LOCUS       XM_017007670            1779 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens PR/SET domain 5 (PRDM5), transcript variant
            X11, mRNA.
ACCESSION   XM_017007670
VERSION     XM_017007670.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000004.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017007670.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="4"
     gene            1..1779
                     /gene="PRDM5"
                     /gene_synonym="BCS2; PFM2"
                     /note="PR/SET domain 5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 ESTs, 94 long SRA
                     reads, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 2 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:11107"
                     /db_xref="HGNC:HGNC:9349"
                     /db_xref="MIM:614161"
     CDS             119..1717
                     /gene="PRDM5"
                     /gene_synonym="BCS2; PFM2"
                     /codon_start=1
                     /product="PR domain zinc finger protein 5 isoform X11"
                     /protein_id="XP_016863159.1"
                     /db_xref="GeneID:11107"
                     /db_xref="HGNC:HGNC:9349"
                     /db_xref="MIM:614161"
                     /translation="MLGMYVPDRFSLKSSRVQDGMGLYTARRVRKGEKFGPFAGEKRM
                     PEDLDENMDYRLMWEVRGSKGEVLYILDATNPRHSNWLRFVHEAPSQEQKNLAAIQEG
                     ENIFYLAVEDIETDTELLIGYLDSDMEAEEEEQQIMTVIKEGEVENSRRQSTAGRKDR
                     LGCKEDYACPQCESSFTSEDILAEHLQTLHQKPTEEKEFKCKNCGKKFPVKQALQRHV
                     LQCTAKSSLKESSRSFQCSVCNSSFSSASSFEQHQETCRGDARFVCKADSCGKRLKSK
                     DALKRHQENVHTGDPKKKLICSVCNKKCSSASSLQEHRKIHEIFDCQECMKKFISANQ
                     LKRHMITHSEKRPYNCEICNKSFKRLDQVGAHKVIHSEDKPYKCKLCGKGFAHRNVYK
                     NHKKTHSEERPFQCEECKALFRTPFSLQRHLLIHNSERTFKCHHCDATFKRKDTLNVH
                     VQVVHERHKKYRCELCNKAFVTPSVLRSHKKTHTGEKEKICPYCGQKFASSGTLRVHI
                     RSHTGEAVQVLRVQQGLQPEARPG"
ORIGIN      
        1 atttcctcct tccctgccgg tttctcccct ctaccctggc accccaaatt tcgatgtgcc
       61 gcctgccggg cgctaagcgc cggtgttgag agaggcggcg gccgccgcgc ccgggaaaat
      121 gctgggcatg tacgtgccgg acaggttctc cctgaagtcc tcccgggttc aggacggcat
      181 ggggctctac acggcccgca gagtgcgaaa gggtgaaaag ttcggaccct ttgctggaga
      241 gaagagaatg cctgaagact tggatgaaaa tatggattac aggttgatgt gggaggttcg
      301 tgggagtaag ggagaagttt tgtacatttt ggatgctacc aacccacggc actccaactg
      361 gcttcgcttc gttcatgagg caccatctca ggagcagaag aacttggctg ccattcaaga
      421 aggagaaaac attttctatt tggcagttga agatatagaa acagacacgg agcttctgat
      481 tggctacctg gatagtgaca tggaggctga ggaggaagaa cagcaaatta tgacagtcat
      541 caaagaaggg gaagttgaaa attctagaag acaatcaaca gcgggcagaa aagatcgcct
      601 tggctgtaaa gaggactatg cttgtcctca atgtgaatcg agttttacca gtgaggatat
      661 tcttgctgag catctccaga cattgcacca gaaacccaca gaggagaaag aatttaagtg
      721 caagaactgt gggaagaaat tcccagttaa gcaggctttg caaagacatg ttcttcagtg
      781 cacagcgaaa agcagtctaa aggagtcttc gcgaagtttt cagtgctctg tttgcaattc
      841 ttccttcagt tcagcatcga gttttgagca gcaccaggag acttgccggg gggatgccag
      901 gtttgtgtgc aaggctgaca gctgtggaaa gaggctgaag agcaaggatg ccctgaaaag
      961 acaccaggaa aatgtccaca ctggagatcc taagaaaaag cttatatgtt cagtgtgcaa
     1021 taaaaagtgt tcttcagcat caagcctaca ggaacataga aagattcatg agatatttga
     1081 ttgtcaagaa tgtatgaaga aatttatttc agctaatcag ctaaaacgtc atatgatcac
     1141 ccactcagaa aaacgaccct ataattgcga gatttgtaat aagtctttca agaggcttga
     1201 tcaagtgggt gctcacaaag taatacacag cgaagacaaa ccttacaaat gcaaactttg
     1261 tggaaaggga tttgcccaca gaaatgttta caagaatcat aagaagaccc actctgagga
     1321 gagaccgttc caatgtgaag aatgtaaagc tttgttccgg accccatttt ctttacagag
     1381 acacctgcta atacataaca gtgagaggac tttcaagtgc catcactgcg atgctacctt
     1441 taagaggaag gatacattaa atgttcatgt ccaggtggtt catgaaagac acaagaagta
     1501 taggtgtgag ctatgtaata aggcctttgt tacaccttca gtgcttagaa gtcataagaa
     1561 aacacataca ggagaaaagg agaaaatctg tccatattgt ggccagaaat ttgccagcag
     1621 tggtacactc agagttcata tccggagcca cacaggagaa gccgtacaag tgctcagagt
     1681 gcagcaaggc cttcagccag aagcgaggcc tggatgagca caagaggacg cacactggag
     1741 aaaagccttt tcagtgtgat tatttttgaa attacaatc
//
