta
      361 aacaagacac tggccaggtt cttctggata tggtgcacaa ccacctgggt gtgactgaaa
      421 aggaatattt tggtttacag catgatgacg actccgtgga ctctcctaga tggctggaag
      481 caagcaaagc catcaggaag cagttaaaag gaggtttccc ctgtaccctg cattttcgag
      541 taagattttt tatacctgat cccaacacac tgcagcaaga acaaaccagg cacttgtatt
      601 tcttacaact gaagatggat atttgcgaag gaaggttaac ctgccctctt aactcagcag
      661 tggttctagc gtcctatgcc gtacaatctc attttggaga ctataattct tccatacatc
      721 atccaggcta tctttccgat agtcacttta tacccgatca aaatgaggac tttttaacaa
      781 aagtcgaatc tctgcatgag cagcacagtg ggctaaaaca atcagaagca gaatcctgct
      841 atatcaacat agcgcggacc ctcgacttct atggagtaga actgcacagt ggtagggatc
      901 tgcacaattt agacctaatg attggaattg cttccgcggg tgttgctgtg taccgaaaat
      961 acatttgcac aagtttctat ccttgggtga acattctcaa aatttctttc aaaaggaaaa
     1021 agttcttcat acatcagcga cagaaacagg ctgaatccag ggaacatatt gtggccttca
     1081 acatgctgaa ttaccgatct tgcaaaaact tgtggaaatc ctgtgttgag caccatacgt
     1141 tctttcaggc aaagaagcta ctacctcagg aaaagaatgt tctgtctcag tactggacta
     1201 tgggctctcg gaacaccaaa aagcgaagtc ctcggctccg gcacgaaatc cgaaagccac
     1261 gccactcttc tgcagataac cttgcaaatg aaatgaccta catcacggaa acggaagatg
     1321 tattttacac gtacaagggc tctctggccc ctcaagacag cgattctgaa gtttctcaga
     1381 accgaagccc gcaccaagag agtttatccg agaacaatcc ggcacaaagc tacctgaccc
     1441 agaagtcatc cagttctgtg tctccatctt caaatgctcc aggctcctgc tcacctgacg
     1501 gcgttgatca gcagctctta gatgacttcc acagggtgac caaagggggc tccaccgagg
     1561 acgccagcca gtactactgt gacaagaatg ataatggtga cagctactta gtcttgatcc
     1621 gtatcacacc agatgaagat ggaaaatttg gatttaatct taagggagga gtggatcaaa
     1681 agatgcctct tgtggtatca aggataaacc cagagtcacc tgcggacacc tgcattccta
     1741 agctgaacga aggggatcaa atcgtgttaa tcaatggccg ggacatctca gaacacacgc
     1801 atgaccaagt ggtgatgttc atcaaagcca gccgggagtc ccactcacgg gagctggccc
     1861 tggtgatcag gaggagagct gtccgctcat ttgctgactt caagtctgaa gatgaactga
     1921 accagctttt ccccgaagcc attttcccca tgtgtccgga gggtggggac actttggagg
     1981 gatccatggc acagctaaag aagggcctcg aaagcgggac ggtgctgatc cagtttgagc
     2041 aactctacag aaaaaagcca ggtttggcca tcacgtttgc aaagctgcct caaaatttgg
     2101 acaaaaaccg atataaagat gtgctgcctt atgacaccac ccgggtatta ttgcagggaa
     2161 atgaagatta tattaatgca agttacgtga acatggaaat tcctgctgct aaccttgtga
     2221 acaagtacat cgccactcag gggcccctgc cgcatacctg tgcacagttt tggcaggttg
     2281 tctgggatca gaagttgtca ctcattgtca tgttgacgac tctcacagaa cgagggcgga
     2341 ccaaatgtca ccagtactgg ccagatcccc ccgacgtcat gaaccacggc ggctttcaca
     2401 tccagtgtca gtcagaggac tgcaccatcg cctatgtgtc ccgagaaatg ctggtcacaa
