LOCUS       XM_011531564            5135 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens PR/SET domain 5 (PRDM5), transcript variant
            X3, mRNA.
ACCESSION   XM_011531564
VERSION     XM_011531564.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000004.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011531564.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5135
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="4"
     gene            1..5135
                     /gene="PRDM5"
                     /gene_synonym="BCS2; PFM2"
                     /note="PR/SET domain 5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 18 ESTs, 138 long SRA
                     reads, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 13 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:11107"
                     /db_xref="HGNC:HGNC:9349"
                     /db_xref="MIM:614161"
     CDS             119..1939
                     /gene="PRDM5"
                     /gene_synonym="BCS2; PFM2"
                     /codon_start=1
                     /product="PR domain zinc finger protein 5 isoform X3"
                     /protein_id="XP_011529866.1"
                     /db_xref="GeneID:11107"
                     /db_xref="HGNC:HGNC:9349"
                     /db_xref="MIM:614161"
                     /translation="MLGMYVPDRFSLKSSRVQDGMGLYTARRVRKGEKFGPFAGEKRM
                     PEDLDENMDYRLMWEVRGSKGEVLYILDATNPRHSNWLRFVHEAPSQEQKNLAAIQEG
                     ENIFYLAVEDIETDTELLIGYLDSDMEAEEEEQQIMTVIKEGEVENSRRQSTAGRKDR
                     LGCKEDYACPQCESSFTSEDILAEHLQTLHQKPTEEKEFKCKNCGKKFPVKQALQRHV
                     LQCTAKSSLKESSRSFQCSVCNSSFSSASSFEQHQETCRGDARFVCKADSCGKRLKSK
                     DALKRHQENVHTGDPKKKLICSVCNKKCSSASSLQEHRKIHEIFDCQECMKKFISANQ
                     LKRHMITHSDMRLSPLIFLIEKRPYNCEICNKSFKRLDQVGAHKVIHSEDKPYKCKLC
                     GKGFAHRNVYKNHKKTHSEERPFQCEECKALFRTPFSLQRHLLIHNSERTFKCHHCDA
                     TFKRKDTLNVHVQVVHERHKKYRCELCNKAFVTPSVLRSHKKTHTGEKEKICPYCGQK
                     FASSGTLRVHIRSHTGERPYQCPYCEKGFSKNDGLKMHIRTHTRVCDLAFSLKKMLIR
                     HKMTHNPNRPLAECQFCHKKFTRNDYLKVHMDNIHGVADS"
ORIGIN      
        1 atttcctcct tccctgccgg tttctcccct ctaccctggc accccaaatt tcgatgtgcc
       61 gcctgccggg cgctaagcgc cggtgttgag agaggcggcg gccgccgcgc ccgggaaaat
      121 gctgggcatg tacgtgccgg acaggttctc cctgaagtcc tcccgggttc aggacggcat
      181 ggggctctac acggcccgca gagtgcgaaa gggtgaaaag ttcggaccct ttgctggaga
      241 gaagagaatg cctgaagact tggatgaaaa tatggattac aggttgatgt gggaggttcg
      301 tgggagtaag ggagaagttt tgtacatttt ggatgctacc aacccacggc actccaactg
      361 gcttcgcttc gttcatgagg caccatctca ggagcagaag aacttggctg ccattcaaga
      421 aggagaaaac attttctatt tggcagttga agatatagaa acagacacgg agcttctgat
      481 tggctacctg gatagtgaca tggaggctga ggaggaagaa cagcaaatta tgacagtcat
