LOCUS       XM_011535142            4264 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens paraspeckle component 1 (PSPC1), transcript
            variant X7, mRNA.
ACCESSION   XM_011535142
VERSION     XM_011535142.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000013.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011535142.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4264
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="13"
     gene            1..4264
                     /gene="PSPC1"
                     /gene_synonym="PSP1"
                     /note="paraspeckle component 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 127
                     ESTs, 201 long SRA reads, 11 Proteins, and 89% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 32 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:55269"
                     /db_xref="HGNC:HGNC:20320"
                     /db_xref="MIM:612408"
     CDS             189..1409
                     /gene="PSPC1"
                     /gene_synonym="PSP1"
                     /codon_start=1
                     /product="paraspeckle component 1 isoform X4"
                     /protein_id="XP_011533444.1"
                     /db_xref="GeneID:55269"
                     /db_xref="HGNC:HGNC:20320"
                     /db_xref="MIM:612408"
                     /translation="MMLRGNLKQVRIEKNPARLRALESAVGESEPAAAAAMALALAGE
                     PAPPAPAPPEDHPDEEMGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLF
                     ERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTV
                     KNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGD
                     GAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYA
                     SRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRL
                     EELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEELRRQQEGFKPNYMENRWGLDM
                     LPRLGSSSPLSSSS"
     polyA_site      4264
                     /gene="PSPC1"
                     /gene_synonym="PSP1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gccattttga atgtgcagct gcagcgggcg tgagttgggg gaggacgggt tgccgactcg
       61 cctacctagc ggtctcttga ttgtcgatat tttgttggca taggtttatg tagagacgta
      121 tacatatata tagacacact gtctataaat ctaggcctgt atccggtgtc cgaggcgaac
      181 tcagtaagat gatgttaaga ggaaacctga agcaagtgcg cattgagaaa aacccggccc
      241 gccttcgcgc cctggagtcc gcggtgggcg agagcgagcc ggcggccgcg gcagccatgg
      301 cgctcgctct tgccggggag ccggcaccgc ccgcgcccgc gcctccagag gaccacccgg
      361 acgaggagat ggggttcact atcgacatca agagtttcct caagccgggc gagaagacgt
      421 acacgcagcg ctgccgcctc ttcgtgggaa atctgcccac cgacatcacg gaggaggact
      481 tcaagaggct cttcgaacgc tatggcgagc ccagcgaagt cttcatcaac cgggaccgtg
      541 gcttcggctt catccgcttg gaatccagaa ccctggctga aattgcaaaa gcagagctgg
      601 acggcaccat tctcaagagc agacctctac ggattcgctt cgctacacat ggagcagcct
      661 tgactgtcaa gaacctttct ccagttgttt ccaatgagct gctagagcaa gcattttctc
      721 agtttggtcc agtagagaaa gctgttgtgg ttgtggatga tcgcggtaga gctacaggaa
      781 aaggttttgt agagtttgca gcaaaacctc ctgcacgaaa ggctctggaa agatgtggtg
      841 atggggcatt cttgctaaca acgacccctc gtccagtcat tgtggaaccc atggagcagt
      901 ttgatgatga agatggcttg ccagagaagc tgatgcagaa aactcaacaa tatcataagg
      961 aaagagaaca accaccacgt tttgctcaac ctgggacatt tgaatttgag tatgcatctc
     1021 gatggaaggc tcttgatgaa atggaaaagc agcagcgtga gcaggttgat agaaacatca
     1081 gagaagccaa agagaaactg gaggcagaaa tggaagcagc taggcatgaa caccaattaa
     1141 tgctaatgag gcaagatcta atgaggcgtc aagaagaact cagacgcttg gaagaactca
     1201 gaaaccaaga gttgcaaaaa cggaagcaaa tacaactaag acatgaagag gagcatcggc
     1261 ggcgtgagga agaaatgatc cgacacagag aacaggagga actgaggcga cagcaagagg