     2461 acacccagac cggggaagaa cacacagtga cacatctcca gtacgtcgca tggcctgacc
     2521 acggtgtgcc cgatgactcc tccgactttc tggaatttgt aaactatgtg aggtctctga
     2581 gagtggacag cgagcccgtc ctagttcact gcagtgctgg aataggtcga accggtgtgt
     2641 tggtcactat ggaaacagcc atgtgcctaa ctgagaggaa cctgcccatt tacccactgg
     2701 atattgtccg aaaaatgcga gaccagcgcg ccatgatggt gcagacatca agccagtaca
     2761 agtttgtgtg tgaagcgatt cttcgtgtgt atgaagaagg tttagtccaa atgctggatc
     2821 ctagttaaga caactgtgaa aaagttcatt cctctttccc aagggcatcc tccttgaaag
     2881 aggaggacag acctctctgg aagcagcaag aggaaccagt agctgtggga aaggaatggg
     2941 cacctctgaa cccaggcact ttaaacttct atagaaaaga tatcgtgtac ataggaactg
     3001 gtgtagataa gcatgcaatt atggcatcat ttaggcctgt atttctatgg aaagatacaa
     3061 aaaggatctc agtttggggc ctgtcctaat gccttcttcc ctaacatcac cacacacacc
     3121 cctgtcggca tcctggagca attgagaccg gacacccaca gagctgttgt cctcccagca
     3181 acaagatggt gtggttatct tgggtcattt ggatgttttg tttgtttctg tgtgtcagac
     3241 tgtaagggct gagctttctg tgcttctagg tggagctgga acaattcaga ttcacccgcc
     3301 ctgatgctaa ggaaaccctg acgtatgtac tagatggcag ggcactgggg gtcaggctga
     3361 aggctgagca acacctctct gccctccctc cctttgtccc atctcccagc gacttccaat
     3421 attcatgttt ctgagaattg tgtccctctt caggttccct cttggtgcct aacctggatt
     3481 agtaatgtgc attcaggtga attttcagct gaggctctga gaactggtac tctcagtgtg
     3541 ttctggtcat cttgtggctt agttgtagaa gcaggtgtgt ctcttgcctc tgcttgcctc
     3601 ctactgcaca ctcagcaccc aggactggaa tcaccgacta ctgaatctcc tacatgtatt
     3661 gctgctactt caagctcctc cacttgaaac cttatgattt tcccaagggg agatgggaca
     3721 gtgtcatcta aatattccga atgtttggcc ttctgagaaa agagcttcta gtaattgaac
     3781 catgggaaac ccagcttctg gagggttggc cgtggggctg tgtacatgtg tgtgcccagg
     3841 ggtgagtgtt tctcaggatt cctaacgatt caaattaccg ttgagtatat ataaagaatg
     3901 agtctctgta tggaagaaca aatgtgtgca ttcaccccca gtcacaatgg tctccattgc
     3961 atttcaaagg agaggatcag actatctgaa tataaacaca atctgatgtt aatttattct
     4021 aagaacacca tcattttgat tgtcctaaag aattctgcct ttgtgaatac cgtgttaaat
     4081 ttttttaaat ttgtgacagg attgtagcaa attattattt aaggaaaata aattgtgtaa
     4141 acatttaatg tggtattttt gaacagcggt ttttatgtac tcagaagagg aagtaaagcc
     4201 aggttcttaa tggtatttat agaaaagatg ttttcatatt ataatgcaca taaatgaagc
     4261 cattttgata ttcagcaaat tcggtgccaa ttgaatagtt tgctggtagc aagacggatg
     4321 aagacctata tgggagattc tttatctcta gagctagcat atttacttgc atactttgtt
     4381 tcttttccac atggatattt tactgctaaa tggcagaggt gggagggaga tgtcacacag
     4441 taccataacc ccatattgaa aacaagaaac caccagaaag tttgcagcta aggggcaggg
     4501 gattcagttc ctacgcccac tcagcactaa ctacttgcgg gcctggttgc ttagaagctc