      541 caaagaaggg gaagttgaaa attctagaag acaatcaaca gcgggcagaa aagatcgcct
      601 tggctgtaaa gaggactatg cttgtcctca atgtgaatcg agttttacca gtgaggatat
      661 tcttgctgag catctccaga cattgcacca gaaacccaca gaggagaaag aatttaagtg
      721 caagaactgt gggaagaaat tcccagttaa gcaggctttg caaagacatg ttcttcagtg
      781 cacagcgaaa agcagtctaa aggagtcttc gcgaagtttt cagtgctctg tttgcaattc
      841 ttccttcagt tcagcatcga gttttgagca gcaccaggag acttgccggg gggatgccag
      901 gtttgtgtgc aaggctgaca gctgtggaaa gaggctgaag agcaaggatg ccctgaaaag
      961 acaccaggaa aatgtccaca ctggagatcc taagaaaaag cttatatgtt cagtgtgcaa
     1021 taaaaagtgt tcttcagcat caagcctaca ggaacataga aagattcatg agatatttga
     1081 ttgtcaagaa tgtatgaaga aatttatttc agctaatcag ctaaaacgtc atatgatcac
     1141 ccactcagat atgagattgt ctccactcat ttttttaata gaaaaacgac cctataattg
     1201 cgagatttgt aataagtctt tcaagaggct tgatcaagtg ggtgctcaca aagtaataca
     1261 cagcgaagac aaaccttaca aatgcaaact ttgtggaaag ggatttgccc acagaaatgt
     1321 ttacaagaat cataagaaga cccactctga ggagagaccg ttccaatgtg aagaatgtaa
     1381 agctttgttc cggaccccat tttctttaca gagacacctg ctaatacata acagtgagag
     1441 gactttcaag tgccatcact gcgatgctac ctttaagagg aaggatacat taaatgttca
     1501 tgtccaggtg gttcatgaaa gacacaagaa gtataggtgt gagctatgta ataaggcctt
     1561 tgttacacct tcagtgctta gaagtcataa gaaaacacat acaggagaaa aggagaaaat
     1621 ctgtccatat tgtggccaga aatttgccag cagtggtaca ctcagagttc atatccggag
     1681 ccacacaggt gagcgtccct atcaatgtcc ttactgtgaa aaaggattca gtaaaaatga
     1741 tggactgaag atgcacattc gtactcacac cagggtttgt gatttggctt ttagcctgaa
     1801 gaaaatgctg attcgacaca agatgactca taatcccaat cgtcccctgg cagaatgcca
     1861 gttttgccat aagaagttta caaggaatga ctacctcaaa gtgcacatgg acaatatcca
     1921 tggtgtagct gacagctaat aggggctgta aaggaattaa actattcaga agggctccta
     1981 atatgaatcc cagattttta tcacctgatc agcataacag aagtagccaa aagtgactta
     2041 ctggtctcat agttcttatt tgcctacatt tagagtctgt agatgcatat gcaaccaaaa
     2101 aaaagtctta cttttaacaa gaaatggtat aaatggaaaa aaaatacaac tccatagcct
     2161 tgcaaaatgc aacttgtgct ctgtcttata aaaatggaga aaggagtcat ggctctcttt
     2221 cttggccatc cctctgtaat gaagtttata atatacttcc ctaataggcc tttttatttt
     2281 attgttattc tttgtgtgtc tgtgtgtctg tgtgtctgta tgtgtctgtg tgtgtgcact
     2341 cacttgcaaa tgccagttgt tgcagctggt tttaccaatt taaatagaaa taaatcaaga
     2401 tatccaacta tttctttgca gatgaggata agaataagtt atcaaagtct caagtttgat
     2461 aggaaaataa atagttgcta ttttataaga caaaccaaga gctgagctta tctaatagct
     2521 ctgtgcaaca aatgagttta aaatagatat ttgataacta aaacatctat taaaatattg
     2581 ctcattttag aggattctta ggaaacatta tttattctca tcattcagat gcagacattc
     2641 atggtctgga atacttttat aagttctaca caaaaatgac catcacattt aaatattcag
     2701 caggctaccc ctcttgaatt tagaccattt agctttagaa attaacagta taccaatata
     2761 tataattaaa aatagaaacc aaatagattc tctgtatttg gcaacagagt ggcagaacaa