     1321 gctttaagcc aaactacatg gaaaatagat ggggtcttga tatgttgccc aggctgggct
     1381 caagcagtcc tctttcctca tcctcctgag tggctgagac aacaagcaca tgccactgtg
     1441 cccagcagaa cagtgttttt ccaatgtacg taataaacac tcaaggagct tttaaaaaat
     1501 gtgggttctt agatcatact actaataatt gatttgtttt gtgatccagg tagattgtaa
     1561 tacattgatc tttgatcaca tttttttgct aaatccagta gttttcaacc ttgcaatata
     1621 tttgtggaac ttaaggaaaa atgcctgaga ttcagtcctc caagtatttt gattcagtgt
     1681 gtctaggttg gtaccaggag atatacgtgt taaagaaaac tctacacctt gcttatttct
     1741 ttttggtagc gaagattcaa aactactggc cttgtattga aatgagacat actgaaatga
     1801 aaatagttga atttttcatg gatcctggga gtgttagtgg aaggcatgct tgatgtggtt
     1861 caacatggtg taagatttat ataggatgca atttatttat ttattgatgg tatcttgctg
     1921 tgttgcccag gctggagtgc agtggctatt gacaagtgtg attatagcac actacagcct
     1981 caaactcctg ggcttaagtg aatcttcctg cctcagcctc ccaagtagct gggagagtag
     2041 gcatgctgct gtacccatct ttcttcattt ttttctttct tttgattggg tctccctgtg
     2101 ttacccaggc tggtcttgac ctcctgaagc tatcctcctg tctcagtctc ctgaatagtg
     2161 ggactacagt tgcctaccac tgcatatggt tatatatcca tctttagaac acggttcaaa
     2221 cagtatgaca ttctacgtga atagtaccct gcagaatttg ggtgtggcaa ccttgatttg
     2281 ggctttcaga ctatatgtgc aggacatatt atctcaaact atgcattaat tttgcgtgca
     2341 tagttctaat aattttaatt gtctcatcca gtcgaggggt tgacagacta gaacagacca
     2401 ggctcagttc acatgctgcc tatttttgta acactttttt ttgtttgttt tgttttgttt
     2461 tgtttatttt gccctacaaa aactgatttg agtagttgtg acacaactat gtgagactgt
     2521 attgagacta catggcctgc caagcctaaa aaatatttac acctgaccct ttacctgaaa
     2581 tgtttgctga cctctgaatc cgagagttga agggaatcta taaaagtggc tcatattacc
     2641 aaactcgtag agcttgtgaa gaataatgca aatctattca tttatatatt cttttccagt
     2701 gtttttagaa ggctcactga gcacagtacc tcatattcca gatccaagga ttcctgagga
     2761 atccaaatta gtatccagaa ggttcattgg tagtcatggt tataaaccag agcaaaagtt
     2821 aatgggaaga aatggtaaag agtcactgca ttgcagctga cacctgggat tttaaaatct
     2881 ttttttcgtt tttgagatgg agtcttgctc tgtcgcttag gctggagttc agtggcgtga
     2941 tcttggctca ctgcaacctc tgcctcccag gtgcaagtgt ttctcctgcc tcagccttcc
     3001 gagtatctgg gattacaggc acgcgccacc acgattggct aattttttat ttttattttt
     3061 atttttattt ttgagacgga gtcttgctgt ctcgccaggc tggagtgcag tgacatgatt
     3121 tcggcccact ccaacccccg cctcccaggt tcaagtgatt ctcctgcctc agcctcccaa
     3181 atagctggga ctacaggcgt gcgccaccac gcctgggtaa tttttgtatt tttagtagag
     3241 atgtggtttc accatgttgg ccaggatggt ctcgatctct tgacctcagg tgatccgccc
     3301 gctcggcctc ccaaagtggt gggattacat gtatgagcca ccacgcccgg cccacgctcg
     3361 gcaaagtttt tgtatttttg gtagagatgg ggtttcacca tgttggtcag gctggtctcg
     3421 aactcctgac ctcgtgaccc gcccaccttg gcttcccaga gtgttgggat tacaggtgtg
     3481 agccaccgta cccggccaaa atccctttag ttctagtcag tagaggaata aagcactgtt
     3541 ctttcaaatg tgaacccctc ttgatcagta ttgtccaatc tggcctgttc tttaaccagt
     3601 cagcctcttt tcctgcctct tgcatgggct ttttgttgtt gtttctttgt ttgttcatct
     3661 atcatctctt gctttaatca taacctaact ttccctgatg tggcacgtgt aaaactgaaa
     3721 aacagaaact ctatctggta aaaaaaaaaa ttccattaat ttatgctgtc agagaagagt
     3781 gatcctgttg ttatttacta atgaatagat acaaatttat tttctgaaat ggtttgtgaa
     3841 gattccagag cagaagttac agttttgtgg tttccacatg gctgtccctc tttttctaca
     3901 gtttttaaag ctctaatgag gaatttatgt tgcttaagaa gatttgtttt ttgaagtcta
     3961 aacttctgaa gcattcaaac aaaagacaca ttttacaagg gatttttatg gcctcttcat
     4021 taagttatgg aaataactaa agaattattt gctgaaggat ttgatgtcag atttaagtgt
     4081 gacctgctgg actggtaggc ttatttatgg tataatgatg gcctagtccc agtggtttgg
     4141 acatgttggt gaaaatcaaa atggataata acagacattg caatggtctc atatgtaatg
     4201 ttctagttgt gactagtttc ggttgttaat gtttttactt attcattaaa ataatttatt
     4261 acaa
//