     4561 tacctctctt tcattatctg taaaatagaa acaatactta ggactttagt tggaacatga
     4621 ggattgaata agatcacgct attcatgtga ctttttatcg gctagaacag caacagacac
     4681 tgctgtgggt gagttactta gaaaagttta gttatcagtg attagcccaa aaacacatca
     4741 gtcaaaaata gaatccactg gatttttgtc tctcttttta gagacagggt ctcactgtcg
     4801 cccaggctgg agtacagtgg catgatcatt gttcactgca gcctcaaatt cctgggctca
     4861 agcaatcctc gcacctcagc ctcctgagta gccgggacta taggcacatg ccacctcacc
     4921 tggcttgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     4981 gtgtgtgtag agacaggatc ttgatgtgtt gcctaggctg gtctcaaact cctggcctca
     5041 agtgatcttc ccacctcagc ctccaaaact gttgggatta taggcgtgag ccactgtgcc
     5101 cagcctaact gggtttttat gagaggaaaa tagaaaatgc tcttctagaa gagagagaac
     5161 aagagcacaa aataatctgg actcacaaaa attcagcaag ctccaagaaa gggggatgga
     5221 gggaacgctg gcaaaaattt aaatgccatt aggatattta gcaagttatt actgtttggt
     5281 aaaaatgcat catcaccctg tgtgcaaaat gcttgcaaag tagtctaaat gtctttggag
     5341 atgggtgttt tactgctttt ttccaaaaac aaattgttta ttatggttgc agaaatgcag
     5401 ccattacggt cacataaatt tctaaaaagc ctaccaaagg ttgcaagcag tcttctgcca
     5461 ctgggcaggc cagcagttca gacccagcga ggttgccagg aacaaatcca ggaaatactg
     5521 ggaagaacaa gacaagagaa ttacctaaaa gagcaaacaa ttcaagtaaa tcctgtagct
     5581 attaccactt aaaatccgta gctcaagatt cctgtttcac caccttatac acttaagcaa
     5641 ttatacttaa gccttttttt agtcctaagt gaagaactac atcagaatca ggataagtat
     5701 tttgcctggg aaatttggct gcatatgaat ggagaagaca tttacatcct atgttctggc
     5761 actttctgaa agatctaatt aaacatgttg atgtgccaat ttaatcaaga tgagagatcc
     5821 ctgctggtgt caccctctag aacctgcact tggtgttttg actttccaga agaaaaaaat
     5881 gcaactttgg ttagggggca gtggttggat cacacagttg tctttcgttt cctaccacag
     5941 taattcatat ttaaatatgc ttttagatta gtgtggatac tattgctgct gtgttgctac
     6001 ctgacctttt tctggggggg gtacctcaga aatgagcatt tgagggcaag cgaaaaagcc
     6061 ctcttcatcc tccagaggca acaaagaggc agcagaaatg gggaaagatt gtgagaggca
     6121 gggcttgggt ctagacctgg acttaggcaa gatatgttgc cctcaaccct gagttttctt
     6181 atatgtaaaa agggaaggtt gggctggact agatgaggtc aagatttgcc attctgggag
     6241 gctgatattc cagagaatca aaattaatcc taaaccaaag ctttatggct gctacagaga
     6301 catgtcacat ttctgagact tgtcaccaag agtttgtccc tcagactttg gcgctgttga
     6361 atgcaaagac aaggatggcc accttctggt tcttgcctgt tgtcctcagc tgagagcagt
     6421 ctcggtaaag gtggcaaaga ttctgtgacc tcagaccggg gaccaaatgc ttgggagtct
     6481 gatggccggg ctgggccacc attctcatag ctctcattct gtttggagca accaaaggat
     6541 ttgtgtgaag ttatttggaa aaggacctta actgagcagt aatctttttt ctgtatattt
     6601 ggaatgtttt tcattctgac ctgttctgtc agtgattcta ctgaaaaaca atttaatcaa
     6661 tataaaaatg ttcaagctat gcaa
//