     2821 tagtggcatc tccacatttg ttaggatgaa catagccctt tcccctctcc ttccataaaa
     2881 gtgcacagaa catgttagtg cagatacagt cctcagaaca ttaacattcc attttgcaaa
     2941 agacattttc cagaatcttg gcagtaggta attctgaaac acttttgaat taccttcaat
     3001 catcccatat aattaggaat ccagaataca aagtacaaac ttggcaattg ttatgattga
     3061 aactgtcact gatgcttaag ggaaattgaa gcaagaagca taatttcttc ctttaggtta
     3121 tatttcagca aaatacttga cagcaacata caatgaacag cttgtttgga gagatgatat
     3181 gatacaatgt aatagtgatg tcaaaataac ctggaggaat atccaaaaac cagaaaaacg
     3241 ttaaaatgaa gcccaactca tgaacctctc taactgaagc ccagtcaaaa gaaaggaagt
     3301 atagttttaa ggaagttatt tggttctaat gagttaagga gaaaggttat ctgagacaca
     3361 gttctttgac ttcaggaatc tcattttaga attatattca tgcccagttc cagttttaaa
     3421 aagaaacata aagattcaat gtagacattt gaatgttgta aaatactaaa tttgaaactc
     3481 agaagagata acttttaaaa acataaatcc taaaattata gtttagaaga tatttaagta
     3541 tagttatatg tagtattttg aatctgaaat tatagactgt attttataaa aataaatttt
     3601 ggtcttgttt ctcactatat catttgtttc aacaatatat ttttagatct aaagtgtttt
     3661 cattttaata tgatagtgtg tttaatatca tttgaatata aaaagacagc tgtaaaattt
     3721 gatagtgtgt attatttaag cacatcctgt atatttcttt gaatgctgct ttctctatat
     3781 gggatgcttt atatcccgat tatgtgatga atgtaaaact tgaaaggagt ccaaattcca
     3841 attttgtgta atctcagtga gtcacagttc acatggctgc tggggaaatt accctgaaaa
     3901 ctgtggtgtc gctatgctgt ggagtaaaca gacaggcaag aggtgctggg ctttatcctg
     3961 ctgaaggttt atagacatgg aaatctttag aaaatggtgt agaaggacct acaccagaga
     4021 gtggtacacc actctctcct ttcagaggac tgaaaccaaa acaagtcctt agtagactat
     4081 ttgtatgctg taaattttta tccaaaagac aagtattcat gggtagtttc agatatatta
     4141 gcatttgctt gctaaaactt ttaaattact tagtaataac caaaaaaaga cactatttta
     4201 ggcatgattg atcaattgaa agcatagata atcataagga aaagtcttac agacaagctg
     4261 aagtacaggt acctactttg aaatgtcttc tgtttcctgc tgtgaaagat tttggctggg
     4321 gtattttctt gagaaaagac cagaccctta ggtgcctata aagtctaagt aattgagact
     4381 tagaaattgg ctaagtaaat ttaagagacg ttcaataatg taggtgggtt cagataccct
     4441 tttataataa ctgtcttctt agtatattaa cactcaagat gtttgtgtat ctttaatttg
     4501 cctttgtttc acaataactg gcttttgttt tccttttcat ggtgtgttgt tggctatata
     4561 gaggcattta ttggtaaatt ataatcagca gttgcaccat ggaagtattc ttggtgataa
     4621 attcttgggg ttacatagta tagttaacat gttattttca agaaacatga gtgtgtgtgt
     4681 ctgtgtgtgt gtgtctgaag agtatcactt atatgcagtg catatacatg taagtgcatt
     4741 actttgctca aatatcttct gacctattac agtcaactca tgcatgagtg tgaacatgta
     4801 ttacagaagg tcttacagcc ttagtttctg ttttagattt tatgtgctgc ttcctttctc
     4861 aaacaaaagc atgaaaggaa agaggataag tactagaaat attcattttt ttccttcaca
     4921 aatctaaatg ttgcttatga aaactcatct tagagtaatg aatatgtgga agtgggtagg
     4981 taggaggaaa tgtgcctctt taaaatccta aaattttacc attgatattg acatttgttt
     5041 gcgtgtatat aaatggagca tgtgtaaata tagaattcca atagcatttt ttattttatt
     5101 ataaatctat aataaatata tataaatcac tacca
//
